Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_N01
         (847 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            23   4.7  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   6.2  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    22   6.2  
X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    22   8.2  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    22   8.2  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    22   8.2  
DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex det...    22   8.2  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    22   8.2  

>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 10/26 (38%), Positives = 12/26 (46%)
 Frame = -1

Query: 613 HPRCHTNHXVTYLXPRXCALLRCHHL 536
           HPRC  N+       R C L+  H L
Sbjct: 153 HPRCAVNNYNDPSNVRNCELVGLHDL 178


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 9/25 (36%), Positives = 12/25 (48%)
 Frame = +1

Query: 304 SFFQHYFMNHCNNLSSRNIPPNSPF 378
           SFFQ +F  +C     R   PN  +
Sbjct: 421 SFFQQFFHCYCPVRFGRKADPNGDY 445


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 12/38 (31%), Positives = 16/38 (42%)
 Frame = +3

Query: 360 TSKLTVPIY*ASTSISMPXXXXXXXQKGKRSACTYFIF 473
           TS LT+    A +  S+P            S CT F+F
Sbjct: 282 TSLLTLSTQHAKSQASLPPVSYLKAVDAFMSVCTVFVF 319


>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 183 VGELYRQRGLSQCYKLQH 236
           VG++Y     ++CYKL+H
Sbjct: 111 VGKMYFNLIDTKCYKLEH 128


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 183 VGELYRQRGLSQCYKLQH 236
           VG++Y     ++CYKL+H
Sbjct: 116 VGKMYFNLIDTKCYKLEH 133


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 9/23 (39%), Positives = 14/23 (60%), Gaps = 1/23 (4%)
 Frame = +1

Query: 328 NHCNNLSSRNIP-PNSPFPYTER 393
           NHCN  +SR I   N+  P+ ++
Sbjct: 63  NHCNRCTSRQIGIANTLIPFMQQ 85


>DQ325115-1|ABD14129.1|  185|Apis mellifera complementary sex
           determiner protein.
          Length = 185

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 10/29 (34%), Positives = 14/29 (48%)
 Frame = -1

Query: 370 SLEVYFYLKDYYNGS*NNVGRNYQSLVYH 284
           SL   +   + YN   NN   NY+ L Y+
Sbjct: 87  SLSNNYNYNNNYNNYNNNYNTNYKKLQYY 115


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 8/18 (44%), Positives = 13/18 (72%)
 Frame = +3

Query: 183 VGELYRQRGLSQCYKLQH 236
           VG++Y     ++CYKL+H
Sbjct: 116 VGKMYFNLIDTKCYKLEH 133


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 151,918
Number of Sequences: 438
Number of extensions: 2699
Number of successful extensions: 16
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)