Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_O17
(858 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1al... 34 0.002
X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alp... 33 0.003
AF069739-1|AAC63272.2| 690|Apis mellifera translation initiatio... 30 0.024
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 25 0.68
EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor 1-a... 24 1.6
AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor 1-a... 24 1.6
DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholi... 22 6.3
AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein. 22 6.3
D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein. 22 8.3
AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor pr... 22 8.3
AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase pro... 22 8.3
>AF015267-1|AAC38959.1| 461|Apis mellifera elongation factor-1alpha
F2 protein.
Length = 461
Score = 33.9 bits (74), Expect = 0.002
Identities = 32/110 (29%), Positives = 51/110 (46%)
Frame = +2
Query: 140 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 319
N+ VI HVD GKST T L+ K G I R E +F + E + + K + +
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF-EKEAQEMGKG-SFKYAWVLDKLK 64
Query: 320 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 469
E + + I + ++ K + + +ID+PGH DF + D A+
Sbjct: 65 AERERGITIDIALWKFETSK-YYVTIIDAPGHRDFIKNMITGTSQADCAV 113
>X52884-1|CAA37066.1| 461|Apis mellifera elongation factor 1 alpha
protein.
Length = 461
Score = 33.5 bits (73), Expect = 0.003
Identities = 32/110 (29%), Positives = 51/110 (46%)
Frame = +2
Query: 140 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 319
N+ VI HVD GKST T L+ K G I R E +F + E + + K + +
Sbjct: 9 NIVVIGHVDSGKSTTTGHLIYKCGGI-DKRTIE-KF-EKEAQEMGKG-SFKYAWVLDKLK 64
Query: 320 LEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTDGAL 469
E + + I + ++ K + + +ID+PGH DF + D A+
Sbjct: 65 AERERGITIDIALWKFETAK-YYVTIIDAPGHRDFIKNMITGTSQADCAV 113
>AF069739-1|AAC63272.2| 690|Apis mellifera translation initiation
factor 2 protein.
Length = 690
Score = 30.3 bits (65), Expect = 0.024
Identities = 17/68 (25%), Positives = 29/68 (42%)
Frame = +2
Query: 374 EKGFLINLIDSPGHVDFSSEVTAALRVTDGALXXXXXXXXXXXQTETVLRQAIAERIKPI 553
E G + +D+PGH F S +TD + QT + A ++ I
Sbjct: 190 ESGERVTFLDTPGHAAFISMRHRGAHITDIVVLVVAADDGVKEQTLQSIEMAKDAKVPII 249
Query: 554 LFMNKMDR 577
+ +NK+D+
Sbjct: 250 VAINKIDK 257
Score = 29.5 bits (63), Expect = 0.041
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +2
Query: 143 MSVIAHVDHGKSTLTDSL 196
++++ HVDHGK+TL D+L
Sbjct: 148 VTIMGHVDHGKTTLLDAL 165
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 25.4 bits (53), Expect = 0.68
Identities = 9/19 (47%), Positives = 13/19 (68%)
Frame = +2
Query: 140 NMSVIAHVDHGKSTLTDSL 196
N+ I HV HGKST+ ++
Sbjct: 44 NIGTIGHVAHGKSTIVKAI 62
>EF013389-1|ABK54743.1| 172|Apis mellifera elongation factor
1-alpha protein.
Length = 172
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 383 FLINLIDSPGHVDFSSEVTAALRVTDGAL 469
+ + +ID+PGH DF + D A+
Sbjct: 12 YYVTIIDAPGHRDFIKNMITGTSQADCAV 40
>AY208278-1|AAO48970.1| 274|Apis mellifera elongation factor
1-alpha protein.
Length = 274
Score = 24.2 bits (50), Expect = 1.6
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 383 FLINLIDSPGHVDFSSEVTAALRVTDGAL 469
+ + +ID+PGH DF + D A+
Sbjct: 28 YYVTIIDAPGHRDFIKNMITGTSQADCAV 56
>DQ026038-1|AAY87897.1| 520|Apis mellifera nicotinic acetylcholine
receptor beta1subunit protein.
Length = 520
Score = 22.2 bits (45), Expect = 6.3
Identities = 6/14 (42%), Positives = 10/14 (71%)
Frame = -3
Query: 121 VHHPTDLVYREIHH 80
+HHP + R++HH
Sbjct: 400 LHHPNCKINRKVHH 413
>AY569702-1|AAS86655.1| 400|Apis mellifera feminizer protein.
Length = 400
Score = 22.2 bits (45), Expect = 6.3
Identities = 13/44 (29%), Positives = 18/44 (40%)
Frame = -3
Query: 523 TQYCFSLYTHTRHTVNNHKGSISDTECSCYFRREINVSR*VNQV 392
T C S Y +RH N + + CS RE R +Q+
Sbjct: 227 TSSCHSRYEDSRHEDRNSYRNDGERSCSRDRSREYKKDRRYDQL 270
>D79208-1|BAA11466.1| 567|Apis mellifera alpha-glucosidase protein.
Length = 567
Score = 21.8 bits (44), Expect = 8.3
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 302 ISMFFELEEKDLVFITNPDQREKSEKGFLI 391
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
>AM076717-1|CAJ28210.1| 501|Apis mellifera serotonin receptor
protein.
Length = 501
Score = 21.8 bits (44), Expect = 8.3
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
Frame = -1
Query: 486 TQSTTTRAP-SVTRSAAVTSEEKSTC 412
+ STTT +P + T+S V + STC
Sbjct: 324 SSSTTTTSPMTSTKSTIVRNHLNSTC 349
>AB253417-1|BAE86928.1| 567|Apis mellifera alpha-glucosidase
protein.
Length = 567
Score = 21.8 bits (44), Expect = 8.3
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = +2
Query: 302 ISMFFELEEKDLVFITNPDQREKSEKGFLI 391
++MF+ D+ I+N +Q + S GF I
Sbjct: 527 LNMFYNNFNSDIKSISNNEQVKVSALGFFI 556
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 172,440
Number of Sequences: 438
Number of extensions: 3431
Number of successful extensions: 21
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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