Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_N02
(839 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1A6.09c |lag1||sphingosine N-acyltransferase Lag1|Schizosacc... 37 0.004
SPBP19A11.04c |mor2|cps12|morphogenesis protein Mor2|Schizosacch... 29 1.1
SPAC4H3.11c |ppc89|mug127|spindle pole body protein Ppc89|Schizo... 27 2.5
SPAC1B3.10c |||SEL1 repeat protein, unknown biological role|Schi... 27 2.5
SPAC1486.06 |||nicotinate phosphoribosyltransferase |Schizosacch... 27 2.5
SPAC29B12.14c |||purine transporter |Schizosaccharomyces pombe|c... 27 4.4
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 26 5.8
SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolo... 26 5.8
SPAC32A11.03c |phx1||homeobox transcription factor Phx1|Schizosa... 26 5.8
SPCC584.16c |||sequence orphan|Schizosaccharomyces pombe|chr 3||... 26 7.6
>SPAC1A6.09c |lag1||sphingosine N-acyltransferase
Lag1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 390
Score = 36.7 bits (81), Expect = 0.004
Identities = 16/78 (20%), Positives = 36/78 (46%)
Frame = +1
Query: 490 LTKFCENTWKFTFYLINFTFGIFVLWDKEWLWDIDQCYIGYPHQGVTSDVWWYYMISSAF 669
+ +FCE + F +YL + G+++ + + ++ + YP ++ YY+I F
Sbjct: 152 IIRFCEQGYSFFYYLCFWFLGLYIYRSSNYWSNEEKLFEDYPQYYMSPLFKAYYLIQLGF 211
Query: 670 YWSLTISXFWDVKRKDFW 723
+ + + +R D W
Sbjct: 212 WLQQILVLHLEQRRADHW 229
>SPBP19A11.04c |mor2|cps12|morphogenesis protein
Mor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2196
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)
Frame = +1
Query: 166 TWEDIAPGPDKAVEYTNYTHVFIPIPLAVVFMVIRNFLEKHWYAPFGKS-LGIKDTRPR 339
T E I P K T Y +VF P ++ + + F KHW + + +KD R R
Sbjct: 303 TIETIYPVVLKMCTKTKYWNVFFPFCCTLLCLSPKQFFLKHWISSLDAAFFRVKDRRLR 361
>SPAC4H3.11c |ppc89|mug127|spindle pole body protein
Ppc89|Schizosaccharomyces pombe|chr 1|||Manual
Length = 783
Score = 27.5 bits (58), Expect = 2.5
Identities = 22/54 (40%), Positives = 26/54 (48%)
Frame = +3
Query: 417 EAGFDGTASGTLVASASQPGETLDPDQVLREHVEIHVLPHQLHIRNIRSVGQGV 578
EAGFD GT + S+ G T PD+ E + HVL HI N S GV
Sbjct: 620 EAGFDWN-QGTF-HNGSEFGTTGVPDEPNEEELPKHVLKQVEHIIN-ESAAHGV 670
>SPAC1B3.10c |||SEL1 repeat protein, unknown biological
role|Schizosaccharomyces pombe|chr 1|||Manual
Length = 680
Score = 27.5 bits (58), Expect = 2.5
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +1
Query: 550 GIFVLWDKEWLWDIDQCYIGYPHQGVTSDVWWYYMISSAFYWSLT 684
G+ L+DK L+DID+ Y + +D YY + Y LT
Sbjct: 344 GLLHLFDKGPLFDIDKAYWWFKRGATKNDSNSYYGLGYMAYHGLT 388
>SPAC1486.06 |||nicotinate phosphoribosyltransferase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 410
Score = 27.5 bits (58), Expect = 2.5
Identities = 10/16 (62%), Positives = 12/16 (75%)
Frame = +2
Query: 563 CGTRSGYGISTNATSD 610
CG +S +GI TN TSD
Sbjct: 338 CGIKSAFGIGTNLTSD 353
>SPAC29B12.14c |||purine transporter |Schizosaccharomyces pombe|chr
1|||Manual
Length = 581
Score = 26.6 bits (56), Expect = 4.4
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -2
Query: 439 AVPSNPASWLLWRTVWVSDIVGMLPPTLDYLALSV--VSYPLCLRTSRKVRTSVSP 278
AV S + W W TVWV + T+ A +V +S+P+ R+S + S+ P
Sbjct: 79 AVESGLSWWEAWITVWVGYTIAAFILTIAGRAGAVYHISFPVLSRSSFGIWGSLWP 134
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 438 PFRQIQLLGYCGELFGFRTLSVC 370
PF +I+LL E+F +TLS C
Sbjct: 310 PFSEIRLLSPASEVFNAKTLSWC 332
>SPAC17A5.16 |||human down-regulated in multiple cancers-1 homolog
3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 925
Score = 26.2 bits (55), Expect = 5.8
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 415 KKLDLTERQVERWWRLRRSQEKP 483
+KLDL E + WW LR+ + P
Sbjct: 110 EKLDLEEWHQKFWWSLRKKRNLP 132
>SPAC32A11.03c |phx1||homeobox transcription factor
Phx1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 942
Score = 26.2 bits (55), Expect = 5.8
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +1
Query: 385 PKPKQFSTIAKKLDLTERQVERWWRLRRSQEK 480
P P I ++L++ ER V W++ RR++ K
Sbjct: 191 PPPAIREKIGRELNIPERSVTIWFQNRRAKSK 222
>SPCC584.16c |||sequence orphan|Schizosaccharomyces pombe|chr
3|||Manual
Length = 231
Score = 25.8 bits (54), Expect = 7.6
Identities = 14/47 (29%), Positives = 20/47 (42%)
Frame = +3
Query: 423 GFDGTASGTLVASASQPGETLDPDQVLREHVEIHVLPHQLHIRNIRS 563
GF +LV + G T +P L +H L H L + N+ S
Sbjct: 44 GFLRPKLNSLVVQVKRQGITAEPVFNLYSRFSVHTLSHNLVLDNVSS 90
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,417,458
Number of Sequences: 5004
Number of extensions: 76115
Number of successful extensions: 231
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 231
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 414453330
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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