Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_O09
(858 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 344 4e-95
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 344 4e-95
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 344 4e-95
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 342 2e-94
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 322 1e-88
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 322 1e-88
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 318 2e-87
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 318 4e-87
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 316 2e-86
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 316 2e-86
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 315 2e-86
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 309 1e-84
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 297 6e-81
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 290 7e-79
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 275 2e-74
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 246 1e-65
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 163 1e-40
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 162 3e-40
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 161 6e-40
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 159 2e-39
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 159 2e-39
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 157 1e-38
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 140 9e-34
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 140 9e-34
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 88 7e-18
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 88 7e-18
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.60
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 29 4.2
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 29 4.2
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 29 4.2
AL110485-19|CAB60367.2| 529|Caenorhabditis elegans Hypothetical... 28 7.4
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 28 7.4
AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosenso... 28 9.8
AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosenso... 28 9.8
AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensor... 28 9.8
AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensor... 28 9.8
AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensor... 28 9.8
AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensor... 28 9.8
AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensor... 28 9.8
AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensor... 28 9.8
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 344 bits (846), Expect = 4e-95
Identities = 156/203 (76%), Positives = 172/203 (84%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGK 283
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+ K++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTA 643
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQV TA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 644 VVEPYNSIXXXXXXXXXXXCAFM 712
VVEPYNSI C+FM
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFM 203
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 344 bits (846), Expect = 4e-95
Identities = 156/203 (76%), Positives = 172/203 (84%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGK 283
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+ K++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTA 643
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQV TA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 644 VVEPYNSIXXXXXXXXXXXCAFM 712
VVEPYNSI C+FM
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFM 203
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 344 bits (846), Expect = 4e-95
Identities = 156/203 (76%), Positives = 172/203 (84%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGK 283
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+ K++GG DDSF+TFFSETG+G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
HVPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LD
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLD 120
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTA 643
RIR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQV TA
Sbjct: 121 RIRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Query: 644 VVEPYNSIXXXXXXXXXXXCAFM 712
VVEPYNSI C+FM
Sbjct: 181 VVEPYNSILTTHTTLEHSDCSFM 203
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 342 bits (841), Expect = 2e-94
Identities = 155/202 (76%), Positives = 171/202 (84%)
Frame = +2
Query: 107 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGKH 286
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+ K++GG DDSF+TFFSETG+G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 287 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VPRAV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL LDR
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDR 120
Query: 467 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTAV 646
IR+LAD CTGLQGFL+FH LLMERLSVDYGKK+KLEF+IYPAPQV TAV
Sbjct: 121 IRRLADNCTGLQGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTAV 180
Query: 647 VEPYNSIXXXXXXXXXXXCAFM 712
VEPYNSI C+FM
Sbjct: 181 VEPYNSILTTHTTLEHSDCSFM 202
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 322 bits (792), Expect = 1e-88
Identities = 148/203 (72%), Positives = 167/203 (82%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGK 283
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTA 643
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQV TA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 644 VVEPYNSIXXXXXXXXXXXCAFM 712
VVEPYNSI CAFM
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFM 201
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 322 bits (792), Expect = 1e-88
Identities = 148/203 (72%), Positives = 167/203 (82%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGK 283
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGR 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTA 643
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQV TA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 644 VVEPYNSIXXXXXXXXXXXCAFM 712
VVEPYNSI CAFM
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFM 201
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 318 bits (782), Expect = 2e-87
Identities = 146/203 (71%), Positives = 166/203 (81%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGK 283
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+ + G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTA 643
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQV TA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 644 VVEPYNSIXXXXXXXXXXXCAFM 712
VVEPYNSI CAFM
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFM 201
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 318 bits (780), Expect = 4e-87
Identities = 146/203 (71%), Positives = 166/203 (81%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGK 283
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+ + G +SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGR 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPR++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D VLD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTA 643
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQV TA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTA 178
Query: 644 VVEPYNSIXXXXXXXXXXXCAFM 712
VVEPYNSI CAFM
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFM 201
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 316 bits (775), Expect = 2e-86
Identities = 145/203 (71%), Positives = 164/203 (80%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGK 283
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+ + GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTA 643
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQV TA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 644 VVEPYNSIXXXXXXXXXXXCAFM 712
VVEPYNSI CAFM
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFM 201
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 316 bits (775), Expect = 2e-86
Identities = 145/203 (71%), Positives = 164/203 (80%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGK 283
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+ + GG SF TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGR 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPR++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D LD
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTA 643
RIR+LAD C+GLQGF +FH LLMERLSVDYGKKSKLEF+IYPAPQV TA
Sbjct: 119 RIRRLADNCSGLQGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Query: 644 VVEPYNSIXXXXXXXXXXXCAFM 712
VVEPYNSI CAFM
Sbjct: 179 VVEPYNSILTTHTTLEHSDCAFM 201
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 315 bits (774), Expect = 2e-86
Identities = 142/204 (69%), Positives = 163/204 (79%)
Frame = +2
Query: 101 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAG 280
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + ++G DDSFNTFFSET AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 281 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 460
KHVPRA+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V+
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM 124
Query: 461 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPT 640
DR+R+L + C GLQGFL+FH LLMERLSVDYGKKSKLEF IYPAPQV T
Sbjct: 125 DRVRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVST 184
Query: 641 AVVEPYNSIXXXXXXXXXXXCAFM 712
++VEPYNSI C+FM
Sbjct: 185 SMVEPYNSILTTHTTLEHSDCSFM 208
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 309 bits (759), Expect = 1e-84
Identities = 136/203 (66%), Positives = 164/203 (80%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGK 283
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP + G D S+NTFFSET +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
HVPRA+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V+D
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMD 120
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTA 643
R+R+L ++C LQGFLIFH L+MERLS+DYGKK+KLEF+IYPAPQ+ T+
Sbjct: 121 RVRRLTERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Query: 644 VVEPYNSIXXXXXXXXXXXCAFM 712
+VEPYNS+ C+F+
Sbjct: 181 MVEPYNSLLTTHTTLEHSDCSFI 203
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 297 bits (729), Expect = 6e-81
Identities = 135/203 (66%), Positives = 157/203 (77%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGK 283
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T+ G S TFFS+TG G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
HVPR++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI+D LD
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLD 117
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTA 643
RIR+LA+ C GLQGF +FH +LMERLS +YGKKSKLEF+IYPAPQ+ T+
Sbjct: 118 RIRRLANNCEGLQGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYPAPQISTS 177
Query: 644 VVEPYNSIXXXXXXXXXXXCAFM 712
VVEPYNSI C+FM
Sbjct: 178 VVEPYNSILTTHTTLEHSDCSFM 200
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 290 bits (712), Expect = 7e-79
Identities = 133/202 (65%), Positives = 154/202 (76%)
Frame = +2
Query: 107 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGKH 286
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG T ++ NTFF+ET GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 287 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VPR +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDR 127
Query: 467 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTAV 646
+++LA+ C GLQGF+IFH LLMERLS +YGKK KLEFAIYPAPQV T++
Sbjct: 128 VKRLAENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSM 187
Query: 647 VEPYNSIXXXXXXXXXXXCAFM 712
VEPYNSI C FM
Sbjct: 188 VEPYNSILMTHTTLEHSDCTFM 209
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 275 bits (675), Expect = 2e-74
Identities = 124/202 (61%), Positives = 149/202 (73%)
Frame = +2
Query: 107 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGKH 286
REC+S+H+GQAG QIGNACWELYC+EHG+ G + + S FFSE+ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 287 VPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VPRA++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+VLDR
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVLDR 124
Query: 467 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTAV 646
IRK + C GLQGFL+FH LLMERLSV++GKKSKLEF++YPAPQV T+V
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTSV 184
Query: 647 VEPYNSIXXXXXXXXXXXCAFM 712
VEPYNSI C+FM
Sbjct: 185 VEPYNSILTTHTTLELSDCSFM 206
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 246 bits (603), Expect = 1e-65
Identities = 113/181 (62%), Positives = 134/181 (74%)
Frame = +2
Query: 170 LYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVDEVRTGT 349
++CLEHGIQPDG T ++ NTFF+ET GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 350 YRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGFLIFHXXX 529
YR LFHPEQL++GKEDAAN YARG YTIG+E++D+V+DR+++LA+ C GLQGF+IFH
Sbjct: 61 YRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFG 120
Query: 530 XXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTAVVEPYNSIXXXXXXXXXXXCAF 709
LLMERLS +YGKK KLEFAIYPAPQV T++VEPYNSI C F
Sbjct: 121 GGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTSMVEPYNSILMTHTTLEHSDCTF 180
Query: 710 M 712
M
Sbjct: 181 M 181
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 163 bits (397), Expect = 1e-40
Identities = 80/187 (42%), Positives = 110/187 (58%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGK 283
MRE + V GQ G QIG WE+ EHGIQPDG + + N +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQL--ERINVYYNEANGGK 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTA 643
+RK A+ C LQGF + H LL+ ++ +Y + F++ P+P+V
Sbjct: 119 VVRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 644 VVEPYNS 664
VVEPYN+
Sbjct: 179 VVEPYNA 185
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 162 bits (394), Expect = 3e-40
Identities = 80/187 (42%), Positives = 111/187 (59%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGK 283
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQL--ERIDVYYNEANNGK 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTA 643
IRK A+ C LQGF + H LL+ ++ +Y + F++ P+P+V
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMSSFSVVPSPKVSDT 178
Query: 644 VVEPYNS 664
VVEPYN+
Sbjct: 179 VVEPYNA 185
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 161 bits (391), Expect = 6e-40
Identities = 79/187 (42%), Positives = 111/187 (59%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGK 283
MRE + V GQ G QIG+ WE+ EHGIQPDG + + + +++E GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQL--ERIDVYYNEANNGK 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTA 643
IRK A+ C LQGF + H LL+ ++ ++ + F++ P+P+V
Sbjct: 119 VIRKEAEGCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEFPDRIMSSFSVVPSPKVSDT 178
Query: 644 VVEPYNS 664
VVEPYN+
Sbjct: 179 VVEPYNA 185
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 159 bits (386), Expect = 2e-39
Identities = 79/190 (41%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGD---DSFNTFFSETG 274
MRE + + GQ G QIG+ WE+ EHGI P GQ +G D + N +++E G
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQY-----VGDSDLQLERINVYYNEAG 55
Query: 275 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 454
+ K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 56 SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDN 115
Query: 455 VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 634
VLD +RK A+ LQGF + H LL+ ++ +Y + F++ P+P+V
Sbjct: 116 VLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKV 175
Query: 635 PTAVVEPYNS 664
VVEPYN+
Sbjct: 176 SDTVVEPYNA 185
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 159 bits (386), Expect = 2e-39
Identities = 79/190 (41%), Positives = 112/190 (58%), Gaps = 3/190 (1%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGD---DSFNTFFSETG 274
MRE + + GQ G QIG+ WE+ EHGI P GQ +G D + N +++E G
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQY-----VGDSDLQLERINVYYNEAG 55
Query: 275 AGKHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDL 454
+ K+VPRAV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD
Sbjct: 56 SNKYVPRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDN 115
Query: 455 VLDRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQV 634
VLD +RK A+ LQGF + H LL+ ++ +Y + F++ P+P+V
Sbjct: 116 VLDVVRKEAESTDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKV 175
Query: 635 PTAVVEPYNS 664
VVEPYN+
Sbjct: 176 SDTVVEPYNA 185
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 157 bits (380), Expect = 1e-38
Identities = 76/187 (40%), Positives = 107/187 (57%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGK 283
MRE + + GQ G QIG WE+ EHGI P G + + N +++E GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQL--ERINVYYNEASGGK 58
Query: 284 HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD 463
+VPRA VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD VLD
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLD 118
Query: 464 RIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPTA 643
+RK A+ C LQGF + H LL+ ++ +Y + + F++ P+P+V
Sbjct: 119 VVRKEAESCDCLQGFQMTHSLGGGTGSGMGTLLISKIREEYPDRIMMTFSVVPSPKVSDT 178
Query: 644 VVEPYNS 664
VVEPYN+
Sbjct: 179 VVEPYNA 185
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 140 bits (340), Expect = 9e-34
Identities = 75/189 (39%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGD-DSFNTFFSETGAG 280
M+E I+V VGQ G QIG WE EHG+Q DG T K G + +++ E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDG---TYKGDNGSQLERITSYYKEMEGR 57
Query: 281 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 460
K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVL 117
Query: 461 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPT 640
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+ +V
Sbjct: 118 SVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSD 177
Query: 641 AVVEPYNSI 667
VVEPYN+I
Sbjct: 178 TVVEPYNAI 186
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 140 bits (340), Expect = 9e-34
Identities = 75/189 (39%), Positives = 107/189 (56%), Gaps = 1/189 (0%)
Frame = +2
Query: 104 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGD-DSFNTFFSETGAG 280
M+E I+V VGQ G QIG WE EHG+Q DG T K G + +++ E
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDG---TYKGDNGSQLERITSYYKEMEGR 57
Query: 281 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVL 460
K+VPRA+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD VL
Sbjct: 58 KYVPRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKVL 117
Query: 461 DRIRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPT 640
IR+ A+ L+GF + H LL+ +L +Y K+ +I P+ +V
Sbjct: 118 SVIRREAEAADSLEGFQLIHSLGGGTGSGLGSLLISKLREEYSDKTLSTCSIIPSAKVSD 177
Query: 641 AVVEPYNSI 667
VVEPYN+I
Sbjct: 178 TVVEPYNAI 186
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 88.2 bits (209), Expect = 7e-18
Identities = 58/186 (31%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Frame = +2
Query: 116 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGKHVPR 295
++VHVGQ G Q+ A W+ EHGI GQ + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 296 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 466
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 467 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPT-A 643
I + A+ L G L H LL+ERL + KK ++++ T
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 644 VVEPYN 661
VV PYN
Sbjct: 184 VVHPYN 189
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 88.2 bits (209), Expect = 7e-18
Identities = 58/186 (31%), Positives = 90/186 (48%), Gaps = 4/186 (2%)
Frame = +2
Query: 116 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGKHVPR 295
++VHVGQ G Q+ A W+ EHGI GQ + +D + F + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDM---NDKKDLLFYQADDDHYVPR 64
Query: 296 AVFVDLEPTVVD-EVRTGTYRQLFHPEQLITGKE--DAANNYARGHYTIGKEIVDLVLDR 466
AV VDLEP V++ +++ + LF+ + + A NN+A G Y G+E+ + ++D
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFNTDNIFMSDHGGGAGNNWASG-YCQGQEVQEKIMDI 123
Query: 467 IRKLADQCTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVPT-A 643
I + A+ L G L H LL+ERL + KK ++++ T
Sbjct: 124 IIREAENTNNLDGILFTHSVSGGTGSGTGSLLLERLREAFPKKVIQTYSVFANSDTSTDV 183
Query: 644 VVEPYN 661
VV PYN
Sbjct: 184 VVHPYN 189
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.60
Identities = 18/52 (34%), Positives = 31/52 (59%)
Frame = +3
Query: 132 AKPESRSVMPAGSFTAWSTASSLMARCPQPRPSGVETILSTLSSARPELAST 287
A P MP+ S + S++SS M + P+P S ++T+L+++ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPEP--SSLDTVLTSMMNNNEEAAST 238
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 146 QIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 325
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 326 VDE 334
DE
Sbjct: 116 ADE 118
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 146 QIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 325
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 81 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 133
Query: 326 VDE 334
DE
Sbjct: 134 ADE 136
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 29.1 bits (62), Expect = 4.2
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = +2
Query: 146 QIGNACWELYCLEHGIQPDGQMPTAKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTV 325
QI +C CL +G++P G P I G FF+++G ++ F ++ P
Sbjct: 63 QICRSCRHKKCLSNGMKPGGVQPKKPNIETG----RAFFTKSGLKRN---KKFANVSPQT 115
Query: 326 VDE 334
DE
Sbjct: 116 ADE 118
>AL110485-19|CAB60367.2| 529|Caenorhabditis elegans Hypothetical
protein Y46G5A.24 protein.
Length = 529
Score = 28.3 bits (60), Expect = 7.4
Identities = 19/63 (30%), Positives = 30/63 (47%)
Frame = -3
Query: 637 GNLRRGVDGELQFRLLAVVNGETLHQ*GSEPRAGTSTEGVEDQESLQTGTLVSELADSVQ 458
GNL V +L+F + N E HQ EP + EG+E+ + G L+ + S +
Sbjct: 435 GNLAGVVKADLKFGNHLIWNRENPHQICGEPIFVPNPEGIEEDD----GILIVPIMSSSE 490
Query: 457 NQI 449
Q+
Sbjct: 491 KQV 493
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 28.3 bits (60), Expect = 7.4
Identities = 14/32 (43%), Positives = 17/32 (53%)
Frame = -3
Query: 394 FLTSNKLFWMKQLSVCASADLINNSRFKIDED 299
FL K F K ++VC S LI R+ DED
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDED 263
>AF067945-11|AAV28330.1| 1604|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform g protein.
Length = 1604
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 323 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 625 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 670
>AF067945-10|AAV28329.1| 1818|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform f protein.
Length = 1818
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 323 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 839 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 884
>AF067945-9|AAV28328.1| 1954|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform e protein.
Length = 1954
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 323 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 975 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1020
>AF067945-6|AAV28326.1| 1167|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform c protein.
Length = 1167
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 323 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-5|AAV28325.1| 1685|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform b protein.
Length = 1685
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 323 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1024 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1069
>AF067945-4|AAV28327.1| 1995|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform d protein.
Length = 1995
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 323 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1016 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1061
>AF067945-3|AAV28331.1| 2006|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform h protein.
Length = 2006
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 323 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1027 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1072
>AF067945-2|AAV28324.1| 2007|Caenorhabditis elegans Mechanosensory
abnormality protein1, isoform a protein.
Length = 2007
Score = 27.9 bits (59), Expect = 9.8
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 323 VVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 466
VV +++TG + PE+ + E A+N+Y + Y + K V ++D+
Sbjct: 1028 VVHDMKTGEHPGYTKPEEFVRRIESASNDYIK--YDLQKPDVVTIIDK 1073
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,604,052
Number of Sequences: 27780
Number of extensions: 373475
Number of successful extensions: 912
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 891
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2139963672
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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