Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_P04
         (823 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           25   2.8  
CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.           24   4.9  
CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.          24   4.9  
AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic acetylch...    24   4.9  
Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein ...    23   8.6  

>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 25.0 bits (52), Expect = 2.8
 Identities = 13/33 (39%), Positives = 15/33 (45%)
 Frame = -2

Query: 222  SCRRGAGILFPTTACHGPHSLRGRDSWTPEGSH 124
            SC R AG  F  T+     S   R S +  GSH
Sbjct: 1330 SCERIAGETFECTSTSSKFSTSSRGSGSDSGSH 1362


>CR954257-2|CAJ14153.1| 1664|Anopheles gambiae Tubby protein.
          Length = 1664

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 11/33 (33%), Positives = 17/33 (51%), Gaps = 2/33 (6%)
 Frame = +3

Query: 534 WGENDRGVSFTFGTEVVGKFLSKH--EFDLICR 626
           WG ND+ +    GT+V   ++S+      L CR
Sbjct: 322 WGHNDKRIFIATGTQVHIAWVSRRVASLQLFCR 354


>CR954256-3|CAJ14144.1|  659|Anopheles gambiae cyclin protein.
          Length = 659

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 21/55 (38%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
 Frame = -2

Query: 639 RPGARDRSSRTRVWTRTCPRLRFQK*S*LRDRSRPNRPCPCRG--RTRASRRANP 481
           R  +R RS  +R  +RT       K    R RSR   P P RG  R R +RR  P
Sbjct: 426 RSVSRSRSRGSRSRSRTSQSRSRSKTRTSRSRSRT--PLPARGHVRARLTRRTIP 478


>AY705401-1|AAU12510.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 24.2 bits (50), Expect = 4.9
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 4/54 (7%)
 Frame = +1

Query: 223 LNIPRISFFYAETTSVP----ASIGFMGFTMSAKGGITLNYGRRSQTASTVFPL 372
           + I R + +Y     VP    +S+  +GFT+    G  L  G     + TVF L
Sbjct: 225 IQIRRRTLYYFFNLIVPCVLISSMALLGFTLPPDSGEKLTLGLTILVSQTVFSL 278


>Z69980-1|CAA93820.1|  134|Anopheles gambiae GTP-binding protein
           protein.
          Length = 134

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -2

Query: 153 RDSWTPEGSHHTQTT 109
           ++ W PE +HH Q T
Sbjct: 37  KEKWVPEITHHCQKT 51


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 898,896
Number of Sequences: 2352
Number of extensions: 20333
Number of successful extensions: 48
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87318630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)