Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_P03
         (835 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.       29   0.17 
U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles ...    29   0.23 
AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical prot...    26   1.6  
U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.            25   3.8  
AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.         23   8.7  
AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein ...    23   8.7  

>AF008575-1|AAB87764.1|  525|Anopheles gambiae chitinase protein.
          Length = 525

 Score = 29.1 bits (62), Expect = 0.17
 Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 9/64 (14%)
 Frame = -1

Query: 562 WHIYLDGDGSVDW---DMYWVRHLLFDWVGL------RYVNWYLDNLFNWVRDMFDNGVG 410
           W +Y  G+G  D    D     HL++ + G+      R ++ YLD   NW R      VG
Sbjct: 40  WAVYRPGNGRYDIEHIDPSLCTHLMYGFFGINEDATVRIIDPYLDLEENWGRGHIKRFVG 99

Query: 409 LGNV 398
           L NV
Sbjct: 100 LKNV 103


>U50468-1|AAA93472.1|   91|Anopheles gambiae protein ( Anopheles
           gambiae putativetubulin alpha chain mRNA, complete cds.
           ).
          Length = 91

 Score = 28.7 bits (61), Expect = 0.23
 Identities = 18/61 (29%), Positives = 29/61 (47%)
 Frame = +1

Query: 355 PYPXRKENPLPRESARSPTLPRCQTCPLPS*RDCQGTSSRTATLPSRKEGALPSTCPSRQ 534
           P   R E  + R +  SP L +  TCP+P    C    SR +++  R   A  ++C +R 
Sbjct: 37  PRTRRSEAVMTRSTPSSPRLAQASTCPVP----CSSIWSRPSSM--RCAPARTASCSTRS 90

Query: 535 T 537
           +
Sbjct: 91  S 91


>AJ439060-16|CAD27767.1|  278|Anopheles gambiae hypothetical protein
           protein.
          Length = 278

 Score = 25.8 bits (54), Expect = 1.6
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +3

Query: 621 PYPVEKKVLTRKGXVHVPAPYPVYKEVQVPXKV-MWTDLPVHIPXXAYPSKTRPY 782
           P+PV   V      V++P PYP+   V+ P K+ ++  +P  I      +  +PY
Sbjct: 179 PHPVPIAV-PHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPY 232



 Score = 23.4 bits (48), Expect = 8.7
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = +1

Query: 355 PYPXRKENPLPRESARSPTLPRCQTCPLP 441
           PYP   E P P E  +   +P  +  P+P
Sbjct: 231 PYPIEVEKPFPVEVLKKFEVPVPKPYPVP 259


>U43500-1|AAA93303.1|  280|Anopheles gambiae a-CD36 protein.
          Length = 280

 Score = 24.6 bits (51), Expect = 3.8
 Identities = 12/25 (48%), Positives = 16/25 (64%)
 Frame = -1

Query: 559 HIYLDGDGSVDWDMYWVRHLLFDWV 485
           +I+L  DGS+ W    VR LLF+ V
Sbjct: 78  NIFLKTDGSLLWKNKPVRELLFEGV 102


>AY239359-1|AAO73809.1| 2259|Anopheles gambiae dicer-1 protein.
          Length = 2259

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +3

Query: 399 TFPNPTPLSNMSLTQLKRLSRYQFTYRNPTQS 494
           TF   TP+   + T  K    YQ+T R P  S
Sbjct: 798 TFTKLTPIWRCATTVRKGRKLYQYTIRLPINS 829


>AF002238-1|AAB97731.1|  327|Anopheles gambiae ribosomal protein L5
           protein.
          Length = 327

 Score = 23.4 bits (48), Expect = 8.7
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 487 PSRKEGALPSTCPSRQTRPRQGICARTLPRLKRKFMFQS 603
           P+R+     ST P+   R R     + LPR +R F F S
Sbjct: 275 PARRRSR--STRPTSWPRSRPTSKPKRLPRRRRPFFFSS 311


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 650,524
Number of Sequences: 2352
Number of extensions: 12533
Number of successful extensions: 70
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 70
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 88065063
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)