Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_N02
(839 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42438-8|AAF99867.2| 368|Caenorhabditis elegans Homolog of yeas... 98 8e-21
AF105010-1|AAD16893.1| 368|Caenorhabditis elegans LAG1Ce-1 prot... 98 8e-21
U40415-6|AAP68933.1| 329|Caenorhabditis elegans Homolog of yeas... 63 3e-10
Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical pr... 31 1.0
X52811-1|CAB57217.1| 60|Caenorhabditis elegans protein ( Caeno... 31 1.0
U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective phary... 31 1.0
M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein ( C.ele... 31 1.0
L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal p... 31 1.0
AY766389-1|AAV34757.1| 170|Caenorhabditis elegans PHA-2 protein. 31 1.0
AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein. 31 1.0
AC024847-9|AAR30201.1| 147|Caenorhabditis elegans C.elegans hom... 31 1.0
AL033514-1|CAA22081.2| 275|Caenorhabditis elegans Hypothetical ... 30 1.8
AF172092-1|AAD48876.1| 275|Caenorhabditis elegans homeodomain p... 30 1.8
U70857-9|AAB09174.1| 261|Caenorhabditis elegans C.elegans homeo... 30 2.4
U49944-3|AAM51525.1| 341|Caenorhabditis elegans Mesodermal line... 30 2.4
L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleo... 30 2.4
AL033514-3|CAC70124.1| 218|Caenorhabditis elegans Hypothetical ... 30 2.4
AF172090-1|AAD48874.1| 218|Caenorhabditis elegans homeodomain p... 30 2.4
AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc fi... 30 2.4
Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical p... 29 4.1
Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical p... 29 4.1
Z32680-4|CAA83601.1| 273|Caenorhabditis elegans Hypothetical pr... 29 4.1
Z11795-1|CAA77838.1| 130|Caenorhabditis elegans pceh16-1 protei... 29 4.1
U40933-7|AAA81676.4| 122|Caenorhabditis elegans C.elegans homeo... 29 4.1
AJ312288-1|CAC41972.1| 278|Caenorhabditis elegans putative tran... 29 4.1
AF039720-10|AAB96702.2| 282|Caenorhabditis elegans Hypothetical... 29 4.1
AF039720-9|AAK68360.2| 676|Caenorhabditis elegans Hypothetical ... 29 4.1
U40933-6|AAQ23123.1| 199|Caenorhabditis elegans C.elegans homeo... 29 5.4
AY246429-1|AAO91836.1| 209|Caenorhabditis elegans homeodomain p... 29 5.4
AY246428-1|AAO91835.1| 209|Caenorhabditis elegans homeodomain p... 29 5.4
AF003137-4|AAB93639.2| 209|Caenorhabditis elegans C.elegans hom... 29 5.4
Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical pr... 28 7.2
Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical pr... 28 7.2
X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein ... 28 7.2
Z93380-3|CAB07600.1| 339|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z92829-8|CAB07348.1| 305|Caenorhabditis elegans Hypothetical pr... 28 9.5
Z46241-10|CAH19082.1| 268|Caenorhabditis elegans Hypothetical p... 28 9.5
Z46241-9|CAA86322.2| 270|Caenorhabditis elegans Hypothetical pr... 28 9.5
X62782-1|CAA44619.1| 208|Caenorhabditis elegans pal-1 protein. 28 9.5
X57140-1|CAA40419.1| 71|Caenorhabditis elegans ceh-3 protein. 28 9.5
L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protei... 28 9.5
L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protei... 28 9.5
AF045642-11|AAC02584.1| 443|Caenorhabditis elegans Hypothetical... 28 9.5
AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell... 28 9.5
>U42438-8|AAF99867.2| 368|Caenorhabditis elegans Homolog of yeast
longevity geneprotein 1 protein.
Length = 368
Score = 97.9 bits (233), Expect = 8e-21
Identities = 37/91 (40%), Positives = 54/91 (59%)
Frame = +1
Query: 451 WWRLRRSQEKPSTLTKFCENTWKFTFYLINFTFGIFVLWDKEWLWDIDQCYIGYPHQGVT 630
W + S K E W+F++Y F +G++V+ + WL+D+ QC+IGYP V
Sbjct: 76 WEHMTGGFASVSRAKKILECFWRFSYYTFAFLYGLYVMKNSSWLYDVKQCWIGYPFHPVP 135
Query: 631 SDVWWYYMISSAFYWSLTISXFWDVKRKDFW 723
+WWYYMI + FY+SL I +DV+R DFW
Sbjct: 136 DTIWWYYMIETGFYYSLLIGSTFDVRRSDFW 166
>AF105010-1|AAD16893.1| 368|Caenorhabditis elegans LAG1Ce-1
protein.
Length = 368
Score = 97.9 bits (233), Expect = 8e-21
Identities = 37/91 (40%), Positives = 54/91 (59%)
Frame = +1
Query: 451 WWRLRRSQEKPSTLTKFCENTWKFTFYLINFTFGIFVLWDKEWLWDIDQCYIGYPHQGVT 630
W + S K E W+F++Y F +G++V+ + WL+D+ QC+IGYP V
Sbjct: 76 WEHMTGGFASVSRAKKILECFWRFSYYTFAFLYGLYVMKNSSWLYDVKQCWIGYPFHPVP 135
Query: 631 SDVWWYYMISSAFYWSLTISXFWDVKRKDFW 723
+WWYYMI + FY+SL I +DV+R DFW
Sbjct: 136 DTIWWYYMIETGFYYSLLIGSTFDVRRSDFW 166
>U40415-6|AAP68933.1| 329|Caenorhabditis elegans Homolog of yeast
longevity geneprotein 2 protein.
Length = 329
Score = 62.9 bits (146), Expect = 3e-10
Identities = 30/107 (28%), Positives = 53/107 (49%), Gaps = 1/107 (0%)
Frame = +1
Query: 463 RRSQEKPSTLTKFCENTWKFTFYLINFTFGIFVLWDKEWLWDIDQCYIGYPHQGVTSDVW 642
R + ++ ++ E + +Y I+F G++++ + L+DI +C+ +P + + V
Sbjct: 76 RGTLDREKKYSRMAECAMRALYYTISFVCGLYLVLHESHLYDITECWRNWPFHPIPNAVA 135
Query: 643 WYYMISSAFYWSLTIS-XFWDVKRKDFWXXVRPPXXHHXAALLXLGM 780
WYY I FY +L F D KR DFW + HH L +G+
Sbjct: 136 WYYWIQGGFYIALVFGILFLDAKRSDFWQML----VHHFITLALIGV 178
>Z29095-2|CAD18875.1| 2056|Caenorhabditis elegans Hypothetical
protein R10E11.1b protein.
Length = 2056
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +1
Query: 319 IKDTRPRKAPNNPKLEEAYRQCPKPKQFSTIAKKLDLTERQVERWWRLRRSQE 477
+KDT+ A + PK ++A R+ P T+ + DL + + W +L +S++
Sbjct: 833 VKDTKDGVAESKPKEQQAKREPTPPPTEDTVFSQEDLIKFLLPVWEKLDKSED 885
>Z29095-1|CAA82353.2| 2045|Caenorhabditis elegans Hypothetical
protein R10E11.1a protein.
Length = 2045
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/53 (28%), Positives = 29/53 (54%)
Frame = +1
Query: 319 IKDTRPRKAPNNPKLEEAYRQCPKPKQFSTIAKKLDLTERQVERWWRLRRSQE 477
+KDT+ A + PK ++A R+ P T+ + DL + + W +L +S++
Sbjct: 822 VKDTKDGVAESKPKEQQAKREPTPPPTEDTVFSQEDLIKFLLPVWEKLDKSED 874
>X52811-1|CAB57217.1| 60|Caenorhabditis elegans protein (
Caenorhabditis elegansceh-9 gene, unknown homeobox. ).
Length = 60
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 403 STIAKKLDLTERQVERWWRLRRSQEK 480
S +AK+LD+TE QV+ W++ RR++ K
Sbjct: 32 SELAKRLDVTETQVKIWFQNRRTKWK 57
>U56860-2|AAA98706.3| 225|Caenorhabditis elegans Defective pharynx
development protein2 protein.
Length = 225
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +1
Query: 391 PKQFSTIAKKLDLTERQVERWWRLRRSQ 474
P++ +AK L L+ERQV+ W++ RR++
Sbjct: 162 PQERKKLAKSLSLSERQVKTWFQNRRAK 189
>M22751-1|AAA28106.1| 211|Caenorhabditis elegans protein (
C.elegans DNA-bindingprotein (mab5) mRNA, 3' end. ).
Length = 211
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 304 GKSLGIKDTRPRKAPNNPKLEEAYRQCPKPKQFSTIAKKLDLTERQVERWWRLRRSQEK 480
G+S + T R + E Y + K+ I++ L LTERQV+ W++ RR + K
Sbjct: 126 GESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHK 184
>L15201-2|AAA27945.2| 200|Caenorhabditis elegans Male abnormal
protein 5 protein.
Length = 200
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 304 GKSLGIKDTRPRKAPNNPKLEEAYRQCPKPKQFSTIAKKLDLTERQVERWWRLRRSQEK 480
G+S + T R + E Y + K+ I++ L LTERQV+ W++ RR + K
Sbjct: 115 GESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHK 173
>AY766389-1|AAV34757.1| 170|Caenorhabditis elegans PHA-2 protein.
Length = 170
Score = 31.1 bits (67), Expect = 1.0
Identities = 12/28 (42%), Positives = 21/28 (75%)
Frame = +1
Query: 391 PKQFSTIAKKLDLTERQVERWWRLRRSQ 474
P++ +AK L L+ERQV+ W++ RR++
Sbjct: 107 PQERKKLAKSLSLSERQVKTWFQNRRAK 134
>AF277990-1|AAG00458.1| 200|Caenorhabditis elegans MAB-5 protein.
Length = 200
Score = 31.1 bits (67), Expect = 1.0
Identities = 19/59 (32%), Positives = 30/59 (50%)
Frame = +1
Query: 304 GKSLGIKDTRPRKAPNNPKLEEAYRQCPKPKQFSTIAKKLDLTERQVERWWRLRRSQEK 480
G+S + T R + E Y + K+ I++ L LTERQV+ W++ RR + K
Sbjct: 115 GESKRTRQTYSRSQTLELEKEFHYHKYLTRKRRQEISETLHLTERQVKIWFQNRRMKHK 173
>AC024847-9|AAR30201.1| 147|Caenorhabditis elegans C.elegans
homeobox protein 9 protein.
Length = 147
Score = 31.1 bits (67), Expect = 1.0
Identities = 13/26 (50%), Positives = 21/26 (80%)
Frame = +1
Query: 403 STIAKKLDLTERQVERWWRLRRSQEK 480
S +AK+LD+TE QV+ W++ RR++ K
Sbjct: 101 SELAKRLDVTETQVKIWFQNRRTKWK 126
>AL033514-1|CAA22081.2| 275|Caenorhabditis elegans Hypothetical
protein Y75B8A.1 protein.
Length = 275
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 409 IAKKLDLTERQVERWWRLRRSQEK 480
+AK L LTERQV+ W++ RR ++K
Sbjct: 232 LAKYLHLTERQVKIWFQNRRMKDK 255
>AF172092-1|AAD48876.1| 275|Caenorhabditis elegans homeodomain
protein PHP-3 protein.
Length = 275
Score = 30.3 bits (65), Expect = 1.8
Identities = 13/24 (54%), Positives = 19/24 (79%)
Frame = +1
Query: 409 IAKKLDLTERQVERWWRLRRSQEK 480
+AK L LTERQV+ W++ RR ++K
Sbjct: 232 LAKYLHLTERQVKIWFQNRRMKDK 255
>U70857-9|AAB09174.1| 261|Caenorhabditis elegans C.elegans homeobox
protein 33 protein.
Length = 261
Score = 29.9 bits (64), Expect = 2.4
Identities = 11/32 (34%), Positives = 20/32 (62%)
Frame = +1
Query: 385 PKPKQFSTIAKKLDLTERQVERWWRLRRSQEK 480
P P++ +A+K LT QV W++ RR +++
Sbjct: 158 PSPREKRELAEKTHLTVTQVSNWFKNRRQRDR 189
>U49944-3|AAM51525.1| 341|Caenorhabditis elegans Mesodermal lineage
specificationprotein 2 protein.
Length = 341
Score = 29.9 bits (64), Expect = 2.4
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 403 STIAKKLDLTERQVERWWRLRRSQEKPSTLT 495
S +A+KL LTE QV+ W++ RR++ K T
Sbjct: 232 SNLAQKLHLTETQVKIWFQNRRNKFKRQAQT 262
>L14324-3|AAA28185.1| 851|Caenorhabditis elegans Abnormal nucleoli
protein 1 protein.
Length = 851
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -1
Query: 206 STALSGPGAISSHVV--LGGNQTPSSQNLSNISRSILIVSKQALLFIQVC 63
+++ S + SSH V LGG Q+P S L + RS+L + +A + C
Sbjct: 186 TSSSSSASSTSSHQVPSLGGKQSPDSMMLGSGKRSVLCLQHRASELVFFC 235
>AL033514-3|CAC70124.1| 218|Caenorhabditis elegans Hypothetical
protein Y75B8A.2b protein.
Length = 218
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 316 GIKDTRPRKAPNNPKLEEAY--RQCPKPKQFSTIAKKLDLTERQVERWWRLRRSQEK 480
G K +P K +LE Y Q K+ S ++ +L L E+QV+ W++ RR ++K
Sbjct: 137 GKKKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQLMLDEKQVKVWFQNRRMKDK 193
>AF172090-1|AAD48874.1| 218|Caenorhabditis elegans homeodomain
protein NOB-1A protein.
Length = 218
Score = 29.9 bits (64), Expect = 2.4
Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Frame = +1
Query: 316 GIKDTRPRKAPNNPKLEEAY--RQCPKPKQFSTIAKKLDLTERQVERWWRLRRSQEK 480
G K +P K +LE Y Q K+ S ++ +L L E+QV+ W++ RR ++K
Sbjct: 137 GKKKRQPYKKDQISRLEYEYSVNQYLTNKRRSELSAQLMLDEKQVKVWFQNRRMKDK 193
>AF047027-1|AAC14263.1| 851|Caenorhabditis elegans B box zinc
finger protein Ncl-1 protein.
Length = 851
Score = 29.9 bits (64), Expect = 2.4
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 2/50 (4%)
Frame = -1
Query: 206 STALSGPGAISSHVV--LGGNQTPSSQNLSNISRSILIVSKQALLFIQVC 63
+++ S + SSH V LGG Q+P S L + RS+L + +A + C
Sbjct: 186 TSSSSSASSTSSHQVPSLGGKQSPDSMMLGSGKRSVLCLQHRASELVFFC 235
>Z83241-5|CAH10791.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 268 RNFLEKHWYAPFGKSLGIKDTRPRKAPNNPKLEEAYRQCPKPKQFSTIAKKLDLTERQVE 447
R+F+ P GK +KD + + EE + P PK + KKL E Q++
Sbjct: 340 RSFMSAKLQVPQGKKRTLKDIAKKAVSGVKEREEEAKARPVPKSL-IVEKKLQEIENQLQ 398
Query: 448 R 450
+
Sbjct: 399 K 399
>Z83241-4|CAB05819.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 268 RNFLEKHWYAPFGKSLGIKDTRPRKAPNNPKLEEAYRQCPKPKQFSTIAKKLDLTERQVE 447
R+F+ P GK +KD + + EE + P PK + KKL E Q++
Sbjct: 338 RSFMSAKLQVPQGKKRTLKDIAKKAVSGVKEREEEAKARPVPKSL-IVEKKLQEIENQLQ 396
Query: 448 R 450
+
Sbjct: 397 K 397
>Z81120-11|CAH10815.1| 1183|Caenorhabditis elegans Hypothetical
protein T12D8.9b protein.
Length = 1183
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 268 RNFLEKHWYAPFGKSLGIKDTRPRKAPNNPKLEEAYRQCPKPKQFSTIAKKLDLTERQVE 447
R+F+ P GK +KD + + EE + P PK + KKL E Q++
Sbjct: 340 RSFMSAKLQVPQGKKRTLKDIAKKAVSGVKEREEEAKARPVPKSL-IVEKKLQEIENQLQ 398
Query: 448 R 450
+
Sbjct: 399 K 399
>Z81120-10|CAB03350.3| 1181|Caenorhabditis elegans Hypothetical
protein T12D8.9a protein.
Length = 1181
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/61 (27%), Positives = 27/61 (44%)
Frame = +1
Query: 268 RNFLEKHWYAPFGKSLGIKDTRPRKAPNNPKLEEAYRQCPKPKQFSTIAKKLDLTERQVE 447
R+F+ P GK +KD + + EE + P PK + KKL E Q++
Sbjct: 338 RSFMSAKLQVPQGKKRTLKDIAKKAVSGVKEREEEAKARPVPKSL-IVEKKLQEIENQLQ 396
Query: 448 R 450
+
Sbjct: 397 K 397
>Z32680-4|CAA83601.1| 273|Caenorhabditis elegans Hypothetical
protein C28A5.4 protein.
Length = 273
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Frame = +1
Query: 316 GIKDTRPRKAPNNPKLEEAYRQCPKPKQFS-----TIAKKLDLTERQVERWWRLRRSQEK 480
G K +PR N+ +L+ ++ K + + +A +L L++ QV+ W++ RRS++K
Sbjct: 99 GKKMRKPRTIYNSSQLQMLQKKFQKTQYLALPDRAALAHELGLSQTQVKIWFQNRRSKQK 158
>Z11795-1|CAA77838.1| 130|Caenorhabditis elegans pceh16-1 protein
protein.
Length = 130
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +1
Query: 274 FLEKHWYAPFGKSLGIKDTRPRKAPNNPKLEEAYRQCPKPKQFST-----IAKKLDLTER 438
+ KH Y KS + + +PR+A + +L+ + K S +++ L+LTE
Sbjct: 10 YSRKHDYKRSRKS--VCERKPRQAYSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTET 67
Query: 439 QVERWWRLRRSQEK 480
Q++ W++ RR++ K
Sbjct: 68 QIKTWFQNRRTKWK 81
>U40933-7|AAA81676.4| 122|Caenorhabditis elegans C.elegans homeobox
protein 19,isoform a protein.
Length = 122
Score = 29.1 bits (62), Expect = 4.1
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Frame = +1
Query: 274 FLEKHWYAPFGKSLGIKDTRPRKAPNNPKLEEAYRQCPKPKQFST-----IAKKLDLTER 438
+ KH Y KS + + +PR+A + +L+ + K S +++ L+LTE
Sbjct: 2 YSRKHDYKRSRKS--VCERKPRQAYSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTET 59
Query: 439 QVERWWRLRRSQEK 480
Q++ W++ RR++ K
Sbjct: 60 QIKTWFQNRRTKWK 73
>AJ312288-1|CAC41972.1| 278|Caenorhabditis elegans putative
transcription factor protein.
Length = 278
Score = 29.1 bits (62), Expect = 4.1
Identities = 17/60 (28%), Positives = 34/60 (56%), Gaps = 5/60 (8%)
Frame = +1
Query: 316 GIKDTRPRKAPNNPKLEEAYRQCPKPKQFS-----TIAKKLDLTERQVERWWRLRRSQEK 480
G K +PR N+ +L+ ++ K + + +A +L L++ QV+ W++ RRS++K
Sbjct: 104 GKKMRKPRTIYNSSQLQMLQKKFQKTQYLALPDRAALAHELGLSQTQVKIWFQNRRSKQK 163
>AF039720-10|AAB96702.2| 282|Caenorhabditis elegans Hypothetical
protein F33D11.9a protein.
Length = 282
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -3
Query: 453 PAFHLPFRQIQLLGYCGELFGFRTLSVCFLQLWIIWRF 340
P HL F + Y + F+T+ F+ W+ W F
Sbjct: 30 PVVHLAFHVLGFFYYIATTYVFQTIGTTFVLQWMQWPF 67
>AF039720-9|AAK68360.2| 676|Caenorhabditis elegans Hypothetical
protein F33D11.9b protein.
Length = 676
Score = 29.1 bits (62), Expect = 4.1
Identities = 11/38 (28%), Positives = 17/38 (44%)
Frame = -3
Query: 453 PAFHLPFRQIQLLGYCGELFGFRTLSVCFLQLWIIWRF 340
P HL F + Y + F+T+ F+ W+ W F
Sbjct: 424 PVVHLAFHVLGFFYYIATTYVFQTIGTTFVLQWMQWPF 461
>U40933-6|AAQ23123.1| 199|Caenorhabditis elegans C.elegans homeobox
protein 19,isoform b protein.
Length = 199
Score = 28.7 bits (61), Expect = 5.4
Identities = 20/71 (28%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Frame = +1
Query: 283 KHWYAPFGKSLGIKDTRPRKAPNNPKLEEAYRQCPKPKQFST-----IAKKLDLTERQVE 447
KH Y KS + + +PR+A + +L+ + K S +++ L+LTE Q++
Sbjct: 82 KHDYKRSRKS--VCERKPRQAYSARQLDRLETEFQTDKYLSVNKRIQLSQTLNLTETQIK 139
Query: 448 RWWRLRRSQEK 480
W++ RR++ K
Sbjct: 140 TWFQNRRTKWK 150
>AY246429-1|AAO91836.1| 209|Caenorhabditis elegans homeodomain
protein CEH-2 protein.
Length = 209
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 409 IAKKLDLTERQVERWWRLRRSQEK 480
+A KL LTE QV+ W++ RR++ K
Sbjct: 159 LAAKLSLTETQVKVWFQNRRTKHK 182
>AY246428-1|AAO91835.1| 209|Caenorhabditis elegans homeodomain
protein CEH-2 protein.
Length = 209
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 409 IAKKLDLTERQVERWWRLRRSQEK 480
+A KL LTE QV+ W++ RR++ K
Sbjct: 159 LAAKLSLTETQVKVWFQNRRTKHK 182
>AF003137-4|AAB93639.2| 209|Caenorhabditis elegans C.elegans
homeobox protein 2 protein.
Length = 209
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/24 (50%), Positives = 18/24 (75%)
Frame = +1
Query: 409 IAKKLDLTERQVERWWRLRRSQEK 480
+A KL LTE QV+ W++ RR++ K
Sbjct: 159 LAAKLSLTETQVKVWFQNRRTKHK 182
>Z81594-1|CAB04745.1| 908|Caenorhabditis elegans Hypothetical
protein T20F10.1 protein.
Length = 908
Score = 28.3 bits (60), Expect = 7.2
Identities = 12/22 (54%), Positives = 16/22 (72%)
Frame = -1
Query: 185 GAISSHVVLGGNQTPSSQNLSN 120
G +SSHV LG TPSS ++S+
Sbjct: 67 GLLSSHVALGSLATPSSSSVSH 88
>Z80221-2|CAB02310.1| 405|Caenorhabditis elegans Hypothetical
protein ZC247.3 protein.
Length = 405
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 340 KAPNNPKLEEAYRQCPKPKQF--STIAKKLDLTERQVERWWRLRRSQEKPSTLTKF 501
KA L+ A+ PKP + +A + L R ++ W++ RRS+E+ +F
Sbjct: 249 KAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERRMKQLRF 304
>X54355-1|CAA38240.1| 382|Caenorhabditis elegans lin-11 protein
protein.
Length = 382
Score = 28.3 bits (60), Expect = 7.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +1
Query: 340 KAPNNPKLEEAYRQCPKPKQF--STIAKKLDLTERQVERWWRLRRSQEKPSTLTKF 501
KA L+ A+ PKP + +A + L R ++ W++ RRS+E+ +F
Sbjct: 226 KAKQLETLKNAFAATPKPTRHIREQLAAETGLNMRVIQVWFQNRRSKERRMKQLRF 281
>Z93380-3|CAB07600.1| 339|Caenorhabditis elegans Hypothetical
protein F28C12.4 protein.
Length = 339
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/37 (35%), Positives = 23/37 (62%), Gaps = 3/37 (8%)
Frame = +1
Query: 520 FTFYLINF--TFGIFVL-WDKEWLWDIDQCYIGYPHQ 621
+ +YL N+ T+ +F L +D+ + +CYI YP+Q
Sbjct: 114 YFYYLTNYFSTYSVFSLTFDRLISYFFPKCYISYPYQ 150
>Z92829-8|CAB07348.1| 305|Caenorhabditis elegans Hypothetical
protein F10A3.12 protein.
Length = 305
Score = 27.9 bits (59), Expect = 9.5
Identities = 17/62 (27%), Positives = 27/62 (43%)
Frame = +1
Query: 511 TWKFTFYLINFTFGIFVLWDKEWLWDIDQCYIGYPHQGVTSDVWWYYMISSAFYWSLTIS 690
TW F FY +N G + D+E + + + Y P++ + +YY S W I
Sbjct: 133 TWFFCFYYLN---GPSEMKDEELIPEFMEAYCLQPNEYTYTGPHYYYTDHSTGEWKFHIP 189
Query: 691 XF 696
F
Sbjct: 190 SF 191
>Z46241-10|CAH19082.1| 268|Caenorhabditis elegans Hypothetical
protein C38D4.6b protein.
Length = 268
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +1
Query: 403 STIAKKLDLTERQVERWWRLRRSQEK 480
S ++ L LTERQ++ W++ RR++++
Sbjct: 235 SQLSTMLSLTERQIKIWFQNRRAKDR 260
>Z46241-9|CAA86322.2| 270|Caenorhabditis elegans Hypothetical
protein C38D4.6a protein.
Length = 270
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +1
Query: 403 STIAKKLDLTERQVERWWRLRRSQEK 480
S ++ L LTERQ++ W++ RR++++
Sbjct: 237 SQLSTMLSLTERQIKIWFQNRRAKDR 262
>X62782-1|CAA44619.1| 208|Caenorhabditis elegans pal-1 protein.
Length = 208
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +1
Query: 403 STIAKKLDLTERQVERWWRLRRSQEK 480
S ++ L LTERQ++ W++ RR++++
Sbjct: 175 SQLSTMLSLTERQIKIWFQNRRAKDR 200
>X57140-1|CAA40419.1| 71|Caenorhabditis elegans ceh-3 protein.
Length = 71
Score = 27.9 bits (59), Expect = 9.5
Identities = 10/26 (38%), Positives = 20/26 (76%)
Frame = +1
Query: 403 STIAKKLDLTERQVERWWRLRRSQEK 480
S ++ L LTERQ++ W++ RR++++
Sbjct: 40 SQLSTMLSLTERQIKIWFQNRRAKDR 65
>L19639-1|AAC37168.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 409 IAKKLDLTERQVERWWRLRRSQEKPSTLTK 498
+A L LTERQV+ W++ RR + K K
Sbjct: 198 VAHSLMLTERQVKIWFQNRRMKHKKENKDK 227
>L19248-1|AAB04137.1| 253|Caenorhabditis elegans homeobox protein
protein.
Length = 253
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 409 IAKKLDLTERQVERWWRLRRSQEKPSTLTK 498
+A L LTERQV+ W++ RR + K K
Sbjct: 198 VAHSLMLTERQVKIWFQNRRMKHKKENKDK 227
>AF045642-11|AAC02584.1| 443|Caenorhabditis elegans Hypothetical
protein C17H12.5 protein.
Length = 443
Score = 27.9 bits (59), Expect = 9.5
Identities = 16/51 (31%), Positives = 24/51 (47%), Gaps = 3/51 (5%)
Frame = +1
Query: 178 IAPGPDKAVEYTNYTHVFIP---IPLAVVFMVIRNFLEKHWYAPFGKSLGI 321
I P + Y N + V +P P+ + M R F E+ W A F +S+ I
Sbjct: 196 IVKNPAQPDSYVNMSSVIVPHCRYPILMAQMPKRGFEEEFWRAAFNESVVI 246
>AC006605-9|AAK85445.1| 253|Caenorhabditis elegans Abnormal cell
lineage protein 39 protein.
Length = 253
Score = 27.9 bits (59), Expect = 9.5
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +1
Query: 409 IAKKLDLTERQVERWWRLRRSQEKPSTLTK 498
+A L LTERQV+ W++ RR + K K
Sbjct: 198 VAHSLMLTERQVKIWFQNRRMKHKKENKDK 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,166,646
Number of Sequences: 27780
Number of extensions: 438634
Number of successful extensions: 1443
Number of sequences better than 10.0: 47
Number of HSP's better than 10.0 without gapping: 1357
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1443
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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