Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_P03
         (835 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_1319 + 26117353-26117784                                         29   4.6  
07_03_0579 + 19649978-19650442                                         29   4.6  
07_03_0568 - 19593265-19593729                                         29   4.6  
10_08_0100 + 14788426-14789097                                         28   8.0  
01_04_0082 + 15835137-15836312                                         28   8.0  

>08_02_1319 + 26117353-26117784
          Length = 143

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 16/50 (32%), Positives = 24/50 (48%)
 Frame = +1

Query: 421 CQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQTRPRQGICARTL 570
           C   PL    D +GTS     L ++ +   P TCP++  RP     +RT+
Sbjct: 76  CTGKPLEMLLD-RGTSKPDKYLKAKSDSVRPRTCPAKSGRPPGASSSRTV 124


>07_03_0579 + 19649978-19650442
          Length = 154

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 448 RDCQGTSSRTATLPSRKEGALPSTCPSRQTRPRQGICARTLPRLKRKFM 594
           RD    + R A    + +G  P+  P+    PR     ++LPRLK + +
Sbjct: 91  RDDPFRAVRVAVKDVKLQGPRPAPTPANMAAPRPTTAGKSLPRLKMQML 139


>07_03_0568 - 19593265-19593729
          Length = 154

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = +1

Query: 448 RDCQGTSSRTATLPSRKEGALPSTCPSRQTRPRQGICARTLPRLKRKFM 594
           RD    + R A    + +G  P+  P+    PR     ++LPRLK + +
Sbjct: 91  RDDPFRAVRVAVKDVKLQGPRPAPTPANMAAPRPTTAGKSLPRLKMQML 139


>10_08_0100 + 14788426-14789097
          Length = 223

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 16/46 (34%), Positives = 20/46 (43%)
 Frame = +1

Query: 385 PRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTC 522
           PR  A SP  PR   C      DCQ  + R+A  P+R   +    C
Sbjct: 178 PRRPAPSPASPRLPMCSYTCTVDCQTRNVRSA--PTRPSSSTDGGC 221


>01_04_0082 + 15835137-15836312
          Length = 391

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 653 TGKYFFLYWVRSGHVHFDWNM 591
           TG    L W R G+ H DWN+
Sbjct: 277 TGGRTLLVWARDGYPHGDWNL 297


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,552,044
Number of Sequences: 37544
Number of extensions: 358295
Number of successful extensions: 906
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 869
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 900
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)