Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_O15
(840 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1262 + 35312313-35312343,35312840-35312886,35313614-353136... 144 6e-35
02_01_0599 - 4455151-4455915,4455999-4456098,4456176-4456222,445... 125 5e-29
04_04_0697 + 27331643-27331693,27331798-27331917,27332007-273320... 42 6e-04
02_05_0168 + 26423464-26423790,26423828-26423941,26424366-264244... 37 0.023
11_03_0146 + 10744403-10744603,10745199-10745834,10745967-107461... 33 0.21
06_03_0237 + 18576317-18576412,18577273-18577778,18577906-185780... 31 0.86
03_05_0311 + 23014666-23014806,23015454-23015959,23016661-230170... 31 1.1
01_01_0449 + 3335408-3335479,3336310-3336389,3336911-3336989,333... 31 1.5
02_01_0079 + 554635-556098 30 2.6
01_06_1237 + 35630146-35630642,35632617-35632950,35633583-35633909 30 2.6
01_01_0484 - 3558941-3559303,3559439-3559560,3560596-3560743,356... 29 4.6
04_04_0388 + 24873624-24873806,24873908-24873979,24874088-248741... 28 8.1
>02_05_1262 +
35312313-35312343,35312840-35312886,35313614-35313660,
35313740-35313842,35313924-35314691
Length = 331
Score = 144 bits (350), Expect = 6e-35
Identities = 80/185 (43%), Positives = 107/185 (57%), Gaps = 3/185 (1%)
Frame = +1
Query: 154 WLXLESDPGLFTLLLEDFGVKGVQVEEIYDLHKPLKS---PVYGFIFLFRWIEERRSRRK 324
W +ESDPG+FT L+++ VKGVQVEE+Y L S PVYG IFLF+W+ + R
Sbjct: 3 WCTIESDPGVFTELIQEMQVKGVQVEELYSLDVDSISELRPVYGLIFLFKWMAGEKDERP 62
Query: 325 FVEQIESFVRDEETINNIFFAQQMVPNGCATHALLSILLNCPNLHLGETLSRLKHHTVGM 504
V+ N+FFA Q++PN CAT A+LSIL+N P + +G LS LK T
Sbjct: 63 VVKDPNP---------NLFFASQVIPNACATQAILSILMNRPEIDIGPELSNLKEFTGAF 113
Query: 505 NPENKGWAIGNTPELACAHNSHAIPQARKKTDKNAGVSTGRFTGEXYHFVSLVPINGHLF 684
P+ KG AI N+ + AHNS A P+ ++ A G+ E YHF+S +P G L+
Sbjct: 114 APDMKGLAINNSDSIRTAHNSFARPEPFVSDEQRA---AGK-DDEVYHFISYLPFEGVLY 169
Query: 685 ELXGL 699
EL GL
Sbjct: 170 ELDGL 174
>02_01_0599 -
4455151-4455915,4455999-4456098,4456176-4456222,
4456566-4456612,4457299-4457461,4458013-4458042
Length = 383
Score = 125 bits (301), Expect = 5e-29
Identities = 69/185 (37%), Positives = 106/185 (57%), Gaps = 3/185 (1%)
Frame = +1
Query: 154 WLXLESDPGLFTLLLEDFGVKGVQVEEIYDLHKPLKS---PVYGFIFLFRWIEERRSRRK 324
W +E+DPG+FT LL+ +KG+QV+E+Y L + PVYG I L++W + R
Sbjct: 57 WAAIENDPGIFTELLQQMQLKGLQVDELYSLDLDALNDLQPVYGLIVLYKWQPPEKDERP 116
Query: 325 FVEQIESFVRDEETINNIFFAQQMVPNGCATHALLSILLNCPNLHLGETLSRLKHHTVGM 504
++ I N+FFA+Q++ N CAT A++S+LLN P + L E L +LK +
Sbjct: 117 I----------KDPIPNLFFAKQIINNACATQAIVSVLLNSPGITLSEELKKLKEFAKDL 166
Query: 505 NPENKGWAIGNTPELACAHNSHAIPQARKKTDKNAGVSTGRFTGEXYHFVSLVPINGHLF 684
P+ KG AI N+ + A NS A P+ + ++ + V + YHF+S VP++G L+
Sbjct: 167 PPDLKGLAIVNSESIRLASNSFARPEVPE--EQKSSVK----DDDVYHFISYVPVDGVLY 220
Query: 685 ELXGL 699
EL GL
Sbjct: 221 ELDGL 225
>04_04_0697 +
27331643-27331693,27331798-27331917,27332007-27332057,
27332682-27332787,27333218-27333276,27333372-27333446,
27333909-27333957,27334064-27334140,27334400-27334483
Length = 223
Score = 41.9 bits (94), Expect = 6e-04
Identities = 38/187 (20%), Positives = 75/187 (40%), Gaps = 4/187 (2%)
Frame = +1
Query: 154 WLXLESDPGLFTLLLEDFGVKG-VQVEEIYDLHKPLKSPVYGFIFLFRWIEERRSRRKFV 330
WL LE++P + + GV ++Y L + + V + + + +++ V
Sbjct: 5 WLPLEANPEVMNQFMRGLGVPAEAGFCDVYGLDDEMLAMVPQPVLAVILLYPQDRKKESV 64
Query: 331 EQIESFVRDEETINNIFFAQQMVPNGCATHALLSILLNCPN---LHLGETLSRLKHHTVG 501
S V ++ N++F +Q + N C T ++ + N + L G R T
Sbjct: 65 ASPSSTVESKKLSKNVYFTKQTIGNACGTVGIIHAIGNALSRIKLVEGSYFDRFYKQTAD 124
Query: 502 MNPENKGWAIGNTPELACAHNSHAIPQARKKTDKNAGVSTGRFTGEXYHFVSLVPINGHL 681
M+P + + E+ +H++ + T+ GV H+V ++ +
Sbjct: 125 MDPAQRASFLEEDEEM---EKAHSVAVSAGDTEAKDGV--------IEHYVCFSCVDDEI 173
Query: 682 FELXGLN 702
FEL G N
Sbjct: 174 FELDGGN 180
>02_05_0168 +
26423464-26423790,26423828-26423941,26424366-26424448,
26424756-26424804,26425789-26425894,26426460-26426518,
26426604-26426678,26427112-26427160,26427253-26427329,
26427662-26427744,26427852-26427867
Length = 345
Score = 36.7 bits (81), Expect = 0.023
Identities = 28/110 (25%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Frame = +1
Query: 376 IFFAQQMVPNGCATHALLSILLNCPN---LHLGETLSRLKHHTVGMNPENKGWAIGNTPE 546
++F +Q V N C T ++ + N + L G R TV M+P + + E
Sbjct: 197 VYFTKQTVGNACGTVGVIHAIGNAASKLKLVEGSYFDRFYKQTVDMDPVQRAAFLEEDDE 256
Query: 547 LACAHNSHAIPQARKKTDKNAGVSTGRFTGEXYHFVSLVPINGHLFELXG 696
+ ++H++ + TD N V+ HFV ++G L+EL G
Sbjct: 257 M---EDAHSVAASAGDTDANVEVNE--------HFVCFSCVDGELYELDG 295
>11_03_0146 + 10744403-10744603,10745199-10745834,10745967-10746125,
10746398-10747036,10748018-10748151,10748281-10748464,
10748882-10749217,10751659-10751945,10752863-10753253,
10753351-10753615,10753740-10753818,10754123-10754543
Length = 1243
Score = 33.5 bits (73), Expect = 0.21
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Frame = -3
Query: 580 VVWHVSCGHK-PTQVYF-----LLP--ILCFQDSYPLYDVLT-YLMFLLNEDLDSLVKWK 428
VVWH+ H P F + P +LC +Y Y+ T + F+ DL+ K
Sbjct: 858 VVWHILNHHSDPLNTIFSRDAQIEPDMMLCINQTYTPYEFETSWDQFIKRYDLEGCPTMK 917
Query: 427 VKHEWRNRWVPFAVQKKY 374
++ R++WVP +K+Y
Sbjct: 918 ALYDIRDKWVPAFSRKEY 935
>06_03_0237 +
18576317-18576412,18577273-18577778,18577906-18578024,
18578409-18578763,18578803-18578866,18578967-18579231,
18579354-18579529
Length = 526
Score = 31.5 bits (68), Expect = 0.86
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Frame = -3
Query: 574 WHV-SCGHKPTQVYF-----LLP--ILCFQDSYPLYDVLT-YLMFLLNEDLDSLVKWKVK 422
WH+ +C P F + P +LC +Y Y+ T + FL DL+ K
Sbjct: 264 WHILNCHSDPLNTIFERNEQIEPDMMLCINQTYKPYEFETSWDQFLKRYDLEGCPIMKAL 323
Query: 421 HEWRNRWVPFAVQKKY 374
++ R +WVP +K Y
Sbjct: 324 YDIREKWVPAFFRKDY 339
>03_05_0311 +
23014666-23014806,23015454-23015959,23016661-23017051,
23017192-23017292,23017542-23017644,23018048-23018120,
23018244-23018659
Length = 576
Score = 31.1 bits (67), Expect = 1.1
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Frame = -3
Query: 523 ILCFQDSYPLYDVLT-YLMFLLNEDLDSLVKWKVKHEWRNRWVPFAVQKKY 374
+LC +Y Y+ T + F+ + DL+ K ++ R +WVP +K+Y
Sbjct: 242 MLCINQTYTPYEFETSWDQFIKSYDLEGCPIMKALYDIREKWVPAFFKKEY 292
>01_01_0449 +
3335408-3335479,3336310-3336389,3336911-3336989,
3337342-3337423,3337820-3337976,3338660-3338717,
3338718-3338828,3339211-3339257,3339820-3339948,
3340750-3340834,3341264-3341344,3341881-3341886
Length = 328
Score = 30.7 bits (66), Expect = 1.5
Identities = 25/106 (23%), Positives = 42/106 (39%)
Frame = +1
Query: 328 VEQIESFVRDEETINNIFFAQQMVPNGCATHALLSILLNCPNLHLGETLSRLKHHTVGMN 507
+E++E+ V + N + AQQM + A + L ++ L +LKH V
Sbjct: 26 IEKLENMVAE----GNYYEAQQMYKSTGARYIAAQKYLEALDILQSGALVQLKHGQVTCG 81
Query: 508 PENKGWAIGNTPELACAHNSHAIPQARKKTDKNAGVSTGRFTGEXY 645
E + + A +N + RK D +S F G+ Y
Sbjct: 82 GELAIMFVDTLVKAALPYNEETFDRIRKMYDAFPRISVPHFLGDDY 127
>02_01_0079 + 554635-556098
Length = 487
Score = 29.9 bits (64), Expect = 2.6
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
Frame = +1
Query: 208 GVKGVQVEEIYDLHK-PLKSPVY--GFIFLFRWIEERRSRRKFVEQIESFVRDEETINNI 378
GV +EE+ LH PL S V G+ L+R++E+ + + + E + EE INNI
Sbjct: 227 GVIPQPLEELL-LHSFPLPSFVVKPGYDLLYRFVEKHGAAAVSIAEKEHGISKEEAINNI 285
Query: 379 FF 384
F
Sbjct: 286 LF 287
>01_06_1237 + 35630146-35630642,35632617-35632950,35633583-35633909
Length = 385
Score = 29.9 bits (64), Expect = 2.6
Identities = 16/29 (55%), Positives = 20/29 (68%)
Frame = +1
Query: 142 LTEGWLXLESDPGLFTLLLEDFGVKGVQV 228
LT G L SDPG+ T+LL D V+G+QV
Sbjct: 224 LTLG-LSAHSDPGILTVLLADDHVRGLQV 251
>01_01_0484 - 3558941-3559303,3559439-3559560,3560596-3560743,
3560853-3561491,3562154-3562450,3562553-3563407,
3564363-3564545,3565041-3565118,3565762-3565974,
3566075-3566238,3566357-3566445,3566761-3566891,
3566980-3567148,3567255-3567327,3567525-3567606,
3567677-3567808,3568743-3568818,3568965-3569065,
3569446-3569636,3569738-3569912,3570604-3570854,
3571327-3571603,3572184-3572267,3572496-3573206
Length = 1867
Score = 29.1 bits (62), Expect = 4.6
Identities = 23/74 (31%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Frame = -2
Query: 317 LDLRSSIHLNKKINPYTGLFKGLCRS*ISSTCTPL-TPKSSNSKVKRPGSLSNXSQPSVR 141
LD + S LNK +FK LC+ C P+ TP S G+L P+
Sbjct: 953 LDTKESSKLNKASKAADDIFKILCK------CVPVSTPSVVVSIALAIGALCLVVPPTAH 1006
Query: 140 LFSSTGIFFIQQWL 99
L S+ F+ +WL
Sbjct: 1007 LVISSASDFLLRWL 1020
>04_04_0388 +
24873624-24873806,24873908-24873979,24874088-24874150,
24874413-24874764,24874869-24875060,24875356-24875774
Length = 426
Score = 28.3 bits (60), Expect = 8.1
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Frame = +1
Query: 214 KGVQVEEIYDLHK---PLKSPVYGFIFLFRWIEERRSRRK 324
K + E YDL K P K + I L +W++ER+ +RK
Sbjct: 92 KAIHPELDYDLKKKWLPRKMAPWSGISLKKWVKERKQKRK 131
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,862,664
Number of Sequences: 37544
Number of extensions: 426582
Number of successful extensions: 1105
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1064
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1098
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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