Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_O23
         (990 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49068-9|CAA88860.1|  556|Caenorhabditis elegans Hypothetical pr...    61   1e-09
AF036703-3|AAB88556.2|  424|Caenorhabditis elegans Hypothetical ...    32   0.73 
Z93397-6|CAB07718.2|  550|Caenorhabditis elegans Hypothetical pr...    31   1.3  
AY954523-1|AAX34431.1|  729|Caenorhabditis elegans anion transpo...    29   5.1  
AY887907-1|AAX34419.1|  729|Caenorhabditis elegans anion transpo...    29   5.1  
AC006625-1|AAK68277.2|  729|Caenorhabditis elegans Sulfate perme...    29   5.1  
AL032631-15|CAA21579.1|  137|Caenorhabditis elegans Hypothetical...    28   8.9  

>Z49068-9|CAA88860.1|  556|Caenorhabditis elegans Hypothetical
           protein K01C8.9 protein.
          Length = 556

 Score = 60.9 bits (141), Expect = 1e-09
 Identities = 31/62 (50%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
 Frame = +1

Query: 178 MAKFKLKKPSKRQPARLRYKIEKKVKEHNRK-QRXXXXXXXXXXXXXPIQIPNICPFKED 354
           MAK+ LKK SKR     RYKIEKKV++HNRK ++              I +PN CPFKE+
Sbjct: 1   MAKYCLKKTSKRVSCAKRYKIEKKVRDHNRKVKKEAKKNGTTNKKEKTISVPNSCPFKEE 60

Query: 355 IL 360
           IL
Sbjct: 61  IL 62


>AF036703-3|AAB88556.2|  424|Caenorhabditis elegans Hypothetical
           protein T11F8.2 protein.
          Length = 424

 Score = 31.9 bits (69), Expect = 0.73
 Identities = 12/39 (30%), Positives = 21/39 (53%)
 Frame = -1

Query: 348 FKWTYIRNLNWLGFLRFRILFSFFTLLTIMLFHFFFYFV 232
           FKW+Y++  + + FL F  L  F+      +  +F +FV
Sbjct: 261 FKWSYMKGTHTISFLSFMALLCFYNFQRSPMTTYFAFFV 299


>Z93397-6|CAB07718.2|  550|Caenorhabditis elegans Hypothetical
           protein ZC482.4 protein.
          Length = 550

 Score = 31.1 bits (67), Expect = 1.3
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = +1

Query: 100 DNTYFIY*LTYGVTVKVSFLLYIHSDMAKFKLKKPSKRQPARLRYKIEKKVK 255
           +++++I   TYGV ++ +  L  +S + K  L KPSKR+     Y+IE   K
Sbjct: 106 NSSFWIACATYGVFIRNNTQLVDYSILDKIHLYKPSKRE--ECEYRIENNPK 155


>AY954523-1|AAX34431.1|  729|Caenorhabditis elegans anion
           transporter SULP-1b protein.
          Length = 729

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 357 YVFFKWTYIRNLNWLGFLRFRILFSFFTLLTIMLFHFFF 241
           ++ FKW   R L  +  + F     FF LLT+ L  FFF
Sbjct: 260 FIIFKWRLSRFL--ISKIGFSAPHEFFVLLTVTLIIFFF 296


>AY887907-1|AAX34419.1|  729|Caenorhabditis elegans anion
           transporter SULP-1a protein.
          Length = 729

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 357 YVFFKWTYIRNLNWLGFLRFRILFSFFTLLTIMLFHFFF 241
           ++ FKW   R L  +  + F     FF LLT+ L  FFF
Sbjct: 260 FIIFKWRLSRFL--ISKIGFSAPHEFFVLLTVTLIIFFF 296


>AC006625-1|AAK68277.2|  729|Caenorhabditis elegans Sulfate permease
           family protein 1 protein.
          Length = 729

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 15/39 (38%), Positives = 20/39 (51%)
 Frame = -1

Query: 357 YVFFKWTYIRNLNWLGFLRFRILFSFFTLLTIMLFHFFF 241
           ++ FKW   R L  +  + F     FF LLT+ L  FFF
Sbjct: 260 FIIFKWRLSRFL--ISKIGFSAPHEFFVLLTVTLIIFFF 296


>AL032631-15|CAA21579.1|  137|Caenorhabditis elegans Hypothetical
           protein Y106G6H.16 protein.
          Length = 137

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 11/29 (37%), Positives = 17/29 (58%)
 Frame = -1

Query: 306 LRFRILFSFFTLLTIMLFHFFFYFVSKTC 220
           LR  +L   FTLL ++ +HF+F  +   C
Sbjct: 104 LRCTVLIIIFTLLCLIAYHFYFLRLPTRC 132


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,554,486
Number of Sequences: 27780
Number of extensions: 156913
Number of successful extensions: 390
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 389
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2584172786
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)