Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_O03
         (901 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_04_0017 + 12297539-12297697,12298191-12298229,12298457-122988...    32   0.71 
02_04_0054 + 19279579-19280772                                         32   0.71 
12_01_0889 - 8567209-8567490,8567539-8568009,8568116-8568136           31   1.6  
12_02_0279 - 16704284-16704925                                         30   2.9  
03_04_0175 - 18092055-18092583,18092819-18093378                       29   3.8  
01_02_0007 + 10132380-10133201                                         25   4.8  
12_02_0043 + 12762257-12762678,12762751-12762778                       29   5.0  
09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116...    29   6.7  

>11_04_0017 +
           12297539-12297697,12298191-12298229,12298457-12298825,
           12298921-12299058
          Length = 234

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 15/41 (36%), Positives = 21/41 (51%)
 Frame = -2

Query: 330 QVPRAGLRRRGGRSEDVQKQGRV*GRVLGETDCYQHRQQKR 208
           +VP A ++  GGR  D +  GR+ G   G   C   RQ K+
Sbjct: 2   EVPAASVKGGGGRRSDEEAPGRIAGNGAGNVACLFTRQGKK 42


>02_04_0054 + 19279579-19280772
          Length = 397

 Score = 31.9 bits (69), Expect = 0.71
 Identities = 19/63 (30%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
 Frame = -2

Query: 465 RHAGVINVHPFIVLVTQIVGDAFARFPVLIRKHAVALRRLNDDVFQVPRAGL--RRRGGR 292
           RH G+  +   +   T ++ +A+    +L+ KHA  L  + ++   V RA L  RRR  R
Sbjct: 316 RHPGIFYLSRVLGTQTVVLREAYGGGSLLLAKHAHPLATIREEYSAVMRAALPPRRRRSR 375

Query: 291 SED 283
             D
Sbjct: 376 ESD 378


>12_01_0889 - 8567209-8567490,8567539-8568009,8568116-8568136
          Length = 257

 Score = 30.7 bits (66), Expect = 1.6
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +1

Query: 481 DVRFGEEDCQESVEICCTNPITEPVPKPQPDPS 579
           D+RF ++D  E++E     P+++P  +P+P PS
Sbjct: 166 DLRFIQKDSGETLEFHSKEPLSQPPIEPEPCPS 198


>12_02_0279 - 16704284-16704925
          Length = 213

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 15/51 (29%), Positives = 26/51 (50%)
 Frame = +1

Query: 496 EEDCQESVEICCTNPITEPVPKPQPDPSKLKGCGYRNPMGGRSDHHRXGVG 648
           +ED  E++E+    P ++P  KP+P PS  +G    + +   S  H   +G
Sbjct: 72  KEDSGETLELLSREPASQPPIKPKPCPSGSQGIVLDSYLETTSIFHNASLG 122


>03_04_0175 - 18092055-18092583,18092819-18093378
          Length = 362

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 12/33 (36%), Positives = 22/33 (66%)
 Frame = +1

Query: 481 DVRFGEEDCQESVEICCTNPITEPVPKPQPDPS 579
           D+RF ++D  E++E+    P ++P  +P+P PS
Sbjct: 226 DLRFIQKDSGETLELHSKEPPSQPPIEPEPCPS 258


>01_02_0007 + 10132380-10133201
          Length = 273

 Score = 25.4 bits (53), Expect(2) = 4.8
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = +1

Query: 535 NPITEPVPKPQPDP 576
           NP  +P+P+PQP P
Sbjct: 67  NPQPQPLPQPQPQP 80



 Score = 22.2 bits (45), Expect(2) = 4.8
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = +1

Query: 550 PVPKPQPDPSKLKG 591
           P P+PQP P  L G
Sbjct: 88  PQPQPQPQPLPLPG 101


>12_02_0043 + 12762257-12762678,12762751-12762778
          Length = 149

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +1

Query: 481 DVRFGEEDCQESVEICCTNPITEPVPKPQPDPS 579
           D+ F +ED  E++E+    P ++P  +P+P PS
Sbjct: 17  DLHFIQEDSGETLELHSKEPPSQPPIEPEPCPS 49


>09_01_0079 -
           1159963-1160211,1160303-1160509,1160631-1160801,
           1161732-1161869,1162184-1162273,1162354-1162431,
           1162510-1163166,1163245-1163363,1164305-1164584
          Length = 662

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 18/48 (37%), Positives = 22/48 (45%), Gaps = 1/48 (2%)
 Frame = +1

Query: 547 EPVPKPQPDPSKLKGCGYRNPMG-GRSDHHRXGVGXGGXXXAEFPWGG 687
           +P+P  Q       G GYR P G G  D    GVG GG   + +  GG
Sbjct: 503 QPMPMGQQQMMARGGRGYRYPTGRGMPDPAMHGVG-GGVMPSPYEMGG 549


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,246,757
Number of Sequences: 37544
Number of extensions: 474305
Number of successful extensions: 1905
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1461
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1881
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)