Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_O15
         (840 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier...    23   3.5  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          23   4.6  
AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.    23   4.6  

>AY736135-1|AAU84701.1|  253|Apis mellifera take-out-like carrier
           protein JHBP-1 protein.
          Length = 253

 Score = 23.0 bits (47), Expect = 3.5
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = +1

Query: 463 GETLSRLKHHTVGMNP 510
           GET  R+K H V  NP
Sbjct: 170 GETYLRIKKHAVKFNP 185


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +1

Query: 28  QRFGNNKTIKLNKTKDSTAINVNNNH 105
           QR  NN TI       + + N NNN+
Sbjct: 220 QRNSNNSTITAGNANTNASNNNNNNN 245


>AF023619-1|AAC39040.1|  355|Apis mellifera arginine kinase protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 4.6
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = -2

Query: 383 KKILLMVSSSRTKLSICSTNFRLDLRSSIHL 291
           K++L   +     L+ C TN    +R+S+H+
Sbjct: 254 KRLLFSHNDRLGFLTFCPTNLGTTVRASVHI 284


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 221,100
Number of Sequences: 438
Number of extensions: 4802
Number of successful extensions: 6
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 26945694
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)