Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_N12
(845 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical p... 33 0.26
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr... 33 0.26
Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical pr... 33 0.34
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 32 0.45
AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical ... 31 0.78
AF067219-4|AAC17028.1| 82|Caenorhabditis elegans Hypothetical ... 31 0.78
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.0
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 2.4
Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical pr... 29 4.2
AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical ... 29 4.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 4.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 4.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 4.2
Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical pr... 29 5.5
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 29 5.5
U58732-7|AAB00597.1| 345|Caenorhabditis elegans Taf (tbp-associ... 29 5.5
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 29 5.5
DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein. 29 5.5
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 29 5.5
Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical pr... 28 7.3
Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical pr... 28 7.3
L23648-11|AAA28027.2| 244|Caenorhabditis elegans Hypothetical p... 28 7.3
AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein. 28 7.3
AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical ... 28 7.3
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 28 7.3
AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen pro... 28 7.3
Z50070-7|CAA90396.1| 87|Caenorhabditis elegans Hypothetical pr... 28 9.6
Z35663-13|CAA84729.1| 234|Caenorhabditis elegans Hypothetical p... 28 9.6
AL021487-3|CAA16354.1| 75|Caenorhabditis elegans Hypothetical ... 28 9.6
AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein. 28 9.6
AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical ... 28 9.6
AC024792-6|AAF60686.2| 901|Caenorhabditis elegans Hypothetical ... 28 9.6
>Z70307-12|CAA94340.1| 405|Caenorhabditis elegans Hypothetical
protein C39E9.11 protein.
Length = 405
Score = 33.1 bits (72), Expect = 0.26
Identities = 28/93 (30%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Frame = +1
Query: 451 PPNKRPKMIRDPFQGPSDSTADGFSNLDMFDLEKDLPDELMGGPWGEQPGVPGPKPPAQG 630
P K P D GP+D GFS+ E ++P E+ V GP P +G
Sbjct: 203 PAPKLPDDSDDDDDGPTDFF--GFSSAPTRK-ESEIPSEIPYMTMNSSMDVVGPSRPDEG 259
Query: 631 LGPGQM--APQQQFN-GDDPAAA---MHRQINN 711
+ P QM P+++ + + P+A+ +HR+IN+
Sbjct: 260 MDPRQMYEMPEEEEDVQEGPSASNAWLHRKIND 292
>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical
protein F57C7.1b protein.
Length = 1087
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 442 ADEPPNKRPKMIRDPFQGPSDSTADGFSNLDMFD-LEKDLPDELMGGPWGEQPGVPGPKP 618
++E P+K+P+ +++ S + GF +D + +E + D+ + G + PG K
Sbjct: 191 SEEVPDKKPESVKESTDSESSGSEHGFEKMDTAEKVEDECNDDEVAASNGTEEPEPGDK- 249
Query: 619 PAQGLGPGQMAPQQQFNG 672
A + P + Q+ +G
Sbjct: 250 AADTVNPWETPRQEPVDG 267
>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical
protein F57C7.1a protein.
Length = 1209
Score = 33.1 bits (72), Expect = 0.26
Identities = 18/78 (23%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Frame = +1
Query: 442 ADEPPNKRPKMIRDPFQGPSDSTADGFSNLDMFD-LEKDLPDELMGGPWGEQPGVPGPKP 618
++E P+K+P+ +++ S + GF +D + +E + D+ + G + PG K
Sbjct: 191 SEEVPDKKPESVKESTDSESSGSEHGFEKMDTAEKVEDECNDDEVAASNGTEEPEPGDK- 249
Query: 619 PAQGLGPGQMAPQQQFNG 672
A + P + Q+ +G
Sbjct: 250 AADTVNPWETPRQEPVDG 267
>Z68752-1|CAA92981.1| 928|Caenorhabditis elegans Hypothetical protein
T12G3.2a protein.
Length = 928
Score = 32.7 bits (71), Expect = 0.34
Identities = 25/100 (25%), Positives = 34/100 (34%)
Frame = +1
Query: 403 NIHDGLRLVNRAMADEPPNKRPKMIRDPFQGPSDSTADGFSNLDMFDLEKDLPDELMGGP 582
+I+D + A A N P MI P D + F+L + D L
Sbjct: 823 SIYDSSHHIPLAPAPIARNMGPTMISPPPAKVRPPAVDTYPRSSQFELVRSDSDHLPPSN 882
Query: 583 WGEQPGVPGPKPPAQGLGPGQMAPQQQFNGDDPAAAMHRQ 702
+ PKPP+Q P Q +N P H Q
Sbjct: 883 TMMRVSCSPPKPPSQLPSPNQTTIPHMYNNGIPMIYEHHQ 922
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 32.3 bits (70), Expect = 0.45
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 5/39 (12%)
Frame = -1
Query: 680 GSSPLNCC*GAICPGP-----NPCAGGLGPGTPGCSPHG 579
G++ +CC C GP NPC GG GP P P G
Sbjct: 20 GATQNSCCPPPQCCGPPPACGNPCGGGFGPPPPPFGPVG 58
>AL033536-4|CAA22144.2| 1582|Caenorhabditis elegans Hypothetical
protein Y53C10A.10 protein.
Length = 1582
Score = 31.5 bits (68), Expect = 0.78
Identities = 25/84 (29%), Positives = 28/84 (33%), Gaps = 1/84 (1%)
Frame = +1
Query: 577 GPWG-EQPGVPGPKPPAQGLGPGQMAPQQQFNGDDPAAAMHRQINNHLLQVFSQGNKSGL 753
GP G P PGP P + P + P DP N S NK G
Sbjct: 1298 GPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNGP-----SDPNKPGP 1352
Query: 754 XGHNDPXXXXXXXXKSPNLQSPPN 825
G N+P PN S PN
Sbjct: 1353 NGPNEPSDPNKPGPNGPNGSSDPN 1376
Score = 30.7 bits (66), Expect = 1.4
Identities = 30/112 (26%), Positives = 39/112 (34%), Gaps = 1/112 (0%)
Frame = +1
Query: 493 GPSDSTADGFSNL-DMFDLEKDLPDELMGGPWGEQPGVPGPKPPAQGLGPGQMAPQQQFN 669
GPSD G + + D K P+ G +PG GP P+ PG P + +
Sbjct: 1119 GPSDPNKPGPNGPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNESSD 1178
Query: 670 GDDPAAAMHRQINNHLLQVFSQGNKSGLXGHNDPXXXXXXXXKSPNLQSPPN 825
+ P + S NK G G N P PN S PN
Sbjct: 1179 PNKPGPNGPNEP--------SDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPN 1222
Score = 29.9 bits (64), Expect = 2.4
Identities = 32/112 (28%), Positives = 38/112 (33%), Gaps = 1/112 (0%)
Frame = +1
Query: 493 GPSDSTADGFSNL-DMFDLEKDLPDELMGGPWGEQPGVPGPKPPAQGLGPGQMAPQQQFN 669
GPSD G + + D K P+ G +PG GP P+ PG P +
Sbjct: 1203 GPSDPNKPGPNGPNEPSDPNKPGPNGSNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEP-- 1260
Query: 670 GDDPAAAMHRQINNHLLQVFSQGNKSGLXGHNDPXXXXXXXXKSPNLQSPPN 825
DP N L NK G G N P PN S PN
Sbjct: 1261 -SDPNRPGPNGPNGPL-----DPNKPGPNGPNGPSDPNKPGPNGPNGPSDPN 1306
Score = 29.5 bits (63), Expect = 3.1
Identities = 25/84 (29%), Positives = 27/84 (32%), Gaps = 1/84 (1%)
Frame = +1
Query: 577 GPWG-EQPGVPGPKPPAQGLGPGQMAPQQQFNGDDPAAAMHRQINNHLLQVFSQGNKSGL 753
GP G P PGP P P + P DP N S NK G
Sbjct: 1046 GPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGP-----SDPNKPGP 1100
Query: 754 XGHNDPXXXXXXXXKSPNLQSPPN 825
G N+P PN S PN
Sbjct: 1101 NGPNEPSDPNKPGPNGPNGPSDPN 1124
Score = 29.1 bits (62), Expect = 4.2
Identities = 31/112 (27%), Positives = 36/112 (32%), Gaps = 1/112 (0%)
Frame = +1
Query: 493 GPSDSTADGFSNLD-MFDLEKDLPDELMGGPWGEQPGVPGPKPPAQGLGPGQMAPQQQFN 669
GPSD G + + D K P+ G P PGP P + P + P
Sbjct: 1147 GPSDPNKPGPNGPNGPSDPNKPGPN---GPNESSDPNKPGPNGPNEPSDPNKPGPNGPNG 1203
Query: 670 GDDPAAAMHRQINNHLLQVFSQGNKSGLXGHNDPXXXXXXXXKSPNLQSPPN 825
DP N S NK G G N P PN S PN
Sbjct: 1204 PSDPNKPGPNGPNEP-----SDPNKPGPNGSNGPSDPNKPGPNGPNGPSDPN 1250
Score = 28.7 bits (61), Expect = 5.5
Identities = 25/84 (29%), Positives = 27/84 (32%), Gaps = 1/84 (1%)
Frame = +1
Query: 577 GPWG-EQPGVPGPKPPAQGLGPGQMAPQQQFNGDDPAAAMHRQINNHLLQVFSQGNKSGL 753
GP G P PGP P + P + P DP N S NK G
Sbjct: 1242 GPNGPSDPNKPGPNGPNEPSDPNRPGPNGPNGPLDPNKPGPNGPNGP-----SDPNKPGP 1296
Query: 754 XGHNDPXXXXXXXXKSPNLQSPPN 825
G N P PN S PN
Sbjct: 1297 NGPNGPSDPNKPGPNGPNEPSDPN 1320
Score = 27.9 bits (59), Expect = 9.6
Identities = 22/77 (28%), Positives = 24/77 (31%)
Frame = +1
Query: 595 PGVPGPKPPAQGLGPGQMAPQQQFNGDDPAAAMHRQINNHLLQVFSQGNKSGLXGHNDPX 774
P PGP P P + P DP N S NK G G N+P
Sbjct: 1081 PNKPGPNGPNGPSDPNKPGPNGPNEPSDPNKPGPNGPNGP-----SDPNKPGPNGPNEPS 1135
Query: 775 XXXXXXXKSPNLQSPPN 825
PN S PN
Sbjct: 1136 DPNKPGPNGPNGPSDPN 1152
Score = 27.9 bits (59), Expect = 9.6
Identities = 31/112 (27%), Positives = 35/112 (31%), Gaps = 1/112 (0%)
Frame = +1
Query: 493 GPSDSTADGFSNL-DMFDLEKDLPDELMGGPWGEQPGVPGPKPPAQGLGPGQMAPQQQFN 669
GPSD G + + D K P+ G P PGP P P + P
Sbjct: 1161 GPSDPNKPGPNGPNESSDPNKPGPN---GPNEPSDPNKPGPNGPNGPSDPNKPGPNGPNE 1217
Query: 670 GDDPAAAMHRQINNHLLQVFSQGNKSGLXGHNDPXXXXXXXXKSPNLQSPPN 825
DP N S NK G G N P PN S PN
Sbjct: 1218 PSDPNKPGPNGSNGP-----SDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPN 1264
Score = 27.9 bits (59), Expect = 9.6
Identities = 31/111 (27%), Positives = 37/111 (33%), Gaps = 1/111 (0%)
Frame = +1
Query: 496 PSDSTADGFSNLD-MFDLEKDLPDELMGGPWGEQPGVPGPKPPAQGLGPGQMAPQQQFNG 672
PSD G + + D K P+ G +PG GP P+ PG P +
Sbjct: 1260 PSDPNRPGPNGPNGPLDPNKPGPNGPNGPSDPNKPGPNGPNGPSDPNKPGPNGPNEP--- 1316
Query: 673 DDPAAAMHRQINNHLLQVFSQGNKSGLXGHNDPXXXXXXXXKSPNLQSPPN 825
DP N S NK G G N P PN S PN
Sbjct: 1317 SDPNKPGPNGPNGP-----SDPNKPGPNGPNGPSDPNKPGPNGPNEPSDPN 1362
>AF067219-4|AAC17028.1| 82|Caenorhabditis elegans Hypothetical
protein R12E2.7 protein.
Length = 82
Score = 31.5 bits (68), Expect = 0.78
Identities = 17/43 (39%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = -1
Query: 695 CIAAAGSSPLNCC*GAICPGPNPCAGGLGP--GTPGCSPHGPP 573
C+ +G CC A NPC GGLGP P P PP
Sbjct: 20 CLGGSGGG--GCCPQAQPSCGNPCGGGLGPAGAGPAAYPVAPP 60
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -1
Query: 695 CIAAAGSSPLNCC*GAIC-PGPNPCAGGLGPGTPGCSPHG 579
C G C G C P P PC GG G G GC G
Sbjct: 55 CGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGG 94
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 653 GAICPGPNPCAGGLGPGTPGCSPHG 579
G P P PC GG G G GC G
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGG 70
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 31.1 bits (67), Expect = 1.0
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = -1
Query: 695 CIAAAGSSPLNCC*GAIC-PGPNPCAGGLGPGTPGCSPHG 579
C G C G C P P PC GG G G GC G
Sbjct: 55 CGGGCGGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGG 94
Score = 30.3 bits (65), Expect = 1.8
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -1
Query: 653 GAICPGPNPCAGGLGPGTPGCSPHG 579
G P P PC GG G G GC G
Sbjct: 46 GGCAPPPAPCGGGCGGGGGGCGGGG 70
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/25 (44%), Positives = 12/25 (48%)
Frame = -1
Query: 647 ICPGPNPCAGGLGPGTPGCSPHGPP 573
+CP P PC P P C P PP
Sbjct: 53 VCPPPPPCPAQFCPPPPICPPPPPP 77
>Z74033-3|CAA98477.1| 407|Caenorhabditis elegans Hypothetical
protein F38B7.3 protein.
Length = 407
Score = 29.1 bits (62), Expect = 4.2
Identities = 14/27 (51%), Positives = 15/27 (55%)
Frame = +1
Query: 592 QPGVPGPKPPAQGLGPGQMAPQQQFNG 672
+P P P P QG PG PQQQ NG
Sbjct: 136 KPANPPPNAPQQG--PGAQPPQQQNNG 160
>AF026205-5|AAB71258.1| 880|Caenorhabditis elegans Hypothetical
protein T23E7.2b protein.
Length = 880
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/81 (20%), Positives = 34/81 (41%)
Frame = +1
Query: 445 DEPPNKRPKMIRDPFQGPSDSTADGFSNLDMFDLEKDLPDELMGGPWGEQPGVPGPKPPA 624
D ++ P + + P ++ DG +L D E + + + P + PA
Sbjct: 63 DRTEDQVPDITGTEYVDPMTTSMDGIEDLPAND-EAQVEESAPADEPAPEEEKPQEEAPA 121
Query: 625 QGLGPGQMAPQQQFNGDDPAA 687
+ P + APQ++ ++P A
Sbjct: 122 EEPAPAEEAPQEEVPAEEPVA 142
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 559 PDELMGGPWGEQPGVPGPKPPAQGLGPGQMAPQQQFNGDDPAA 687
P G P + G P P PP +G P P Q G P A
Sbjct: 282 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 324
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 559 PDELMGGPWGEQPGVPGPKPPAQGLGPGQMAPQQQFNGDDPAA 687
P G P + G P P PP +G P P Q G P A
Sbjct: 303 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 345
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.1 bits (62), Expect = 4.2
Identities = 15/43 (34%), Positives = 17/43 (39%)
Frame = +1
Query: 559 PDELMGGPWGEQPGVPGPKPPAQGLGPGQMAPQQQFNGDDPAA 687
P G P + G P P PP +G P P Q G P A
Sbjct: 288 PPPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPA 330
>Z38112-7|CAA86231.3| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 711 IIDLSVHSSCRIISIELLLRGHLPRPQSLRRGLGARN--SRLLTPWTSH*FIREVL 550
I+D+++H+ +++ L HLP PQ L N LLT T H +++ ++
Sbjct: 1309 ILDMNLHTGNQLLPTVAQLLIHLPSPQKLASDQNVTNYSLALLTQHTRHLWLQSLI 1364
>Z38112-6|CAA86235.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 711 IIDLSVHSSCRIISIELLLRGHLPRPQSLRRGLGARN--SRLLTPWTSH*FIREVL 550
I+D+++H+ +++ L HLP PQ L N LLT T H +++ ++
Sbjct: 90 ILDMNLHTGNQLLPTVAQLLIHLPSPQKLASDQNVTNYSLALLTQHTRHLWLQSLI 145
>Z35637-8|CAO82018.1| 2089|Caenorhabditis elegans Hypothetical protein
E03A3.6 protein.
Length = 2089
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 711 IIDLSVHSSCRIISIELLLRGHLPRPQSLRRGLGARN--SRLLTPWTSH*FIREVL 550
I+D+++H+ +++ L HLP PQ L N LLT T H +++ ++
Sbjct: 1309 ILDMNLHTGNQLLPTVAQLLIHLPSPQKLASDQNVTNYSLALLTQHTRHLWLQSLI 1364
>Z35637-7|CAA84690.2| 870|Caenorhabditis elegans Hypothetical
protein E03A3.6b protein.
Length = 870
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 711 IIDLSVHSSCRIISIELLLRGHLPRPQSLRRGLGARN--SRLLTPWTSH*FIREVL 550
I+D+++H+ +++ L HLP PQ L N LLT T H +++ ++
Sbjct: 90 ILDMNLHTGNQLLPTVAQLLIHLPSPQKLASDQNVTNYSLALLTQHTRHLWLQSLI 145
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = -1
Query: 638 GPNPCAGGLGPGTPGCSPHGPPIXXXXXXXXXXXXXXFENPSAVESEGP*KGSLIIFGRL 459
G N C G G G+ G SP+G E SA G GS FG
Sbjct: 76 GGNTCGSGFGGGSTGGSPYGGASSGFGGSTATSGFGSGEKSSAFGGSGGFGGSATGFGS- 134
Query: 458 LGGSS 444
GG S
Sbjct: 135 -GGGS 138
>U58732-7|AAB00597.1| 345|Caenorhabditis elegans Taf
(tbp-associated transcriptionfactor) family protein 11.1
protein.
Length = 345
Score = 28.7 bits (61), Expect = 5.5
Identities = 22/76 (28%), Positives = 33/76 (43%), Gaps = 8/76 (10%)
Frame = +1
Query: 421 RLVNRAMADEPPNKRPKMIRDPFQGPS------DSTADGFSNLDMFDLEK--DLPDELMG 576
R +++ EPP K+P+ + GPS D D +L+ FDL K D + +
Sbjct: 140 RKIDKISKSEPPRKQPRHDDNSEAGPSGQISGDDDLLDTNISLESFDLSKVNDARYQALI 199
Query: 577 GPWGEQPGVPGPKPPA 624
+ PGP PA
Sbjct: 200 QQHQPEEEAPGPSRPA 215
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = -1
Query: 638 GPNPCAGGLGPGTPGCSPHGPPIXXXXXXXXXXXXXXFENPSAVESEGP*KGSLIIFGRL 459
G N C G G G+ G SP+G E SA G GS FG
Sbjct: 76 GGNTCGSGFGGGSTGGSPYGGASSGFGGSTATSGFGSGEKSSAFGGSGGFGGSATGFGS- 134
Query: 458 LGGSS 444
GG S
Sbjct: 135 -GGGS 138
>DQ858354-1|ABI14559.1| 2084|Caenorhabditis elegans UNC-79 protein.
Length = 2084
Score = 28.7 bits (61), Expect = 5.5
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -3
Query: 711 IIDLSVHSSCRIISIELLLRGHLPRPQSLRRGLGARN--SRLLTPWTSH*FIREVL 550
I+D+++H+ +++ L HLP PQ L N LLT T H +++ ++
Sbjct: 1312 ILDMNLHTGNQLLPTVAQLLIHLPSPQKLASDQNVTNYSLALLTQHTRHLWLQSLI 1367
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 28.7 bits (61), Expect = 5.5
Identities = 21/65 (32%), Positives = 23/65 (35%)
Frame = -1
Query: 638 GPNPCAGGLGPGTPGCSPHGPPIXXXXXXXXXXXXXXFENPSAVESEGP*KGSLIIFGRL 459
G N C G G G+ G SP+G E SA G GS FG
Sbjct: 76 GGNTCGSGFGGGSTGGSPYGGASSGFGGSTATSGFGSGEKSSAFGGSGGFGGSATGFGS- 134
Query: 458 LGGSS 444
GG S
Sbjct: 135 -GGGS 138
>Z35639-8|CAI46560.1| 634|Caenorhabditis elegans Hypothetical
protein D2045.1b protein.
Length = 634
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +1
Query: 559 PDELMGGPWGEQ--PGVPGPKPPAQGLGPGQMAPQQQFNGDDPAAAMH 696
P M P G+Q P GP PP Q Q QQQF+G+ H
Sbjct: 366 PQVYMMPPQGQQQQPRYQGPPPPQQQ--QQQQPQQQQFSGEQSRPQSH 411
>Z35639-7|CAA84697.3| 959|Caenorhabditis elegans Hypothetical
protein D2045.1a protein.
Length = 959
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +1
Query: 559 PDELMGGPWGEQ--PGVPGPKPPAQGLGPGQMAPQQQFNGDDPAAAMH 696
P M P G+Q P GP PP Q Q QQQF+G+ H
Sbjct: 691 PQVYMMPPQGQQQQPRYQGPPPPQQQ--QQQQPQQQQFSGEQSRPQSH 736
>L23648-11|AAA28027.2| 244|Caenorhabditis elegans Hypothetical
protein F44B9.9 protein.
Length = 244
Score = 28.3 bits (60), Expect = 7.3
Identities = 9/28 (32%), Positives = 19/28 (67%)
Frame = -3
Query: 705 DLSVHSSCRIISIELLLRGHLPRPQSLR 622
+ +V+ +CR+++I L++RGH P +
Sbjct: 141 EAAVNETCRLLNISLIVRGHQMMPAGFK 168
>AY571963-1|AAS78587.1| 959|Caenorhabditis elegans ATX-2 protein.
Length = 959
Score = 28.3 bits (60), Expect = 7.3
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +1
Query: 559 PDELMGGPWGEQ--PGVPGPKPPAQGLGPGQMAPQQQFNGDDPAAAMH 696
P M P G+Q P GP PP Q Q QQQF+G+ H
Sbjct: 691 PQVYMMPPQGQQQQPRYQGPPPPQQQ--QQQQPQQQQFSGEQSRPQSH 736
>AF038605-2|AAB92020.1| 698|Caenorhabditis elegans Hypothetical
protein C02B10.5 protein.
Length = 698
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +1
Query: 586 GEQPGVPGPKPPAQGLGPGQMAPQQQFNGDDPAAA 690
G QPG PG PP + PG M P G P A
Sbjct: 573 GGQPGHPGMMPPGM-MPPGMMPPGMMPPGMHPGMA 606
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 28.3 bits (60), Expect = 7.3
Identities = 15/40 (37%), Positives = 19/40 (47%), Gaps = 4/40 (10%)
Frame = +1
Query: 595 PGVPG----PKPPAQGLGPGQMAPQQQFNGDDPAAAMHRQ 702
PG+PG P PP G P Q P F+ + P M +Q
Sbjct: 710 PGIPGYPPAPPPPGVGPPPPQGIPPMGFDPNKPPPPMFQQ 749
>AC084197-24|AAM44390.1| 297|Caenorhabditis elegans Collagen
protein 112 protein.
Length = 297
Score = 28.3 bits (60), Expect = 7.3
Identities = 20/38 (52%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
Frame = +1
Query: 574 GGPWGE-QPGVPGPK-PPAQGLGPGQMAPQQQFN-GDD 678
GGP + QPG PGPK PP PG AP Q N G D
Sbjct: 170 GGPGQDGQPGQPGPKGPPGVNGQPG--APGQDGNPGQD 205
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/38 (44%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 577 GPWGEQPGVPG-PKPPAQGLGPGQMAPQQQFNGDDPAA 687
GP G PGV G P P Q PGQ AP + +P A
Sbjct: 182 GPKGP-PGVNGQPGAPGQDGNPGQDAPSEPLVPGEPGA 218
>Z50070-7|CAA90396.1| 87|Caenorhabditis elegans Hypothetical
protein F43G6.7 protein.
Length = 87
Score = 27.9 bits (59), Expect = 9.6
Identities = 18/48 (37%), Positives = 21/48 (43%), Gaps = 6/48 (12%)
Frame = +1
Query: 565 ELMGGPWGE---QPGVPGPKPPAQGLGPGQMAPQQQFNG---DDPAAA 690
E+ GPW QP PG +P P + P Q G D PAAA
Sbjct: 11 EIGPGPWPSLESQPPAPGDQPVQGPADPAMLPPPHQQPGQAPDPPAAA 58
>Z35663-13|CAA84729.1| 234|Caenorhabditis elegans Hypothetical
protein T04A8.10 protein.
Length = 234
Score = 27.9 bits (59), Expect = 9.6
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +1
Query: 445 DEPPNKRPKMIRDPFQGPSDSTADGFSN 528
DEPPNK+ K + P QGP+ D F +
Sbjct: 63 DEPPNKKQKEV--PNQGPTTLPTDFFDD 88
>AL021487-3|CAA16354.1| 75|Caenorhabditis elegans Hypothetical
protein Y45F10B.3 protein.
Length = 75
Score = 27.9 bits (59), Expect = 9.6
Identities = 17/53 (32%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Frame = +1
Query: 514 DGFSNLDMFDLEKDLPDELMG--GPWGEQPGVPGPKPPAQGLGPGQMAPQQQF 666
D N DL+ D+ DEL G P + P P PPA A + Q+
Sbjct: 11 DAIGNHKNTDLDVDIDDELFGKKPPKTAEAPKPAPPPPAPAPAAAPSAGKYQY 63
>AF326941-1|AAG49391.1| 139|Caenorhabditis elegans 5H1 protein.
Length = 139
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +1
Query: 571 MGGPWGEQPGVPGP--KPPAQGLGPGQMAPQQQFNG 672
+GGP PG+ GP P G GPG P ++ G
Sbjct: 50 IGGPGLGGPGIGGPGLGGPGVGGGPGAFGPYGRYGG 85
>AF125955-7|AAD14713.1| 139|Caenorhabditis elegans Hypothetical
protein F46E10.2 protein.
Length = 139
Score = 27.9 bits (59), Expect = 9.6
Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Frame = +1
Query: 571 MGGPWGEQPGVPGP--KPPAQGLGPGQMAPQQQFNG 672
+GGP PG+ GP P G GPG P ++ G
Sbjct: 50 IGGPGLGGPGIGGPGLGGPGVGGGPGAFGPYGRYGG 85
>AC024792-6|AAF60686.2| 901|Caenorhabditis elegans Hypothetical
protein Y48G1A.1 protein.
Length = 901
Score = 27.9 bits (59), Expect = 9.6
Identities = 10/32 (31%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Frame = +2
Query: 245 YLSENYNMCLLRCEGHRTIVMWV--NYIMMND 334
+ +NYN +L+ + +R + W+ NY+ ND
Sbjct: 371 HFHQNYNQEVLKFQSNRLLFQWIYPNYLFQND 402
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,738,161
Number of Sequences: 27780
Number of extensions: 457993
Number of successful extensions: 1695
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1317
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1652
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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