Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_O15
(840 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-9|CAA86665.2| 321|Caenorhabditis elegans Hypothetical pr... 121 7e-28
AC024774-1|AAM43789.1| 227|Caenorhabditis elegans Ubiquitin c-t... 53 3e-07
AF125955-1|AAD14718.1| 216|Caenorhabditis elegans Ubiquitin c-t... 47 1e-05
AC024774-2|AAM43790.1| 249|Caenorhabditis elegans Ubiquitin c-t... 47 2e-05
AF038618-12|AAM98017.2| 397|Caenorhabditis elegans P38 map kina... 32 0.58
U58752-1|AAB00664.1| 377|Caenorhabditis elegans P38 map kinase ... 31 1.0
AF038618-11|AAM98016.1| 419|Caenorhabditis elegans P38 map kina... 31 1.0
Z74030-3|CAA98437.2| 395|Caenorhabditis elegans Hypothetical pr... 30 1.8
Z54306-2|CAA91088.1| 260|Caenorhabditis elegans Hypothetical pr... 30 2.4
Z83218-5|CAB05691.1| 352|Caenorhabditis elegans Hypothetical pr... 29 3.1
AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans nonsense-medi... 29 3.1
AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor wi... 29 3.1
Z99273-3|CAB16478.1| 392|Caenorhabditis elegans Hypothetical pr... 29 4.1
U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1 dual-specif... 29 4.1
U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1 dual-specif... 29 4.1
U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1 dual-specif... 29 4.1
AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like phos... 29 4.1
Z98851-1|CAB11539.2| 327|Caenorhabditis elegans Hypothetical pr... 28 9.5
>Z46676-9|CAA86665.2| 321|Caenorhabditis elegans Hypothetical
protein C08B11.7 protein.
Length = 321
Score = 121 bits (291), Expect = 7e-28
Identities = 69/189 (36%), Positives = 104/189 (55%), Gaps = 4/189 (2%)
Frame = +1
Query: 154 WLXLESDPGLFTLLLEDFGVKGVQVEEIYDL--HKPLKSPVYGFIFLFRWIEERRSRRKF 327
W +ESDPG+FT +L FGV G+QVEE+Y L K + P YG IFLF+W +
Sbjct: 7 WCLIESDPGVFTEMLRGFGVDGLQVEELYSLDDDKAMTRPTYGLIFLFKWRQG------- 59
Query: 328 VEQIESFVRDEETINNIFFAQQMVPNGCATHALLSILLNC--PNLHLGETLSRLKHHTVG 501
++ D++ NIFFA Q + N CAT AL+++L+N ++ LG L++ K +
Sbjct: 60 -DETTGIPSDKQ---NIFFAHQTIQNACATQALINLLMNVEDTDVKLGNILNQYKEFAID 115
Query: 502 MNPENKGWAIGNTPELACAHNSHAIPQARKKTDKNAGVSTGRFTGEXYHFVSLVPINGHL 681
++P +G + N+ E+ HNS + Q + D G S + YHFV+ VPI +
Sbjct: 116 LDPNTRGHCLSNSEEIRTVHNSFS-RQTLFELDIKGGESE-----DNYHFVTYVPIGNKV 169
Query: 682 FELXGLNHI 708
+EL GL +
Sbjct: 170 YELDGLREL 178
>AC024774-1|AAM43789.1| 227|Caenorhabditis elegans Ubiquitin
c-terminal hydrolase(family 1) protein 3 protein.
Length = 227
Score = 52.8 bits (121), Expect = 3e-07
Identities = 48/188 (25%), Positives = 84/188 (44%), Gaps = 8/188 (4%)
Frame = +1
Query: 151 GWLXLESDPGLFTLLLEDFGVKGVQVEEIY----DLHKPLKSPVYGFIFLFRWIEERRSR 318
GW LES+P L+ G+ G++ ++Y ++ + + +P I F E R
Sbjct: 8 GWQALESNPETINPFLKKIGITGLECVDVYSFDDEMLQFVPTPQLALILCFPSAEAREFL 67
Query: 319 RKFVEQIESFVRDEETINNIFFAQQM--VPNGCATHALLSILLNCPN-LHLGE-TLSRLK 486
K E++E ++ E +FF Q + N C T AL L N N ++LG+ ++
Sbjct: 68 SKQYEEVE---KNGEKPEGVFFMNQSEEIGNACGTFALFHSLANLENRVNLGKGKFAKWY 124
Query: 487 HHTVGMNPENKGWAIGNTPELACAHNSHAIPQARKKTDKNAGVSTGRFTGEXYHFVSLVP 666
+N + + + +LA AH A +T+++ V YHF++ V
Sbjct: 125 EKAKLVNEDERSDLLSGDTDLAEAHEETA---EEGETEQSDHVD--------YHFITYVN 173
Query: 667 INGHLFEL 690
NG L+E+
Sbjct: 174 KNGQLYEI 181
>AF125955-1|AAD14718.1| 216|Caenorhabditis elegans Ubiquitin
c-terminal hydrolase(family 1) protein 1 protein.
Length = 216
Score = 47.2 bits (107), Expect = 1e-05
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 3/182 (1%)
Frame = +1
Query: 154 WLXLESDPGLFTLLLEDFGVKGVQ-VEEIYDLHKPLKSPVYGFIFLFRWIEERRSRRKFV 330
W LES+P + ++E GV GV+ V+ ++ + + P + I F E + + +
Sbjct: 5 WTPLESNPSVINPMIEKMGVSGVKTVDVLFFDDESIGKPQHAVILCF---PEYKKVDEIM 61
Query: 331 EQIESFVRDEETINNIFFAQQMVPNGCATHALLSILLNCPN-LHLGE-TLSRLKHHTVGM 504
+ I + + + +++FF +Q + N C T AL L N + ++LG+ + ++ +
Sbjct: 62 KPI--YEQAKAADDSVFFMKQKISNACGTFALFHSLANLEDRINLGDGSFAKWLAEAKKV 119
Query: 505 NPENKGWAIGNTPELACAHNSHAIPQARKKTDKNAGVSTGRFTGEXYHFVSLVPINGHLF 684
E + + N ELA H A TD S +HF+ V NG L+
Sbjct: 120 GIEERSDFLANNAELAGIH-------AAAATDGQTAPS----GDVEHHFICFVGKNGILY 168
Query: 685 EL 690
E+
Sbjct: 169 EI 170
>AC024774-2|AAM43790.1| 249|Caenorhabditis elegans Ubiquitin
c-terminal hydrolase(family 1) protein 2 protein.
Length = 249
Score = 46.8 bits (106), Expect = 2e-05
Identities = 50/191 (26%), Positives = 79/191 (41%), Gaps = 7/191 (3%)
Frame = +1
Query: 139 SLTEGWLXLESDPGLFTLLLEDFGVKGVQVEEIY----DLHKPLKSPVYGFIFLFRWIEE 306
S T GW LES+P L GV GV+ +++ ++ + + +P I F
Sbjct: 3 SATGGWQALESNPETINPFLSKIGVSGVECVDVFSFDDEMLQFIPTPQLALILCFPSSGV 62
Query: 307 RRSRRKFVEQIESFVRDEETINNIFFAQQM--VPNGCATHALLSILLNCPN-LHLGETLS 477
R R K E++E ++ + + IFF Q + + C T +L L N N ++LG
Sbjct: 63 REFRAKQYEEVE---KNGKKPDGIFFMNQKKEIGHACGTFSLFHSLANLENRVNLGNGKF 119
Query: 478 RLKHHTVGMNPENKGWAIGNTPELACAHNSHAIPQARKKTDKNAGVSTGRFTGEXYHFVS 657
+ E G +L A A +A K+T + YHF++
Sbjct: 120 SKWFEKAKLVGE------GERSDLLLADTDLA--EAHKETAEEGETEHPEHVA--YHFIT 169
Query: 658 LVPINGHLFEL 690
V NG LFE+
Sbjct: 170 YVNKNGQLFEI 180
>AF038618-12|AAM98017.2| 397|Caenorhabditis elegans P38 map kinase
family protein 2,isoform b protein.
Length = 397
Score = 31.9 bits (69), Expect = 0.58
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +2
Query: 596 QTKMLEFLLA---DLQVXHTILLAWYQSMDICLNXMVLTISYGSWSVG 730
+ K+L+F LA D ++ + WY++ +I LN M T + WSVG
Sbjct: 188 EVKILDFGLARAQDAEMTGYVATRWYRAPEIMLNWMHYTQTVDVWSVG 235
>U58752-1|AAB00664.1| 377|Caenorhabditis elegans P38 map kinase
family protein 1 protein.
Length = 377
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Frame = +2
Query: 596 QTKMLEFLLA---DLQVXHTILLAWYQSMDICLNXMVLTISYGSWSVG 730
+ K+L+F LA D ++ + WY++ +I LN M T + WSVG
Sbjct: 174 ELKILDFGLARQTDSEMTGYVATRWYRAPEIMLNWMHYTQTVDVWSVG 221
>AF038618-11|AAM98016.1| 419|Caenorhabditis elegans P38 map kinase
family protein 2,isoform a protein.
Length = 419
Score = 31.1 bits (67), Expect = 1.0
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +2
Query: 602 KMLEFLLA---DLQVXHTILLAWYQSMDICLNXMVLTISYGSWSVG 730
K+L+F LA D ++ + WY++ +I LN M T + WSVG
Sbjct: 207 KILDFGLARAQDAEMTGYVATRWYRAPEIMLNWMHYTQTVDVWSVG 252
>Z74030-3|CAA98437.2| 395|Caenorhabditis elegans Hypothetical
protein D1054.5 protein.
Length = 395
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/64 (26%), Positives = 35/64 (54%)
Frame = +1
Query: 187 TLLLEDFGVKGVQVEEIYDLHKPLKSPVYGFIFLFRWIEERRSRRKFVEQIESFVRDEET 366
T+ +ED +K + +EE+ + ++S + + +W +++ K++EQI V ET
Sbjct: 265 TVSVEDPDLKDMSLEEMRRHAEDIESYIQDQVKQ-QWSQQKNETEKWIEQIAGKVAKTET 323
Query: 367 INNI 378
+N I
Sbjct: 324 MNTI 327
>Z54306-2|CAA91088.1| 260|Caenorhabditis elegans Hypothetical
protein B0457.4 protein.
Length = 260
Score = 29.9 bits (64), Expect = 2.4
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 4/96 (4%)
Frame = +1
Query: 79 TAINVNNNHC*MKNMPVELNSLTEGWLXLE-SDPGLFTLLLEDFGVKGVQVEEIYDLHKP 255
T N N +H + VE++ W + PG +L + GVQVE+I P
Sbjct: 77 TCRNCNKSHKRSRIEHVEVSQCRFSWFKVSMKQPGHAKKMLSETSKLGVQVEDILHALLP 136
Query: 256 LKSP---VYGFIFLFRWIEERRSRRKFVEQIESFVR 354
+P ++ + F + IE+ + VE +FVR
Sbjct: 137 SSNPNCWLHFYTFKAKSIEDEEKLKTAVE--TNFVR 170
>Z83218-5|CAB05691.1| 352|Caenorhabditis elegans Hypothetical
protein C31A11.9 protein.
Length = 352
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/45 (35%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Frame = -3
Query: 589 CVLVVWHVSCGHKPTQV----YFLLPILCFQDSYPLYDVLTYLMF 467
C+L+ ++ H P ++ Y +L I CF+ +Y L DVL MF
Sbjct: 24 CILI--NIITKHSPKEIGDYKYLMLFISCFEITYSLLDVLVQPMF 66
>AF074017-1|AAC26789.1| 1069|Caenorhabditis elegans
nonsense-mediated mRNA decay trans-acting factor
protein.
Length = 1069
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 502 MNPENKGWAIGNTPELACAHNSHAIP-QARKKTDKNAGVSTGRFTGEXYHFV 654
++PE+ G +IGNT + A+ ++P Q+ + TD G + G +H V
Sbjct: 19 VDPEDDGVSIGNTQDSQFAYEQFSVPTQSSQATDLLPGGTDGTTNDLPFHDV 70
>AC025721-8|AAK29903.2| 1069|Caenorhabditis elegans Suppressor with
morphological effecton genitalia protein 2 protein.
Length = 1069
Score = 29.5 bits (63), Expect = 3.1
Identities = 16/52 (30%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Frame = +1
Query: 502 MNPENKGWAIGNTPELACAHNSHAIP-QARKKTDKNAGVSTGRFTGEXYHFV 654
++PE+ G +IGNT + A+ ++P Q+ + TD G + G +H V
Sbjct: 19 VDPEDDGVSIGNTQDSQFAYEQFSVPTQSSQATDLLPGGTDGTTNDLPFHDV 70
>Z99273-3|CAB16478.1| 392|Caenorhabditis elegans Hypothetical
protein Y45F10C.3 protein.
Length = 392
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 140 VLPKAGXNWKVILVFLLYY*KISVLKVC 223
VLP +G W +LV + Y K VLK+C
Sbjct: 263 VLPGSGGPWTNVLVEMEQYKKAKVLKIC 290
>U23178-5|AAN63417.1| 439|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform c
protein.
Length = 439
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 233 SSTCTPLTPKSSNSKVKRPGSLSNXSQPS 147
S C P PKS++S PGS + S PS
Sbjct: 185 SDLCPPKVPKSASSNCVFPGSTHDESSPS 213
>U23178-4|AAK68300.1| 606|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform b
protein.
Length = 606
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 233 SSTCTPLTPKSSNSKVKRPGSLSNXSQPS 147
S C P PKS++S PGS + S PS
Sbjct: 289 SDLCPPKVPKSASSNCVFPGSTHDESSPS 317
>U23178-3|AAK68299.1| 657|Caenorhabditis elegans Vh1
dual-specificity phosphatasefamily protein 1, isoform a
protein.
Length = 657
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 233 SSTCTPLTPKSSNSKVKRPGSLSNXSQPS 147
S C P PKS++S PGS + S PS
Sbjct: 340 SDLCPPKVPKSASSNCVFPGSTHDESSPS 368
>AY585194-1|AAS91377.1| 657|Caenorhabditis elegans VH1-like
phosphatase 1 protein.
Length = 657
Score = 29.1 bits (62), Expect = 4.1
Identities = 13/29 (44%), Positives = 16/29 (55%)
Frame = -2
Query: 233 SSTCTPLTPKSSNSKVKRPGSLSNXSQPS 147
S C P PKS++S PGS + S PS
Sbjct: 340 SDLCPPKVPKSASSNCVFPGSTHDESSPS 368
>Z98851-1|CAB11539.2| 327|Caenorhabditis elegans Hypothetical
protein H12I19.1 protein.
Length = 327
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/42 (30%), Positives = 24/42 (57%)
Frame = -3
Query: 616 KLQHFCLSFCVLVVWHVSCGHKPTQVYFLLPILCFQDSYPLY 491
K F + F +++V + C H TQ+++LL I+ + + LY
Sbjct: 95 KKSFFVVPFLIVMVIIIFCLHVITQIFYLLIIVLAFERFLLY 136
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,460,419
Number of Sequences: 27780
Number of extensions: 402675
Number of successful extensions: 1065
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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