Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_M22
         (854 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT023033-1|AAY55449.1|  186|Drosophila melanogaster IP04035p pro...    30   3.5  
AE013599-2059|AAF58136.1|  165|Drosophila melanogaster CG12959-P...    30   3.5  
BT025842-1|ABF85742.1|  818|Drosophila melanogaster IP12350p pro...    30   4.7  
BT024328-1|ABC86390.1|  593|Drosophila melanogaster IP10742p pro...    30   4.7  
BT022956-1|AAY55372.1|  148|Drosophila melanogaster IP04235p pro...    30   4.7  
AY061331-1|AAL28879.1|  403|Drosophila melanogaster LD25702p pro...    29   6.2  
AE014296-1025|AAF50735.1|  525|Drosophila melanogaster CG10489-P...    29   6.2  
AB102715-1|BAD10843.1|  403|Drosophila melanogaster DNA polymera...    29   6.2  

>BT023033-1|AAY55449.1|  186|Drosophila melanogaster IP04035p
           protein.
          Length = 186

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 21/84 (25%), Positives = 35/84 (41%)
 Frame = +3

Query: 81  VSNRLHTSVCLHAQYKNACQNGALTGQVSPSSQNTNITRHQSLWTFIRIRGTKSLQQ*VR 260
           ++  L  ++ LH  ++   +NGA +    P   N + + H   +T+ +I       Q +R
Sbjct: 41  LTGTLTNALRLHLPHR---RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILR 97

Query: 261 VRRSHGLRPSICSLTMSAVCCSKL 332
                GLR  IC L     C   L
Sbjct: 98  GHTRQGLRCRICKLNAHGDCAPNL 121


>AE013599-2059|AAF58136.1|  165|Drosophila melanogaster CG12959-PA
           protein.
          Length = 165

 Score = 30.3 bits (65), Expect = 3.5
 Identities = 21/84 (25%), Positives = 35/84 (41%)
 Frame = +3

Query: 81  VSNRLHTSVCLHAQYKNACQNGALTGQVSPSSQNTNITRHQSLWTFIRIRGTKSLQQ*VR 260
           ++  L  ++ LH  ++   +NGA +    P   N + + H   +T+ +I       Q +R
Sbjct: 27  LTGTLTNALRLHLPHR---RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILR 83

Query: 261 VRRSHGLRPSICSLTMSAVCCSKL 332
                GLR  IC L     C   L
Sbjct: 84  GHTRQGLRCRICKLNAHGDCAPNL 107


>BT025842-1|ABF85742.1|  818|Drosophila melanogaster IP12350p
           protein.
          Length = 818

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 18/65 (27%), Positives = 26/65 (40%)
 Frame = +3

Query: 138 QNGALTGQVSPSSQNTNITRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 317
           +NGA +    P   N + + H   +T+ +I       Q +R     GLR  IC L     
Sbjct: 689 RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 748

Query: 318 CCSKL 332
           C   L
Sbjct: 749 CAPNL 753


>BT024328-1|ABC86390.1|  593|Drosophila melanogaster IP10742p
           protein.
          Length = 593

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 18/65 (27%), Positives = 26/65 (40%)
 Frame = +3

Query: 138 QNGALTGQVSPSSQNTNITRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 317
           +NGA +    P   N + + H   +T+ +I       Q +R     GLR  IC L     
Sbjct: 464 RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 523

Query: 318 CCSKL 332
           C   L
Sbjct: 524 CAPNL 528


>BT022956-1|AAY55372.1|  148|Drosophila melanogaster IP04235p
           protein.
          Length = 148

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 18/65 (27%), Positives = 26/65 (40%)
 Frame = +3

Query: 138 QNGALTGQVSPSSQNTNITRHQSLWTFIRIRGTKSLQQ*VRVRRSHGLRPSICSLTMSAV 317
           +NGA +    P   N + + H   +T+ +I       Q +R     GLR  IC L     
Sbjct: 26  RNGASSTASEPLRPNLDGSHHLQEYTYKKITACDVCSQILRGHTRQGLRCRICKLNAHGD 85

Query: 318 CCSKL 332
           C   L
Sbjct: 86  CAPNL 90


>AY061331-1|AAL28879.1|  403|Drosophila melanogaster LD25702p
           protein.
          Length = 403

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +2

Query: 536 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 691
           ++DLP + E + ++    D  PP A++   PF  S      LR      G +
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 222


>AE014296-1025|AAF50735.1|  525|Drosophila melanogaster CG10489-PA
           protein.
          Length = 525

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +2

Query: 536 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 691
           ++DLP + E + ++    D  PP A++   PF  S      LR      G +
Sbjct: 293 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 344


>AB102715-1|BAD10843.1|  403|Drosophila melanogaster DNA polymerase
           epsilon secondsubunit protein.
          Length = 403

 Score = 29.5 bits (63), Expect = 6.2
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +2

Query: 536 KVDLPSIFENISEVPERVDPQPPAAVLASSPFVTSQPTEELLREFETVYGAV 691
           ++DLP + E + ++    D  PP A++   PF  S      LR      G +
Sbjct: 171 RLDLPVVMEKLRQLFVGYDSCPPQAIVLMGPFTASTRNHHELRHHLDALGGL 222


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,237,574
Number of Sequences: 53049
Number of extensions: 673403
Number of successful extensions: 1888
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1888
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)