Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_O08
         (831 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X68408-1|CAA48471.1|  723|Drosophila melanogaster SSRP1 protein.      220   2e-57
BT004831-1|AAO45187.1|  723|Drosophila melanogaster SD06504p pro...   220   2e-57
AE013599-3689|AAF47064.1|  723|Drosophila melanogaster CG4817-PA...   220   2e-57
L08825-1|AAA28914.1|  723|Drosophila melanogaster single-strande...   218   7e-57
AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA...    29   7.8  

>X68408-1|CAA48471.1|  723|Drosophila melanogaster SSRP1 protein.
          Length = 723

 Score =  220 bits (537), Expect = 2e-57
 Identities = 106/188 (56%), Positives = 135/188 (71%)
 Frame = +1

Query: 265 GRLKMTDQNIIFKNSKTGKVEQISANDIELVNFQKFIGSWGLRLFLKNGTLHRYGGFKEG 444
           GRLKMT+QNIIFKN+KTGKVEQISA DI+L+N QKF+G+WGLR+F K G LHR+ GF++ 
Sbjct: 21  GRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDS 80

Query: 445 EQEKVAKFFKANYNKDMLEKELSLKGWNWGTAKFNGAVLSFNVGTNTAFEIPLHYVSQCN 624
           E EK+ KF KA Y+++M+EKE+ +KGWNWGTA+F G+VLSF+  + T FE+PL +VSQC 
Sbjct: 81  EHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCV 140

Query: 625 TGKNEVTLEFHQNDDTPXIIDGNALPHSHQ*SGQ*FGCS*SIPXQVXNKASVIXVXGDAX 804
           TGKNEVTLEFHQNDD P  +           S +           V +KASVI   G++ 
Sbjct: 141 TGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESAEEDPVD-KFHQNVMSKASVISASGESI 199

Query: 805 AIXREXNV 828
           AI RE  +
Sbjct: 200 AIFREIQI 207


>BT004831-1|AAO45187.1|  723|Drosophila melanogaster SD06504p
           protein.
          Length = 723

 Score =  220 bits (537), Expect = 2e-57
 Identities = 106/188 (56%), Positives = 135/188 (71%)
 Frame = +1

Query: 265 GRLKMTDQNIIFKNSKTGKVEQISANDIELVNFQKFIGSWGLRLFLKNGTLHRYGGFKEG 444
           GRLKMT+QNIIFKN+KTGKVEQISA DI+L+N QKF+G+WGLR+F K G LHR+ GF++ 
Sbjct: 21  GRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDS 80

Query: 445 EQEKVAKFFKANYNKDMLEKELSLKGWNWGTAKFNGAVLSFNVGTNTAFEIPLHYVSQCN 624
           E EK+ KF KA Y+++M+EKE+ +KGWNWGTA+F G+VLSF+  + T FE+PL +VSQC 
Sbjct: 81  EHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCV 140

Query: 625 TGKNEVTLEFHQNDDTPXIIDGNALPHSHQ*SGQ*FGCS*SIPXQVXNKASVIXVXGDAX 804
           TGKNEVTLEFHQNDD P  +           S +           V +KASVI   G++ 
Sbjct: 141 TGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESAEEDPVD-KFHQNVMSKASVISASGESI 199

Query: 805 AIXREXNV 828
           AI RE  +
Sbjct: 200 AIFREIQI 207


>AE013599-3689|AAF47064.1|  723|Drosophila melanogaster CG4817-PA
           protein.
          Length = 723

 Score =  220 bits (537), Expect = 2e-57
 Identities = 106/188 (56%), Positives = 135/188 (71%)
 Frame = +1

Query: 265 GRLKMTDQNIIFKNSKTGKVEQISANDIELVNFQKFIGSWGLRLFLKNGTLHRYGGFKEG 444
           GRLKMT+QNIIFKN+KTGKVEQISA DI+L+N QKF+G+WGLR+F K G LHR+ GF++ 
Sbjct: 21  GRLKMTEQNIIFKNTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDS 80

Query: 445 EQEKVAKFFKANYNKDMLEKELSLKGWNWGTAKFNGAVLSFNVGTNTAFEIPLHYVSQCN 624
           E EK+ KF KA Y+++M+EKE+ +KGWNWGTA+F G+VLSF+  + T FE+PL +VSQC 
Sbjct: 81  EHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCV 140

Query: 625 TGKNEVTLEFHQNDDTPXIIDGNALPHSHQ*SGQ*FGCS*SIPXQVXNKASVIXVXGDAX 804
           TGKNEVTLEFHQNDD P  +           S +           V +KASVI   G++ 
Sbjct: 141 TGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESAEEDPVD-KFHQNVMSKASVISASGESI 199

Query: 805 AIXREXNV 828
           AI RE  +
Sbjct: 200 AIFREIQI 207


>L08825-1|AAA28914.1|  723|Drosophila melanogaster single-stranded
           recognition proteinprotein.
          Length = 723

 Score =  218 bits (533), Expect = 7e-57
 Identities = 105/188 (55%), Positives = 135/188 (71%)
 Frame = +1

Query: 265 GRLKMTDQNIIFKNSKTGKVEQISANDIELVNFQKFIGSWGLRLFLKNGTLHRYGGFKEG 444
           GRLKMT+QNIIF+N+KTGKVEQISA DI+L+N QKF+G+WGLR+F K G LHR+ GF++ 
Sbjct: 21  GRLKMTEQNIIFENTKTGKVEQISAEDIDLINSQKFVGTWGLRVFTKGGVLHRFTGFRDS 80

Query: 445 EQEKVAKFFKANYNKDMLEKELSLKGWNWGTAKFNGAVLSFNVGTNTAFEIPLHYVSQCN 624
           E EK+ KF KA Y+++M+EKE+ +KGWNWGTA+F G+VLSF+  + T FE+PL +VSQC 
Sbjct: 81  EHEKLGKFIKAAYSQEMVEKEMCVKGWNWGTARFMGSVLSFDKESKTIFEVPLSHVSQCV 140

Query: 625 TGKNEVTLEFHQNDDTPXIIDGNALPHSHQ*SGQ*FGCS*SIPXQVXNKASVIXVXGDAX 804
           TGKNEVTLEFHQNDD P  +           S +           V +KASVI   G++ 
Sbjct: 141 TGKNEVTLEFHQNDDAPVGLLEMRFHIPAVESAEEDPVD-KFHQNVMSKASVISASGESI 199

Query: 805 AIXREXNV 828
           AI RE  +
Sbjct: 200 AIFREIQI 207


>AE014298-1399|AAF46544.1| 4498|Drosophila melanogaster CG2989-PA
           protein.
          Length = 4498

 Score = 29.1 bits (62), Expect = 7.8
 Identities = 17/57 (29%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
 Frame = +1

Query: 397 FLKNGTLHRYGGFKEGEQEKVAKFFKAN-YNKDMLEKELSLKGWNWGTAKFNGAVLS 564
           F K+  +  +  +++ EQ   AKF     YNK  L+  +++ GWN  +++F+  V S
Sbjct: 91  FTKDNQMKPFDKYQDIEQGGYAKFTGLKTYNKQ-LKTMIAIGGWNEASSRFSPLVAS 146


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,946,494
Number of Sequences: 53049
Number of extensions: 654518
Number of successful extensions: 1236
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1195
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1236
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3942192384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)