Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_O12
(833 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 215 4e-56
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 215 4e-56
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 215 4e-56
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 213 2e-55
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 195 3e-50
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 192 2e-49
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 192 2e-49
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 192 3e-49
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 191 5e-49
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 191 5e-49
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 188 4e-48
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 188 4e-48
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 178 3e-45
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 177 1e-44
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 155 5e-38
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 134 6e-32
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 103 2e-22
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 103 2e-22
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 103 2e-22
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 102 4e-22
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 101 5e-22
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 97 1e-20
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 91 9e-19
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 91 9e-19
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 59 3e-09
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 59 3e-09
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.58
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 4.1
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 4.1
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 4.1
U00050-9|AAA50695.2| 1154|Caenorhabditis elegans Hypothetical pr... 29 5.4
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 7.2
Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical p... 28 9.5
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 215 bits (524), Expect = 4e-56
Identities = 92/106 (86%), Positives = 102/106 (96%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARG
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Score = 79.4 bits (187), Expect = 3e-15
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYTIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGG
Sbjct: 106 GHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGG 143
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 215 bits (524), Expect = 4e-56
Identities = 92/106 (86%), Positives = 102/106 (96%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARG
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Score = 79.4 bits (187), Expect = 3e-15
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYTIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGG
Sbjct: 106 GHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGG 143
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 215 bits (524), Expect = 4e-56
Identities = 92/106 (86%), Positives = 102/106 (96%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARG
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 106
Score = 79.4 bits (187), Expect = 3e-15
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYTIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGG
Sbjct: 106 GHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGG 143
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 213 bits (519), Expect = 2e-55
Identities = 91/105 (86%), Positives = 101/105 (96%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 288
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 289 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARG
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARG 105
Score = 79.4 bits (187), Expect = 3e-15
Identities = 33/38 (86%), Positives = 36/38 (94%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYTIGKEI+DL LDRIR+LAD CTGLQGFL+FHSFGG
Sbjct: 105 GHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGG 142
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 195 bits (476), Expect = 3e-50
Identities = 85/106 (80%), Positives = 95/106 (89%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARG
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARG 106
Score = 70.5 bits (165), Expect = 1e-12
Identities = 27/38 (71%), Positives = 35/38 (92%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYTIGKE++D+V+DR+R+L ++C LQGFLIFHSFGG
Sbjct: 106 GHYTIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGG 143
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 192 bits (469), Expect = 2e-49
Identities = 85/106 (80%), Positives = 97/106 (91%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Score = 74.5 bits (175), Expect = 8e-14
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYT+GKE++D VLDRIR+LAD C+GLQGF +FHSFGG
Sbjct: 104 GHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGG 141
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 192 bits (469), Expect = 2e-49
Identities = 85/106 (80%), Positives = 97/106 (91%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Score = 74.5 bits (175), Expect = 8e-14
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYT+GKE++D VLDRIR+LAD C+GLQGF +FHSFGG
Sbjct: 104 GHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGG 141
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 192 bits (467), Expect = 3e-49
Identities = 83/107 (77%), Positives = 95/107 (88%)
Frame = +1
Query: 103 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAG 282
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 283 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARG
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARG 111
Score = 72.9 bits (171), Expect = 3e-13
Identities = 28/38 (73%), Positives = 35/38 (92%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYTIGKEI+D+V+DR+R+L + C GLQGFL+FHSFGG
Sbjct: 111 GHYTIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGG 148
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 191 bits (466), Expect = 5e-49
Identities = 84/106 (79%), Positives = 97/106 (91%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Score = 74.5 bits (175), Expect = 8e-14
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYT+GKE++D VLDRIR+LAD C+GLQGF +FHSFGG
Sbjct: 104 GHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGG 141
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 191 bits (466), Expect = 5e-49
Identities = 84/106 (79%), Positives = 97/106 (91%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARG
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARG 104
Score = 74.5 bits (175), Expect = 8e-14
Identities = 29/38 (76%), Positives = 35/38 (92%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYT+GKE++D VLDRIR+LAD C+GLQGF +FHSFGG
Sbjct: 104 GHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGG 141
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 188 bits (458), Expect = 4e-48
Identities = 83/106 (78%), Positives = 96/106 (90%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARG
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARG 104
Score = 72.9 bits (171), Expect = 3e-13
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYT+GKE++D LDRIR+LAD C+GLQGF +FHSFGG
Sbjct: 104 GHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGG 141
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 188 bits (458), Expect = 4e-48
Identities = 83/106 (78%), Positives = 96/106 (90%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARG
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARG 104
Score = 72.9 bits (171), Expect = 3e-13
Identities = 28/38 (73%), Positives = 34/38 (89%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYT+GKE++D LDRIR+LAD C+GLQGF +FHSFGG
Sbjct: 104 GHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGG 141
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 178 bits (434), Expect = 3e-45
Identities = 80/105 (76%), Positives = 88/105 (83%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 288
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 289 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARG 112
Score = 67.3 bits (157), Expect = 1e-11
Identities = 25/38 (65%), Positives = 35/38 (92%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
G YTIG+E++D+V+DR+++LA+ C GLQGF+IFHSFGG
Sbjct: 112 GRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGG 149
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 177 bits (430), Expect = 1e-44
Identities = 79/106 (74%), Positives = 89/106 (83%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARG
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARG 103
Score = 70.9 bits (166), Expect = 1e-12
Identities = 28/38 (73%), Positives = 33/38 (86%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYT+GKEI+D LDRIR+LA+ C GLQGF +FHSFGG
Sbjct: 103 GHYTVGKEIIDTTLDRIRRLANNCEGLQGFFVFHSFGG 140
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 155 bits (375), Expect = 5e-38
Identities = 66/105 (62%), Positives = 81/105 (77%)
Frame = +1
Query: 109 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKH 288
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 289 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARG
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARG 109
Score = 72.1 bits (169), Expect = 4e-13
Identities = 29/38 (76%), Positives = 34/38 (89%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYTIGKE++D+VLDRIRK + C GLQGFL+FHSFGG
Sbjct: 109 GHYTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGG 146
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 134 bits (325), Expect = 6e-32
Identities = 60/84 (71%), Positives = 68/84 (80%)
Frame = +1
Query: 172 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 351
++CLEHGIQPDG D T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 352 YRQLFHPEQLITGKEDAANNYARG 423
YR LFHPEQL++GKEDAAN YARG
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARG 84
Score = 67.3 bits (157), Expect = 1e-11
Identities = 25/38 (65%), Positives = 35/38 (92%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
G YTIG+E++D+V+DR+++LA+ C GLQGF+IFHSFGG
Sbjct: 84 GRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGG 121
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 103 bits (247), Expect = 2e-22
Identities = 50/113 (44%), Positives = 69/113 (61%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE + V GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 444
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG--HYTEG 109
Score = 50.4 bits (115), Expect = 2e-06
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYT G E+VD VLD +RK A+ C LQGF + HS GG
Sbjct: 104 GHYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSLGG 141
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 103 bits (247), Expect = 2e-22
Identities = 49/113 (43%), Positives = 70/113 (61%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 444
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKG--HYTEG 109
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYT G E+VD VLD +RK A+ LQGF + HS GG
Sbjct: 104 GHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGG 141
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 103 bits (247), Expect = 2e-22
Identities = 49/113 (43%), Positives = 70/113 (61%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQL--ERINVYYNEAGSNK 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 444
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKG--HYTEG 109
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/38 (57%), Positives = 26/38 (68%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYT G E+VD VLD +RK A+ LQGF + HS GG
Sbjct: 104 GHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSLGG 141
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 102 bits (244), Expect = 4e-22
Identities = 49/113 (43%), Positives = 70/113 (61%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 444
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG--HYTEG 109
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYT G E+VD VLD IRK A+ C LQGF + HS GG
Sbjct: 104 GHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGG 141
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 101 bits (243), Expect = 5e-22
Identities = 49/113 (43%), Positives = 70/113 (61%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 444
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKG--HYTEG 109
Score = 50.8 bits (116), Expect = 1e-06
Identities = 24/38 (63%), Positives = 27/38 (71%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYT G E+VD VLD IRK A+ C LQGF + HS GG
Sbjct: 104 GHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSLGG 141
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 97.1 bits (231), Expect = 1e-20
Identities = 47/113 (41%), Positives = 65/113 (57%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
MRE + + GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKG 444
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+G H+ +G
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKG--HYTEG 109
Score = 50.8 bits (116), Expect = 1e-06
Identities = 23/38 (60%), Positives = 27/38 (71%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
GHYT G E+VD VLD +RK A+ C LQGF + HS GG
Sbjct: 104 GHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSLGG 141
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 91.1 bits (216), Expect = 9e-19
Identities = 44/106 (41%), Positives = 63/106 (59%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRG 104
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
G+Y G EIVD VL IR+ A+ L+GF + HS GG
Sbjct: 104 GYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGG 141
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 91.1 bits (216), Expect = 9e-19
Identities = 44/106 (41%), Positives = 63/106 (59%)
Frame = +1
Query: 106 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 285
M+E I+V VGQ G QIG WE EHG+Q DG D G + +++ E K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 286 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARG 423
+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRG 104
Score = 41.1 bits (92), Expect = 0.001
Identities = 19/38 (50%), Positives = 24/38 (63%)
Frame = +2
Query: 422 GHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHSFGG 535
G+Y G EIVD VL IR+ A+ L+GF + HS GG
Sbjct: 104 GYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSLGG 141
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 59.3 bits (137), Expect = 3e-09
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Frame = +1
Query: 118 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 297
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 298 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARG 423
AV VDLEP V++ +++ + LF+ + + A NN+A G
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG 109
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 59.3 bits (137), Expect = 3e-09
Identities = 35/105 (33%), Positives = 55/105 (52%), Gaps = 3/105 (2%)
Frame = +1
Query: 118 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPR 297
++VHVGQ G Q+ A W+ EHGI GQ + + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 298 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARG 423
AV VDLEP V++ +++ + LF+ + + A NN+A G
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG 109
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.58
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +2
Query: 134 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELAST 289
A P MP+ S + S++SS M + P+ PS ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 148 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 327
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 328 VDE 336
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 148 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 327
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 328 VDE 336
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +1
Query: 148 QIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 327
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 328 VDE 336
DE
Sbjct: 116 ADE 118
>U00050-9|AAA50695.2| 1154|Caenorhabditis elegans Hypothetical
protein F09F7.3 protein.
Length = 1154
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = -2
Query: 496 GTLVSELADSVQNQIYDFLSNGVVTH 419
GT VS L +++ DFLSN ++TH
Sbjct: 307 GTSVSVLTPPKEHEAVDFLSNSMITH 332
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 7.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 396 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 301
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>Z98877-14|CAD56615.1| 338|Caenorhabditis elegans Hypothetical
protein Y69H2.14 protein.
Length = 338
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Frame = +1
Query: 334 EVRTGTYRQLFHPEQLITGKEDAANNYARGSLHHWKGNRRFG---FGQNPQAR*PVYR 498
+V T +Q Q +TG Y G H + + +G + Q PQ PVYR
Sbjct: 73 KVEAVTGQQSRIKRQYVTGPMGGGGGYGGGGYGHQQQQQNYGHQGYAQRPQQPQPVYR 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,721,996
Number of Sequences: 27780
Number of extensions: 327843
Number of successful extensions: 845
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 782
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 825
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2072006206
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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