Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_N01
         (847 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY094842-1|AAM11195.1|  883|Drosophila melanogaster RE01745p pro...    29   8.0  
AE014296-1380|AAF50480.2|  883|Drosophila melanogaster CG13676-P...    29   8.0  

>AY094842-1|AAM11195.1|  883|Drosophila melanogaster RE01745p
           protein.
          Length = 883

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 17/61 (27%), Positives = 25/61 (40%)
 Frame = +1

Query: 346 SSRNIPPNSPFPYTERRRLSQCRXXXXXXXKRENDPPAPILFSEIELGKPHQSISDILAK 525
           + R I P  P    ERR  ++ R       ++E   P+  L    E  KP+ S   + A 
Sbjct: 328 AGRKISPRKPGRVEERRSFNEDRPLGRRRSEKERTTPSSALDDLDEYEKPYNSADQVEAA 387

Query: 526 E 528
           E
Sbjct: 388 E 388


>AE014296-1380|AAF50480.2|  883|Drosophila melanogaster CG13676-PA
           protein.
          Length = 883

 Score = 29.1 bits (62), Expect = 8.0
 Identities = 17/61 (27%), Positives = 25/61 (40%)
 Frame = +1

Query: 346 SSRNIPPNSPFPYTERRRLSQCRXXXXXXXKRENDPPAPILFSEIELGKPHQSISDILAK 525
           + R I P  P    ERR  ++ R       ++E   P+  L    E  KP+ S   + A 
Sbjct: 328 AGRKISPRKPGRVEERRSFNEDRPLGRRRSEKERTTPSSALDDLDEYEKPYNSADQVEAA 387

Query: 526 E 528
           E
Sbjct: 388 E 388


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,898,176
Number of Sequences: 53049
Number of extensions: 426718
Number of successful extensions: 733
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 719
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 733
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4044853644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)