Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_N03
(1005 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 144 7e-35
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 144 7e-35
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 144 7e-35
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 142 3e-34
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 136 2e-32
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 134 1e-31
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 134 1e-31
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 132 5e-31
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 132 5e-31
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 131 9e-31
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 128 6e-30
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 128 8e-30
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 128 8e-30
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 120 1e-27
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 110 2e-24
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 87 1e-17
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 78 1e-14
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 77 2e-14
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 77 3e-14
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 75 1e-13
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 75 1e-13
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 70 2e-12
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 63 3e-10
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 63 3e-10
Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical p... 46 6e-05
AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin... 46 6e-05
AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical ... 32 0.74
U97015-4|AAB52342.1| 245|Caenorhabditis elegans Hypothetical pr... 31 1.7
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 144 bits (350), Expect = 7e-35
Identities = 62/89 (69%), Positives = 71/89 (79%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++ +G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
HVPRAV VDLEPTV+DE+RTGTYR LFHP
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHP 89
Score = 103 bits (248), Expect = 2e-22
Identities = 53/74 (71%), Positives = 56/74 (75%)
Frame = +1
Query: 403 SCFIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWR 582
S F QLITGKEDAANNYARGHYTIGKEI+ L LDRIR+LAD CTGLQGFL+FHS
Sbjct: 85 SLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGG 144
Query: 583 YRLLGSRSXLMERL 624
G S LMERL
Sbjct: 145 TG-SGFTSLLMERL 157
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 144 bits (350), Expect = 7e-35
Identities = 62/89 (69%), Positives = 71/89 (79%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++ +G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
HVPRAV VDLEPTV+DE+RTGTYR LFHP
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHP 89
Score = 103 bits (248), Expect = 2e-22
Identities = 53/74 (71%), Positives = 56/74 (75%)
Frame = +1
Query: 403 SCFIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWR 582
S F QLITGKEDAANNYARGHYTIGKEI+ L LDRIR+LAD CTGLQGFL+FHS
Sbjct: 85 SLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGG 144
Query: 583 YRLLGSRSXLMERL 624
G S LMERL
Sbjct: 145 TG-SGFTSLLMERL 157
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 144 bits (350), Expect = 7e-35
Identities = 62/89 (69%), Positives = 71/89 (79%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++ +G+
Sbjct: 1 MREVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR 60
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
HVPRAV VDLEPTV+DE+RTGTYR LFHP
Sbjct: 61 HVPRAVMVDLEPTVIDEIRTGTYRSLFHP 89
Score = 103 bits (248), Expect = 2e-22
Identities = 53/74 (71%), Positives = 56/74 (75%)
Frame = +1
Query: 403 SCFIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWR 582
S F QLITGKEDAANNYARGHYTIGKEI+ L LDRIR+LAD CTGLQGFL+FHS
Sbjct: 85 SLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGG 144
Query: 583 YRLLGSRSXLMERL 624
G S LMERL
Sbjct: 145 TG-SGFTSLLMERL 157
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 142 bits (345), Expect = 3e-34
Identities = 61/88 (69%), Positives = 70/88 (79%)
Frame = +3
Query: 153 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGKH 332
RE IS+H+GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++ +G+H
Sbjct: 1 REVISIHIGQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGRH 60
Query: 333 VPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
VPRAV VDLEPTV+DE+RTGTYR LFHP
Sbjct: 61 VPRAVMVDLEPTVIDEIRTGTYRSLFHP 88
Score = 103 bits (248), Expect = 2e-22
Identities = 53/74 (71%), Positives = 56/74 (75%)
Frame = +1
Query: 403 SCFIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWR 582
S F QLITGKEDAANNYARGHYTIGKEI+ L LDRIR+LAD CTGLQGFL+FHS
Sbjct: 84 SLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADNCTGLQGFLVFHSFGGG 143
Query: 583 YRLLGSRSXLMERL 624
G S LMERL
Sbjct: 144 TG-SGFTSLLMERL 156
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 136 bits (329), Expect = 2e-32
Identities = 59/89 (66%), Positives = 67/89 (75%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE +S+H+GQAGVQIGNACWELYCLEHGI PDG MP D + +GK
Sbjct: 1 MREIVSIHIGQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
HVPRA+FVDLEPTV+DEVRTGTY +LFHP
Sbjct: 61 HVPRAIFVDLEPTVIDEVRTGTYAKLFHP 89
Score = 90.6 bits (215), Expect = 2e-18
Identities = 44/72 (61%), Positives = 53/72 (73%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWRYR 588
F QLI+GKEDAANNYARGHYTIGKE++ +V+DR+R+L + C LQGFLIFHS
Sbjct: 87 FHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRVRRLTERCQSLQGFLIFHSFGGGTG 146
Query: 589 LLGSRSXLMERL 624
G S +MERL
Sbjct: 147 -SGFTSLVMERL 157
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 134 bits (323), Expect = 1e-31
Identities = 60/89 (67%), Positives = 69/89 (77%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T +G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQST--NEGESFTTFFSDTGSGR 58
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
+VPR++FVDLEPTVVDE+RTGTY++LFHP
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHP 87
Score = 97.1 bits (231), Expect = 2e-20
Identities = 47/72 (65%), Positives = 54/72 (75%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWRYR 588
F Q+ITGKEDAANNYARGHYT+GKE++ VLDRIR+LAD C+GLQGF +FHS
Sbjct: 85 FHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTG 144
Query: 589 LLGSRSXLMERL 624
G S LMERL
Sbjct: 145 -SGFTSLLMERL 155
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 134 bits (323), Expect = 1e-31
Identities = 60/89 (67%), Positives = 69/89 (77%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MPT T +G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPTQST--NEGESFTTFFSDTGSGR 58
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
+VPR++FVDLEPTVVDE+RTGTY++LFHP
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHP 87
Score = 97.1 bits (231), Expect = 2e-20
Identities = 47/72 (65%), Positives = 54/72 (75%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWRYR 588
F Q+ITGKEDAANNYARGHYT+GKE++ VLDRIR+LAD C+GLQGF +FHS
Sbjct: 85 FHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTG 144
Query: 589 LLGSRSXLMERL 624
G S LMERL
Sbjct: 145 -SGFTSLLMERL 155
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 132 bits (318), Expect = 5e-31
Identities = 59/89 (66%), Positives = 69/89 (77%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGN--GR 58
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
+VPR++FVDLEPTVVDE+RTGTY++LFHP
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHP 87
Score = 97.1 bits (231), Expect = 2e-20
Identities = 47/72 (65%), Positives = 54/72 (75%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWRYR 588
F Q+ITGKEDAANNYARGHYT+GKE++ VLDRIR+LAD C+GLQGF +FHS
Sbjct: 85 FHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTG 144
Query: 589 LLGSRSXLMERL 624
G S LMERL
Sbjct: 145 -SGFTSLLMERL 155
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 132 bits (318), Expect = 5e-31
Identities = 59/89 (66%), Positives = 69/89 (77%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+D+ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADGESFTTFFSDTGN--GR 58
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
+VPR++FVDLEPTVVDE+RTGTY++LFHP
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGTYKKLFHP 87
Score = 97.1 bits (231), Expect = 2e-20
Identities = 47/72 (65%), Positives = 54/72 (75%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWRYR 588
F Q+ITGKEDAANNYARGHYT+GKE++ VLDRIR+LAD C+GLQGF +FHS
Sbjct: 85 FHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADNCSGLQGFFVFHSFGGGTG 144
Query: 589 LLGSRSXLMERL 624
G S LMERL
Sbjct: 145 -SGFTSLLMERL 155
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 131 bits (316), Expect = 9e-31
Identities = 60/88 (68%), Positives = 63/88 (71%)
Frame = +3
Query: 153 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGKH 332
RE IS+HVGQAGVQIGNACWEL+CLEHGIQPDG D T GKH
Sbjct: 8 REVISIHVGQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKH 67
Query: 333 VPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
VPR +FVDLEPTVVDEVRTGTYR LFHP
Sbjct: 68 VPRCLFVDLEPTVVDEVRTGTYRSLFHP 95
Score = 85.4 bits (202), Expect = 6e-17
Identities = 42/74 (56%), Positives = 54/74 (72%)
Frame = +1
Query: 403 SCFIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWR 582
S F QL++GKEDAAN YARG YTIG+E++ +V+DR+++LA+ C GLQGF+IFHS
Sbjct: 91 SLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGG 150
Query: 583 YRLLGSRSXLMERL 624
G S LMERL
Sbjct: 151 TG-SGFLSLLMERL 163
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 128 bits (309), Expect = 6e-30
Identities = 55/90 (61%), Positives = 66/90 (73%)
Frame = +3
Query: 147 KMRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAG 326
+ RE IS+HVGQAGVQ+GNACWELYCLEHGIQPDG + + ++ AG
Sbjct: 5 RSREVISIHVGQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAG 64
Query: 327 KHVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
KHVPRA+ VDLEPT +DE+RTGTY+ LFHP
Sbjct: 65 KHVPRAIMVDLEPTPIDEIRTGTYKTLFHP 94
Score = 94.3 bits (224), Expect = 1e-19
Identities = 45/72 (62%), Positives = 54/72 (75%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWRYR 588
F QL+TGKEDAANNYARGHYTIGKEI+ +V+DR+R+L + C GLQGFL+FHS
Sbjct: 92 FHPEQLLTGKEDAANNYARGHYTIGKEIIDVVMDRVRRLVENCRGLQGFLVFHSFGGGTG 151
Query: 589 LLGSRSXLMERL 624
G + LMERL
Sbjct: 152 -SGFTALLMERL 162
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 128 bits (308), Expect = 8e-30
Identities = 57/89 (64%), Positives = 68/89 (76%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQ--QNEGGSFTTFFSDTGNGR 58
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
+VPR++FVDLEPTVVDE+RTG Y++LFHP
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHP 87
Score = 95.5 bits (227), Expect = 5e-20
Identities = 46/72 (63%), Positives = 53/72 (73%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWRYR 588
F Q+ITGKEDAANNYARGHYT+GKE++ LDRIR+LAD C+GLQGF +FHS
Sbjct: 85 FHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTG 144
Query: 589 LLGSRSXLMERL 624
G S LMERL
Sbjct: 145 -SGFTSLLMERL 155
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 128 bits (308), Expect = 8e-30
Identities = 57/89 (64%), Positives = 68/89 (76%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE IS+HVGQAGVQIGNACWELYCLEHGIQPDG MP+++ G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGIQPDGTMPSEQ--QNEGGSFTTFFSDTGNGR 58
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
+VPR++FVDLEPTVVDE+RTG Y++LFHP
Sbjct: 59 YVPRSIFVDLEPTVVDEIRTGNYKKLFHP 87
Score = 95.5 bits (227), Expect = 5e-20
Identities = 46/72 (63%), Positives = 53/72 (73%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWRYR 588
F Q+ITGKEDAANNYARGHYT+GKE++ LDRIR+LAD C+GLQGF +FHS
Sbjct: 85 FHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADNCSGLQGFFVFHSFGGGTG 144
Query: 589 LLGSRSXLMERL 624
G S LMERL
Sbjct: 145 -SGFTSLLMERL 155
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 120 bits (290), Expect = 1e-27
Identities = 56/89 (62%), Positives = 63/89 (70%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE IS+HVGQAGVQIGNACWELYCLEHGI PDG T G+
Sbjct: 1 MREVISIHVGQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
HVPR++FVDLEPTVVDE+RTG Y++LFHP
Sbjct: 58 HVPRSIFVDLEPTVVDEIRTGAYKKLFHP 86
Score = 92.7 bits (220), Expect = 4e-19
Identities = 45/72 (62%), Positives = 52/72 (72%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWRYR 588
F Q++TGKEDAANNYARGHYT+GKEI+ LDRIR+LA+ C GLQGF +FHS
Sbjct: 84 FHPEQMLTGKEDAANNYARGHYTVGKEIIDTTLDRIRRLANNCEGLQGFFVFHSFGGGTG 143
Query: 589 LLGSRSXLMERL 624
G S LMERL
Sbjct: 144 -SGFTSMLMERL 154
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 110 bits (264), Expect = 2e-24
Identities = 47/88 (53%), Positives = 59/88 (67%)
Frame = +3
Query: 153 RECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGKH 332
REC+S+H+GQAG QIGNACWELYC+EHG+ G + ++ GKH
Sbjct: 6 RECVSIHIGQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGKH 64
Query: 333 VPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
VPRA++VDLEPTV+DE+R G Y LFHP
Sbjct: 65 VPRAIYVDLEPTVLDEIRNGVYGNLFHP 92
Score = 92.7 bits (220), Expect = 4e-19
Identities = 46/72 (63%), Positives = 52/72 (72%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWRYR 588
F Q+I GKEDAANNYARGHYTIGKE++ +VLDRIRK + C GLQGFL+FHS
Sbjct: 90 FHPDQIINGKEDAANNYARGHYTIGKELIDVVLDRIRKQTENCEGLQGFLVFHSFGGGTG 149
Query: 589 LLGSRSXLMERL 624
G S LMERL
Sbjct: 150 -SGFSSLLMERL 160
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 87.4 bits (207), Expect = 1e-17
Identities = 40/67 (59%), Positives = 43/67 (64%)
Frame = +3
Query: 216 LYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGKHVPRAVFVDLEPTVVDEVRTGT 395
++CLEHGIQPDG D T GKHVPR +FVDLEPTVVDEVRTGT
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGKHVPRCLFVDLEPTVVDEVRTGT 60
Query: 396 YRQLFHP 416
YR LFHP
Sbjct: 61 YRSLFHP 67
Score = 85.4 bits (202), Expect = 6e-17
Identities = 42/74 (56%), Positives = 54/74 (72%)
Frame = +1
Query: 403 SCFIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWR 582
S F QL++GKEDAAN YARG YTIG+E++ +V+DR+++LA+ C GLQGF+IFHS
Sbjct: 63 SLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNGLQGFVIFHSFGGG 122
Query: 583 YRLLGSRSXLMERL 624
G S LMERL
Sbjct: 123 TG-SGFLSLLMERL 135
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 77.8 bits (183), Expect = 1e-14
Identities = 40/89 (44%), Positives = 49/89 (55%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE + V GQ G QIG+ WE+ EHGIQPDG + + GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGESDLQLERIDVYYNEANN--GK 58
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
+VPRAV VDLEP +D VR+G + QLF P
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Score = 58.4 bits (135), Expect = 7e-09
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSL 573
F + G+ A NN+A+GHYT G E+V VLD IRK A+ C LQGF + HSL
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSL 139
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 77.4 bits (182), Expect = 2e-14
Identities = 40/89 (44%), Positives = 49/89 (55%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE + V GQ G QIG+ WE+ EHGIQPDG + + GK
Sbjct: 1 MREIVHVQAGQCGNQIGSKFWEVISDEHGIQPDGTFKGETDLQLERIDVYYNEANN--GK 58
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
+VPRAV VDLEP +D VR+G + QLF P
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Score = 58.4 bits (135), Expect = 7e-09
Identities = 28/55 (50%), Positives = 35/55 (63%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSL 573
F + G+ A NN+A+GHYT G E+V VLD IRK A+ C LQGF + HSL
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVIRKEAEGCDCLQGFQLTHSL 139
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 76.6 bits (180), Expect = 3e-14
Identities = 40/89 (44%), Positives = 48/89 (53%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE + V GQ G QIG WE+ EHGIQPDG + + GK
Sbjct: 1 MREIVHVQAGQCGNQIGAKFWEVISDEHGIQPDGTYKGESDLQLERINVYYNEAN--GGK 58
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
+VPRAV VDLEP +D VR+G + QLF P
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Score = 58.0 bits (134), Expect = 1e-08
Identities = 27/55 (49%), Positives = 35/55 (63%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSL 573
F + G+ A NN+A+GHYT G E+V VLD +RK A+ C LQGF + HSL
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAEGCDCLQGFQLTHSL 139
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 74.5 bits (175), Expect = 1e-13
Identities = 38/89 (42%), Positives = 48/89 (53%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAG--SNK 58
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
+VPRAV VDLEP +D VR+G + QLF P
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSL 573
F + G+ A NN+A+GHYT G E+V VLD +RK A+ LQGF + HSL
Sbjct: 85 FRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSL 139
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 74.5 bits (175), Expect = 1e-13
Identities = 38/89 (42%), Positives = 48/89 (53%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE + + GQ G QIG+ WE+ EHGI P GQ D + + K
Sbjct: 1 MREIVHIQAGQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDLQLERINVYYNEAG--SNK 58
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
+VPRAV VDLEP +D VR+G + QLF P
Sbjct: 59 YVPRAVLVDLEPGTMDSVRSGPFGQLFRP 87
Score = 53.6 bits (123), Expect = 2e-07
Identities = 26/55 (47%), Positives = 34/55 (61%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSL 573
F + G+ A NN+A+GHYT G E+V VLD +RK A+ LQGF + HSL
Sbjct: 85 FRPDNYVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESTDCLQGFQLTHSL 139
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 70.1 bits (164), Expect = 2e-12
Identities = 37/89 (41%), Positives = 44/89 (49%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
MRE + + GQ G QIG WE+ EHGI P G D + GK
Sbjct: 1 MREIVHIQAGQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDLQLERINVYYNEAS--GGK 58
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
+VPRA VDLEP +D VR G + QLF P
Sbjct: 59 YVPRACLVDLEPGTMDSVRAGPFGQLFRP 87
Score = 57.6 bits (133), Expect = 1e-08
Identities = 27/55 (49%), Positives = 35/55 (63%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSL 573
F + G+ A NN+A+GHYT G E+V VLD +RK A+ C LQGF + HSL
Sbjct: 85 FRPDNFVFGQSGAGNNWAKGHYTEGAELVDNVLDVVRKEAESCDCLQGFQMTHSL 139
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 63.3 bits (147), Expect = 3e-10
Identities = 35/89 (39%), Positives = 45/89 (50%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
M+E I+V VGQ G QIG WE EHG+Q DG D K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
+VPRA+ VDL+P ++ VR+ Y +LF P
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDP 87
Score = 49.2 bits (112), Expect = 5e-06
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSL 573
F ++G+ A NN++RG+Y G EIV VL IR+ A+ L+GF + HSL
Sbjct: 85 FDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSL 139
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 63.3 bits (147), Expect = 3e-10
Identities = 35/89 (39%), Positives = 45/89 (50%)
Frame = +3
Query: 150 MRECISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGK 329
M+E I+V VGQ G QIG WE EHG+Q DG D K
Sbjct: 1 MKEIINVQVGQCGNQIGAKFWEYISEEHGLQTDGTYKGDN--GSQLERITSYYKEMEGRK 58
Query: 330 HVPRAVFVDLEPTVVDEVRTGTYRQLFHP 416
+VPRA+ VDL+P ++ VR+ Y +LF P
Sbjct: 59 YVPRAILVDLDPESINYVRSTQYGKLFDP 87
Score = 49.2 bits (112), Expect = 5e-06
Identities = 23/55 (41%), Positives = 33/55 (60%)
Frame = +1
Query: 409 FIQSQLITGKEDAANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSL 573
F ++G+ A NN++RG+Y G EIV VL IR+ A+ L+GF + HSL
Sbjct: 85 FDPENAVSGESGAGNNWSRGYYEQGAEIVDKVLSVIRREAEAADSLEGFQLIHSL 139
>Z22179-11|CAA80164.1| 444|Caenorhabditis elegans Hypothetical
protein F58A4.8 protein.
Length = 444
Score = 45.6 bits (103), Expect = 6e-05
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 162 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGKHVPR 341
++VHVGQ G Q+ A W+ EHGI GQ + + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFYQADD---DHYVPR 64
Query: 342 AVFVDLEPTVVD-EVRTGTYRQLFH 413
AV VDLEP V++ +++ + LF+
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFN 89
Score = 33.1 bits (72), Expect = 0.32
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +1
Query: 445 AANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWRYRLLGSRSXLMERL 624
A NN+A G Y G+E+ ++D I + A+ L G L HS+ G+ S L+ERL
Sbjct: 102 AGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTG-SGTGSLLLERL 159
>AF287259-1|AAG24513.1| 444|Caenorhabditis elegans gamma-tubulin
protein.
Length = 444
Score = 45.6 bits (103), Expect = 6e-05
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 1/85 (1%)
Frame = +3
Query: 162 ISVHVGQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIXXXXXXXXXXXXXXXAGKHVPR 341
++VHVGQ G Q+ A W+ EHGI GQ + + +VPR
Sbjct: 8 MTVHVGQCGNQLAQAFWKSMVDEHGINERGQTTHEDDMNDKKDLLFYQADD---DHYVPR 64
Query: 342 AVFVDLEPTVVD-EVRTGTYRQLFH 413
AV VDLEP V++ +++ + LF+
Sbjct: 65 AVLVDLEPRVINGMMQSPNFSNLFN 89
Score = 33.1 bits (72), Expect = 0.32
Identities = 22/60 (36%), Positives = 32/60 (53%)
Frame = +1
Query: 445 AANNYARGHYTIGKEIVXLVLDRIRKLADXCTGLQGFLIFHSLRWRYRLLGSRSXLMERL 624
A NN+A G Y G+E+ ++D I + A+ L G L HS+ G+ S L+ERL
Sbjct: 102 AGNNWASG-YCQGQEVQEKIMDIIIREAENTNNLDGILFTHSVSGGTG-SGTGSLLLERL 159
>AL161712-9|CAC70134.1| 343|Caenorhabditis elegans Hypothetical
protein Y66D12A.12 protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.74
Identities = 19/52 (36%), Positives = 30/52 (57%)
Frame = +1
Query: 178 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILFSLSSARPELAST 333
A P MP+ S + S++SS M + P+ PS ++T+L S+ + E AST
Sbjct: 189 ATPALLPFMPSSSTFSASSSSSEMEQTPE--PSSLDTVLTSMMNNNEEAAST 238
>U97015-4|AAB52342.1| 245|Caenorhabditis elegans Hypothetical
protein F48C1.6 protein.
Length = 245
Score = 30.7 bits (66), Expect = 1.7
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 588 PVPPPKGVEDQESLQTGTXVSELADSVQNQXYDF 487
P+P P GVED +GT +DS Q Q Y F
Sbjct: 212 PIPSPYGVED-SGFMSGTPSGPSSDSNQGQGYTF 244
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,012,439
Number of Sequences: 27780
Number of extensions: 359540
Number of successful extensions: 880
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 756
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 859
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2636483976
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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