Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_O01
(876 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 32 0.62
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 31 1.1
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 31 1.1
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 31 1.1
U53141-8|AAA96110.3| 572|Caenorhabditis elegans Prion-like-(q/n... 30 1.9
U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcript... 29 4.4
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 31.9 bits (69), Expect = 0.62
Identities = 21/68 (30%), Positives = 33/68 (48%)
Frame = -1
Query: 456 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTN 277
ST +T S TES+ TS T + ESTTE+ S S + + T + +T+
Sbjct: 189 STTTTTATSTTESTSTSTDSTTTESTTESTTESTSTSTDSTTT-ESTTESTTESTSTSTD 247
Query: 276 SNSSVSAA 253
S ++ S +
Sbjct: 248 STTTESTS 255
Score = 30.3 bits (65), Expect = 1.9
Identities = 20/63 (31%), Positives = 30/63 (47%)
Frame = -1
Query: 456 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTN 277
+T ST S TES+ TS T + ESTTE+ S S + ++ + + TT
Sbjct: 209 TTTESTTESTTESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTSTSTDSTTTESTTE 268
Query: 276 SNS 268
S +
Sbjct: 269 STT 271
Score = 29.5 bits (63), Expect = 3.3
Identities = 16/35 (45%), Positives = 20/35 (57%)
Frame = -1
Query: 456 STRVSTRISATESSITSEAQTAAAAKGESTTETES 352
ST ST + TES+ TS T + ESTTE+ S
Sbjct: 241 STSTSTDSTTTESTSTSTDSTTTESTTESTTESTS 275
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -1
Query: 456 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTN 277
+T ++ +E++ + A TAA ES T TES V+ +G+A + AT +TT
Sbjct: 182 ATTAASTTKDSETTTEASATTAATTTQESITTTES-DSVTTTEGSATTGAATTKDSVTTT 240
Query: 276 SNS 268
S
Sbjct: 241 EGS 243
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -1
Query: 456 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTN 277
+T ++ +E++ + A TAA ES T TES V+ +G+A + AT +TT
Sbjct: 182 ATTAASTTKDSETTTEASATTAATTTQESITTTES-DSVTTTEGSATTGAATTKDSVTTT 240
Query: 276 SNS 268
S
Sbjct: 241 EGS 243
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -1
Query: 456 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTN 277
+T ++ +E++ + A TAA ES T TES V+ +G+A + AT +TT
Sbjct: 182 ATTAASTTKDSETTTEASATTAATTTQESITTTES-DSVTTTEGSATTGAATTKDSVTTT 240
Query: 276 SNS 268
S
Sbjct: 241 EGS 243
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/63 (31%), Positives = 32/63 (50%)
Frame = -1
Query: 456 STRVSTRISATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTN 277
+T ++ +E++ + A TAA ES T TES V+ +G+A + AT +TT
Sbjct: 182 ATTAASTTKDSETTTEASATTAATTTQESITTTES-DSVTTTEGSATTGAATTKDSVTTT 240
Query: 276 SNS 268
S
Sbjct: 241 EGS 243
>U53141-8|AAA96110.3| 572|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 13
protein.
Length = 572
Score = 30.3 bits (65), Expect = 1.9
Identities = 19/61 (31%), Positives = 25/61 (40%)
Frame = -1
Query: 429 ATESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTNSNSSVSAAD 250
A + + SEA + A ESTTE+ SA K T N ++VS A
Sbjct: 18 AADGTTKSEASSTTVATSESTTESTKTTTASAIKETVKEEVKEKEGPETRNETAAVSRAK 77
Query: 249 R 247
R
Sbjct: 78 R 78
>U29536-2|AAA68790.1| 759|Caenorhabditis elegans Brf (transcription
factor) homologprotein 1 protein.
Length = 759
Score = 29.1 bits (62), Expect = 4.4
Identities = 18/64 (28%), Positives = 26/64 (40%)
Frame = -1
Query: 426 TESSITSEAQTAAAAKGESTTETESIRRVSAAKGNAASRKAT*GSRMTTNSNSSVSAADR 247
TES + + A GE+ E E +R G +K + T S S SA ++
Sbjct: 447 TESEVAIKTDYWMKANGEAMKEIEEKKRERELNGGVKKKKPRSNRKTDTTSTSVASAVEK 506
Query: 246 GRAE 235
AE
Sbjct: 507 VIAE 510
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,644,116
Number of Sequences: 27780
Number of extensions: 162801
Number of successful extensions: 642
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 593
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 638
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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