Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_N13
(864 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_0578 + 4295386-4296489,4297394-4297507 175 5e-44
03_06_0298 - 32925441-32925998,32926371-32926730,32927161-329272... 174 9e-44
12_02_0634 + 21416205-21416954 34 0.17
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722... 34 0.17
10_02_0199 + 6668902-6669293,6669825-6669882 34 0.17
06_02_0298 + 13921310-13921834,13921923-13922063,13923601-139239... 33 0.22
01_06_0604 + 30536172-30537143 33 0.29
08_02_1278 - 25838146-25839411 32 0.68
11_01_0763 + 6402901-6403971,6404581-6404826 31 0.90
03_05_0366 - 23505755-23506441 31 1.2
07_01_0172 - 1201595-1201912,1202637-1202723,1202836-1202895,120... 30 2.7
01_03_0131 - 12858377-12858664,12859585-12859975,12863357-128633... 30 2.7
04_01_0208 + 2596110-2596928 29 4.8
11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067 29 6.3
06_02_0233 + 13315579-13316046 29 6.3
04_01_0588 + 7657510-7657992,7658397-7658843 29 6.3
03_05_0452 + 24464134-24464442 29 6.3
02_04_0457 + 23093020-23093343,23093798-23093806 29 6.3
10_08_0894 - 21365629-21365766,21365849-21365950,21366042-213662... 28 8.4
10_07_0029 + 12031711-12032464,12044289-12044386 28 8.4
>07_01_0578 + 4295386-4296489,4297394-4297507
Length = 405
Score = 175 bits (425), Expect = 5e-44
Identities = 78/109 (71%), Positives = 89/109 (81%)
Frame = +1
Query: 178 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 357
VF+AP+RPD+V VH +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR
Sbjct: 31 VFRAPLRPDVVRFVHRLLSCNKRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHR 90
Query: 358 SGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSSRCCYWRPS 504
+GQGAFGNMCRGGRMFAPTK WR+WHRRVN+ RR A+ S+ PS
Sbjct: 91 AGQGAFGNMCRGGRMFAPTKTWRKWHRRVNVHLRRVAVASALAATSVPS 139
Score = 85.4 bits (202), Expect = 5e-17
Identities = 39/76 (51%), Positives = 53/76 (69%)
Frame = +2
Query: 515 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 694
ARGH IE +PELPLV++D + I KT QA+ L+++ A++D K S +R GKGKMRN
Sbjct: 143 ARGHRIETVPELPLVISDSAESIEKTSQAIKILKQVGAYADAEKAKDSVGIRPGKGKMRN 202
Query: 695 RRRIQRXGPLIIFNXD 742
RR I R GPLI++ +
Sbjct: 203 RRYINRKGPLIVYGTE 218
>03_06_0298 -
32925441-32925998,32926371-32926730,32927161-32927230,
32927642-32927797,32929181-32929242,32929339-32929352,
32930421-32930520,32931474-32932574
Length = 806
Score = 174 bits (423), Expect = 9e-44
Identities = 79/109 (72%), Positives = 88/109 (80%)
Frame = +1
Query: 178 VFKAPIRPDLVNDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGTHR 357
V +APIRPD+V H +S N RQPY VS+ AGHQTSAESWGTGRAV+RIPRV GGGTHR
Sbjct: 30 VLRAPIRPDVVTFTHKLLSCNRRQPYAVSRRAGHQTSAESWGTGRAVSRIPRVPGGGTHR 89
Query: 358 SGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSSRCCYWRPS 504
+GQGAFGNMCRGGRMFAPTK WRRWHRRVN+R RR A+ S+ PS
Sbjct: 90 AGQGAFGNMCRGGRMFAPTKIWRRWHRRVNIRLRRIAVASALAATAVPS 138
Score = 85.8 bits (203), Expect = 4e-17
Identities = 39/76 (51%), Positives = 54/76 (71%)
Frame = +2
Query: 515 ARGHIIEKIPELPLVVADKVQEINKTKQAVIFLRRLKAWSDILKVYKSQRLRAGKGKMRN 694
ARGH IE +PE PLVV+D ++ I KT Q++ L+++ A++D K S +RAGKGKMRN
Sbjct: 142 ARGHRIEGVPEFPLVVSDSIESIEKTAQSIKVLKQIGAYADAEKTKDSVAIRAGKGKMRN 201
Query: 695 RRRIQRXGPLIIFNXD 742
RR I R GPLI++ +
Sbjct: 202 RRYINRKGPLIVYGTE 217
>12_02_0634 + 21416205-21416954
Length = 249
Score = 33.9 bits (74), Expect = 0.17
Identities = 29/89 (32%), Positives = 33/89 (37%), Gaps = 2/89 (2%)
Frame = +1
Query: 262 SKEAGHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKP-WRRWHR 438
S +AG A TG A GG + G RG KP WRRW R
Sbjct: 157 SCDAGRGGGAAGGCTGEAGGA---AGGGRLGEKRRATAGRQLRGSPRETEGKPGWRRWRR 213
Query: 439 RVNLRQR-RAALGSSRCCYWRPSARSG*R 522
R R+R R L WRP+ G R
Sbjct: 214 RWRRRRRGRTTLRRGGRGGWRPAGNVGER 242
>12_02_0030 +
12469707-12469902,12470337-12470658,12472208-12472245,
12472486-12473573
Length = 547
Score = 33.9 bits (74), Expect = 0.17
Identities = 22/69 (31%), Positives = 29/69 (42%)
Frame = +1
Query: 301 GTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSS 480
G G A + RV GGG+ G+GA + G + W R +RR G+S
Sbjct: 84 GAGGRGAGVRRVEGGGSGAVGEGARAAVLGGAATIGARRLWAGGAARGGFGRRR---GAS 140
Query: 481 RCCYWRPSA 507
WRP A
Sbjct: 141 STHAWRPGA 149
>10_02_0199 + 6668902-6669293,6669825-6669882
Length = 149
Score = 33.9 bits (74), Expect = 0.17
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +1
Query: 289 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGR 399
A+SW TGRA A + R R GG R A N G R
Sbjct: 36 AQSWATGRAAAELGRGRKGGRRRGLAQAAANSGEGNR 72
>06_02_0298 +
13921310-13921834,13921923-13922063,13923601-13923951,
13924071-13924130,13924261-13924380,13924569-13924718
Length = 448
Score = 33.5 bits (73), Expect = 0.22
Identities = 12/19 (63%), Positives = 15/19 (78%)
Frame = -2
Query: 395 PPRHMLPKAP*PDLWVPPP 339
PPRH++P+ P P WVPPP
Sbjct: 308 PPRHLVPRGPAPP-WVPPP 325
>01_06_0604 + 30536172-30537143
Length = 323
Score = 33.1 bits (72), Expect = 0.29
Identities = 25/76 (32%), Positives = 31/76 (40%)
Frame = +1
Query: 376 GNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALGSSRCCYWRPSARSG*RTHY*KDSRASL 555
G C FA P RW R ++ RR + SSR R + S Y +DSR +L
Sbjct: 133 GRKCPPSTPFAAAPPLARWKERASVSSRRLSTHSSR----RLMSSSSSDDEYDEDSR-NL 187
Query: 556 GCSRQSPGDQQDQTGC 603
SR D D C
Sbjct: 188 FSSRSFSSDSSDFYNC 203
>08_02_1278 - 25838146-25839411
Length = 421
Score = 31.9 bits (69), Expect = 0.68
Identities = 15/36 (41%), Positives = 23/36 (63%)
Frame = -3
Query: 619 APQEDDSLFGLVDLLDFVGYNQGKLGNLFNNVSSSL 512
A +E LF L+D+LD V +G+L LF+ S++L
Sbjct: 89 AAREPQRLFRLLDMLDAVARERGRLDELFSGESATL 124
>11_01_0763 + 6402901-6403971,6404581-6404826
Length = 438
Score = 31.5 bits (68), Expect = 0.90
Identities = 23/66 (34%), Positives = 28/66 (42%)
Frame = +1
Query: 289 AESWGTGRAVARIPRVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAA 468
AE W R AR R+R G G + RG + + W WH R R+R A
Sbjct: 116 AERWRRRRREAR-GRLRPAARLVKGNGGGASGSRGCGLRQQWRQWLLWHGR---RRRGYA 171
Query: 469 LGSSRC 486
GSS C
Sbjct: 172 FGSSGC 177
>03_05_0366 - 23505755-23506441
Length = 228
Score = 31.1 bits (67), Expect = 1.2
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +1
Query: 175 FVFKAPIRPDLVNDVHVSMSKNSR-QPYCVSKEAGHQTSAESWGTGRAVARIPRVRGGGT 351
++ AP D +V S + R P C S E + +AES TG A R R+ G T
Sbjct: 108 WIHAAPTAADDEKEVARSNAHARRPDPRCPSDEEDEEEAAESGATGLAHTRAGRIHAGPT 167
Query: 352 HRSGQGA 372
+ + + A
Sbjct: 168 NDNDEEA 174
>07_01_0172 -
1201595-1201912,1202637-1202723,1202836-1202895,
1203007-1203106,1203227-1203633,1204728-1204883,
1204981-1205106,1205503-1205572,1205679-1205767
Length = 470
Score = 29.9 bits (64), Expect = 2.7
Identities = 18/50 (36%), Positives = 25/50 (50%)
Frame = -1
Query: 258 AVGLPRVLGHRNVNIIDQVRTYGRLEYEXGGAWLHPAPSHSSLNTPTLKV 109
A P+++ ++ DQ G LE G HPAP + SL +P LKV
Sbjct: 47 ACNQPKLILQLESHLKDQQVVRGALEKALGPDPDHPAPVNLSLESPMLKV 96
>01_03_0131 -
12858377-12858664,12859585-12859975,12863357-12863397,
12864745-12865419
Length = 464
Score = 29.9 bits (64), Expect = 2.7
Identities = 25/64 (39%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Frame = +1
Query: 298 WGTGRAVARIPRVR-GGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRRAALG 474
WG R R R GGG G+GA + GG A P HRR+ L AA G
Sbjct: 147 WGLRWLARRSSRGRSGGGVRGGGRGAAADPAMGGA--ATAFPLALAHRRLFLLLLLAA-G 203
Query: 475 SSRC 486
SS C
Sbjct: 204 SSSC 207
>04_01_0208 + 2596110-2596928
Length = 272
Score = 29.1 bits (62), Expect = 4.8
Identities = 24/81 (29%), Positives = 28/81 (34%), Gaps = 3/81 (3%)
Frame = +1
Query: 274 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAF-GNMCRGGRMFAPTKP-WRRWHRRVN 447
G + E GR GGG + A G R +P WRRW RR
Sbjct: 123 GCEAEGEDGAAGRRSGEEGEAAGGGRRGGKRRAMAGTRLRRSPCETEGRPGWRRWRRRWR 182
Query: 448 LRQR-RAALGSSRCCYWRPSA 507
R+R R G WR A
Sbjct: 183 RRRRDRPVHGRGGTGGWRRPA 203
>11_01_0388 + 2933006-2934173,2934312-2934371,2934877-2935067
Length = 472
Score = 28.7 bits (61), Expect = 6.3
Identities = 17/58 (29%), Positives = 33/58 (56%), Gaps = 2/58 (3%)
Frame = -3
Query: 769 CXXSASQTLIXVEDYEGSXTL--DTTTVAHFTLTSTKTLRLVHLKDIRPCLEAPQEDD 602
C + + ED +GS + DTT++ + +L++ ++L LV +K ++P L E+D
Sbjct: 224 CVHNEDELHAFFEDCKGSVIVSCDTTSMYYKSLSTLQSLLLVCVKKLQPKLVVTIEED 281
>06_02_0233 + 13315579-13316046
Length = 155
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/44 (40%), Positives = 22/44 (50%)
Frame = +1
Query: 331 RVRGGGTHRSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQRR 462
R RG H +G FG GGR+ A + RW RR R+RR
Sbjct: 60 RGRGRRPHPAGTAVFGGGV-GGRLSAERR--SRWQRRPARRERR 100
>04_01_0588 + 7657510-7657992,7658397-7658843
Length = 309
Score = 28.7 bits (61), Expect = 6.3
Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 3/77 (3%)
Frame = +1
Query: 211 NDVHVSMSKNSRQPYCVSKEAGHQTSAESWGTGRAVARIPRV---RGGGTHRSGQGAFGN 381
+D+ ++ SR + + ++S+ W G R+ + GGG R G
Sbjct: 201 HDIQWGDNQPSRSSGVLPSSSEWRSSSSRWDLGEITRRMDTLDMQMGGGQQRRPPAEDGL 260
Query: 382 MCRGGRMFAPTKPWRRW 432
P PWRRW
Sbjct: 261 GWASSWFGRPNLPWRRW 277
>03_05_0452 + 24464134-24464442
Length = 102
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/34 (38%), Positives = 20/34 (58%)
Frame = +3
Query: 231 VQELEAALLREQGGWSPNQCRIMGYRTCCCPNSA 332
V+++ ++LLR G Q ++G R C C NSA
Sbjct: 21 VEKVRSSLLRVLGLLRGGQASMLGKRACFCSNSA 54
>02_04_0457 + 23093020-23093343,23093798-23093806
Length = 110
Score = 28.7 bits (61), Expect = 6.3
Identities = 16/35 (45%), Positives = 17/35 (48%)
Frame = +1
Query: 274 GHQTSAESWGTGRAVARIPRVRGGGTHRSGQGAFG 378
G + S W G A A VRGGG RSG G G
Sbjct: 76 GRRRSQPRWRGGAAAAEAD-VRGGGARRSGGGDEG 109
>10_08_0894 -
21365629-21365766,21365849-21365950,21366042-21366284,
21366685-21366813,21366999-21367103,21367196-21367387,
21367486-21367639,21368148-21368209,21368291-21368437,
21368517-21368564,21369091-21369228,21369305-21369451,
21370579-21370665,21370754-21370861,21370941-21371041,
21371870-21371996,21372820-21372936,21373029-21373106,
21373240-21373284,21373637-21373756,21373838-21373964,
21374033-21374253,21374347-21374529,21374772-21374924,
21375051-21375146,21375226-21375331,21375410-21375492,
21375576-21375728,21375819-21376058,21376367-21376414,
21376782-21376928,21377007-21377115,21377200-21377345,
21377715-21377809,21377944-21378049,21378177-21378368,
21378456-21378686,21378772-21378866,21379426-21379529,
21380040-21380284,21380300-21380347,21380376-21380480,
21380630-21380767,21381458-21381649,21381738-21381914,
21382001-21382129,21382203-21382316,21382407-21382746,
21382836-21383064,21383155-21383455,21384311-21384358,
21387963-21388355
Length = 2493
Score = 28.3 bits (60), Expect = 8.4
Identities = 27/95 (28%), Positives = 37/95 (38%), Gaps = 3/95 (3%)
Frame = +1
Query: 184 KAPIRPDLVNDVHVSMSKNSRQPYCVSKEA---GHQTSAESWGTGRAVARIPRVRGGGTH 354
+A R D +D +V+ + R+ + A G + S G R+ GGG
Sbjct: 40 EAAARADGDDDGYVARRRRGREGKAEATTAARGGGRRSGRGRGWDERWRRLGFFGGGGRG 99
Query: 355 RSGQGAFGNMCRGGRMFAPTKPWRRWHRRVNLRQR 459
R G+G G RG R WRR R R R
Sbjct: 100 RGGRGGRG---RGARGAGGGGAWRRRRERGRERMR 131
>10_07_0029 + 12031711-12032464,12044289-12044386
Length = 283
Score = 28.3 bits (60), Expect = 8.4
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 400 YVHHDTCYRRHPDRTYG 350
Y+ HDT YR HP R G
Sbjct: 94 YIFHDTAYRYHPRRANG 110
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,770,804
Number of Sequences: 37544
Number of extensions: 532885
Number of successful extensions: 1844
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 1718
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1837
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2420970504
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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