Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_N14
         (847 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical pr...    58   8e-09
Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical pr...    29   5.5  
AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical ...    29   5.5  

>U40800-9|AAA81494.1|  316|Caenorhabditis elegans Hypothetical
           protein D2096.8 protein.
          Length = 316

 Score = 58.0 bits (134), Expect = 8e-09
 Identities = 39/129 (30%), Positives = 54/129 (41%)
 Frame = +3

Query: 330 VDIEAKFYSEVHAXXXXXXXXXXXXXXXRALIVNGTYEPNDDECLNPWRDDTEEEELARA 509
           + IE+ FY  VH                R  IV G  EP  ++   P  +  E ++LA  
Sbjct: 41  IQIESDFYKRVHELEIEFEGKFKSTFDQRKAIVAGEVEPTKEQIDTPILEGLEGDQLAEL 100

Query: 510 VQNAAITEGEEKKDDKAIEPPMDPNVKGIPDFWYNIFRNVSMLSEMMQEHDEPILXCLQD 689
                          KA E   DP+ KGI DFW    R   +++E ++EHD PIL  L D
Sbjct: 101 Y--------------KAAEA--DPSAKGIKDFWLTALRTHDLVAEAIEEHDVPILSYLTD 144

Query: 690 IKVQMHEDP 716
           +     +DP
Sbjct: 145 VTTAASKDP 153


>Z46829-1|CAA86862.1|  375|Caenorhabditis elegans Hypothetical
           protein T14B1.1 protein.
          Length = 375

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/38 (34%), Positives = 22/38 (57%)
 Frame = +3

Query: 465 NPWRDDTEEEELARAVQNAAITEGEEKKDDKAIEPPMD 578
           +P RD+  EE LA+ ++  A   GE+++ +   EP  D
Sbjct: 6   DPGRDEEVEEPLAKKIRVVAQEAGEDEESEMEKEPNAD 43


>AF025469-5|AAG00029.1| 2054|Caenorhabditis elegans Hypothetical
            protein W09B6.1a protein.
          Length = 2054

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 20/82 (24%), Positives = 37/82 (45%), Gaps = 3/82 (3%)
 Frame = +3

Query: 486  EEEELARAVQNAAI---TEGEEKKDDKAIEPPMDPNVKGIPDFWYNIFRNVSMLSEMMQE 656
            +EE+     QNA +   T  E++     +   +  N + +P     IF  V +  + +  
Sbjct: 1101 QEEQRVCYAQNAVVDMKTILEKEFRVNRVNTVLCLNDRPLPQL--TIFEQVRLEKDRLPA 1158

Query: 657  HDEPILXCLQDIKVQMHEDPIS 722
            +  P+L  L  ++V  H+DP S
Sbjct: 1159 NSYPVLSKLSTVRVSQHDDPTS 1180


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,406,706
Number of Sequences: 27780
Number of extensions: 310097
Number of successful extensions: 799
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 758
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 798
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)