Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_O10
         (826 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein...    31   0.26 
SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces pombe...    29   0.61 
SPAC15E1.05c |||ethanolamine-phosphate cytidylyltransferase |Sch...    27   4.3  
SPBC409.18 |||phosphatidic acid phosphatase |Schizosaccharomyces...    27   4.3  
SPAC15A10.13 |ppk3||serine/threonine protein kinase Ppk3|Schizos...    26   5.6  
SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein homolog|Schizosacch...    26   5.6  
SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|ch...    26   7.5  
SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyc...    26   7.5  
SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces pomb...    25   9.9  
SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces pombe...    25   9.9  
SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|...    25   9.9  
SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||M...    25   9.9  

>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
           protein|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 670

 Score = 30.7 bits (66), Expect = 0.26
 Identities = 28/89 (31%), Positives = 37/89 (41%)
 Frame = -3

Query: 488 PTRGPSSYHVLGSGGPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSS 309
           PT  PSS     S        T+TA       S  T   T +     T   SS Y+S SS
Sbjct: 464 PTSAPSSVSSFTSSNSSY-TTTLTA-------SNTTVTFTGTGTGSATATSSSPYYSNSS 515

Query: 308 LVIPVKCRLLASSSIFASPFLWSPTTYFA 222
           +++P       S S F+S    SPT+ F+
Sbjct: 516 IIVPTTVSTSGSVSSFSSS--PSPTSSFS 542


>SPBC1E8.05 |||conserved fungal protein|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 317

 Score = 29.5 bits (63), Expect = 0.61
 Identities = 15/58 (25%), Positives = 31/58 (53%)
 Frame = -3

Query: 485 TRGPSSYHVLGSGGPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTS 312
           TR  SSY +  S      + + ++ +P+S  S+++ ++ +S     + K SS+  S+S
Sbjct: 139 TRTSSSYFITSSSSTPSSSSSSSSSSPSSSSSKSSSSSKSSSSSSSSSKSSSSSSSSS 196


>SPAC15E1.05c |||ethanolamine-phosphate cytidylyltransferase
           |Schizosaccharomyces pombe|chr 1|||Manual
          Length = 365

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 11/34 (32%), Positives = 16/34 (47%)
 Frame = +3

Query: 714 FVQSENSTEPYTDYFIWTKEXPAXXVQKSTCQRL 815
           F    +   P+TD FI+  E P   +  +T  RL
Sbjct: 165 FATDSDGLTPFTDVFIYNTEKPETLISGTTLLRL 198


>SPBC409.18 |||phosphatidic acid phosphatase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 279

 Score = 26.6 bits (56), Expect = 4.3
 Identities = 10/19 (52%), Positives = 15/19 (78%)
 Frame = -1

Query: 616 VCHVCRALRKSALGRTRPE 560
           VC +C +L K+A+GR RP+
Sbjct: 102 VCGLCVSLLKNAVGRPRPD 120


>SPAC15A10.13 |ppk3||serine/threonine protein kinase
           Ppk3|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 637

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 19/66 (28%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = -1

Query: 196 FLPRLPSSIVSLRRRRQISSPSICRGSFWTTGIQKST-SKRLIILNEIHAMLFSAESKET 20
           FL R+ +   +L  +  +S+P+   GSFW+  I  S+ S    I  +  ++    ++ E 
Sbjct: 524 FLSRIKN--FNLGEKENVSAPAKFNGSFWSKFIHSSSASPSPSIDMKKESLELKNDTTEI 581

Query: 19  TEKKTS 2
            EKK S
Sbjct: 582 KEKKNS 587


>SPBC28E12.06c |lvs1|SPBC3H7.16|beige protein
           homolog|Schizosaccharomyces pombe|chr 2|||Manual
          Length = 2609

 Score = 26.2 bits (55), Expect = 5.6
 Identities = 15/62 (24%), Positives = 29/62 (46%)
 Frame = -3

Query: 446 GPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVIPVKCRLLASSS 267
           GP +G+R  +  +  + +   T    + +    +QK S +Y +  SL +P    LL  ++
Sbjct: 523 GPSIGSRNQSTPSTLAPNVAETDALVSENTGAASQKTSKSYKTNDSLKVPPLVPLLIGTT 582

Query: 266 IF 261
            F
Sbjct: 583 RF 584


>SPAC27D7.11c |||But2 family protein|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 463

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 13/53 (24%), Positives = 22/53 (41%)
 Frame = -3

Query: 458 LGSGGPHLGARTMTAIAPASMHSQATQNNTNSDQRKFTQKGSSAYFSTSSLVI 300
           +G+G P      + A+ P  + S +T N+T S     T        ST +  +
Sbjct: 150 VGNGNPSCVGIAVLAVLPQPISSSSTYNSTTSSYHNSTSTPPPTITSTKASTV 202


>SPAC2E1P3.02c |amt3||ammonium transporter Amt3|Schizosaccharomyces
           pombe|chr 1|||Manual
          Length = 517

 Score = 25.8 bits (54), Expect = 7.5
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 370 VLFWVAWLCMLAGAIAVI 423
           VL W AWLC  +G +  +
Sbjct: 278 VLIWFAWLCFNSGTLLTV 295


>SPBC1347.12 |||actin-like protein Arp1 |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 379

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 11/29 (37%), Positives = 18/29 (62%)
 Frame = -1

Query: 742 GSVLFSLCTNQVWLVNTSSVSNQQSLLFR 656
           GS+L SL T +  L+ +    N Q+++FR
Sbjct: 348 GSILASLSTFRRLLITSEEYKNDQNVIFR 376


>SPBC26H8.12 |||cytochrome c heme lyase|Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 377

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
 Frame = +2

Query: 467 TNSVPWSDW-TWSMPSNHKIYNRIW 538
           T+S+P  D   W  PS  ++YN +W
Sbjct: 210 TSSIPKVDGKNWEYPSPQQMYNAMW 234


>SPAC6F6.02c |pof5||F-box protein Pof5|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 348

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 11/35 (31%), Positives = 19/35 (54%)
 Frame = +1

Query: 643 KIKKIGIRVIVDLIPNSCSPTIPGSYRVRTALSPI 747
           ++ + G+  I  L PN+ + +IP +Y   TA   I
Sbjct: 235 ELSRSGLDCIFQLCPNATTISIPANYITSTAFESI 269


>SPBC36.11 |||sequence orphan|Schizosaccharomyces pombe|chr
           2|||Manual
          Length = 343

 Score = 25.4 bits (53), Expect = 9.9
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
 Frame = -2

Query: 495 VQSDQGTEFVPCPGFGRAALGC-AYNDCNSPGEHAQPGHPE 376
           VQS QG    P PG    ++    YND NS G H+     E
Sbjct: 247 VQSVQGRPLAPIPGRRPLSISSDLYNDSNS-GSHSNDDSDE 286


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,087,845
Number of Sequences: 5004
Number of extensions: 63062
Number of successful extensions: 195
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 185
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 193
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 404442380
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)