Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_N04
         (843 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_01_0790 + 6617659-6619593,6619696-6620106                           31   1.1  
05_03_0373 - 13194723-13195847,13196219-13196809                       31   1.1  
03_02_0647 + 10154668-10156041                                         29   6.1  
12_01_0951 - 9471391-9471597,9471857-9471966,9473173-9473278,947...    28   8.1  
10_08_0849 + 21040043-21040199,21040620-21040678,21040925-210424...    28   8.1  

>11_01_0790 + 6617659-6619593,6619696-6620106
          Length = 781

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 3/53 (5%)
 Frame = +3

Query: 510 NIFSNWLEEKVDLPSIFENISEVPE---RVDPQPPGSGSSFKSFCDLAAH*RT 659
           N F N  E ++ + +  E ++ +     R+D QP G+  SF  FC  A H RT
Sbjct: 205 NAFQNLQESRIVITTRKEEVAALASSKYRLDLQPLGNTDSFNLFCRRAFHGRT 257


>05_03_0373 - 13194723-13195847,13196219-13196809
          Length = 571

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 14/32 (43%), Positives = 20/32 (62%)
 Frame = -2

Query: 470 VSEFGGTWFQLRR*WRVETRGVIDFDLRCSAR 375
           V+E G  + QL+R WR + RG++D D R   R
Sbjct: 502 VNEAGQRFLQLQREWRSDARGIVDGDGRFKFR 533


>03_02_0647 + 10154668-10156041
          Length = 457

 Score = 28.7 bits (61), Expect = 6.1
 Identities = 18/45 (40%), Positives = 22/45 (48%)
 Frame = -3

Query: 679 PFRIPAAVLQWAARSQKDLKLEPLPGGCGSTRSGTSEMFSKIEGR 545
           PF  P AVL WAA S  D   +    G    RS   EM ++ +GR
Sbjct: 277 PFPSPRAVLDWAAASMSDSDSD--DSGGAEARS-EHEMMARAKGR 318


>12_01_0951 -
           9471391-9471597,9471857-9471966,9473173-9473278,
           9474719-9475060,9475598-9475647,9476745-9477717
          Length = 595

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 14/31 (45%), Positives = 16/31 (51%)
 Frame = +3

Query: 603 PGSGSSFKSFCDLAAH*RTAAGIRNGLWCCR 695
           P  GS   S C +     TA G+  GLWCCR
Sbjct: 397 PSCGSYTASACPIYVESGTA-GVVIGLWCCR 426


>10_08_0849 +
           21040043-21040199,21040620-21040678,21040925-21042494,
           21042583-21042710,21042793-21043033,21043160-21043710
          Length = 901

 Score = 28.3 bits (60), Expect = 8.1
 Identities = 11/40 (27%), Positives = 24/40 (60%)
 Frame = +3

Query: 474 LLQQLDSQCKQENIFSNWLEEKVDLPSIFENISEVPERVD 593
           L+ +L   C ++N+   +LE+++  P +FE +    +R+D
Sbjct: 754 LVLELSELCAEQNLEVWYLEDELISPCMFEELQNQGDRID 793


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,261,849
Number of Sequences: 37544
Number of extensions: 458126
Number of successful extensions: 1218
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1176
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1216
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2338704516
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)