Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_O05
         (846 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF101318-1|AAC69342.2|  356|Caenorhabditis elegans Hypothetical ...    30   2.4  
Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical pr...    29   5.5  
AL132862-15|CAB60549.1|  703|Caenorhabditis elegans Hypothetical...    28   9.6  

>AF101318-1|AAC69342.2|  356|Caenorhabditis elegans Hypothetical
           protein Y73C8C.4 protein.
          Length = 356

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +3

Query: 489 VRGICLSRIRTTEHMLCYCATVDGSDHDPQNRS 587
           V  +CL+ +RT E    +   +D   HDPQN +
Sbjct: 280 VFNLCLNEVRTREDAKTFPCFIDEKFHDPQNNT 312


>Z69717-1|CAA93531.1| 1391|Caenorhabditis elegans Hypothetical
           protein E01G6.1 protein.
          Length = 1391

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 20/47 (42%), Positives = 23/47 (48%), Gaps = 4/47 (8%)
 Frame = +1

Query: 490 SGXSVCQGSEQQSICC--VTA-PQSTAVTTTPRTEAGARLP-ERDDC 618
           SG S  + S  QSICC  VTA P +      P T +      ERDDC
Sbjct: 556 SGASCVKSSTNQSICCKAVTACPDNRIPYNIPGTNSVVACSIERDDC 602


>AL132862-15|CAB60549.1|  703|Caenorhabditis elegans Hypothetical
           protein Y73F8A.21 protein.
          Length = 703

 Score = 27.9 bits (59), Expect = 9.6
 Identities = 10/26 (38%), Positives = 15/26 (57%)
 Frame = -1

Query: 717 PGYESMDAGAPPTILSPTXMSRPQHF 640
           PGY  ++AG  P +  P    +PQ+F
Sbjct: 593 PGYPPLNAGYTPNVNYPNLYQQPQYF 618


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,053,817
Number of Sequences: 27780
Number of extensions: 456440
Number of successful extensions: 1153
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1082
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1150
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)