Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_M20
(829 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical pr... 71 1e-12
Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical pr... 64 9e-11
Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical p... 58 1e-08
Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical pr... 31 0.76
Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical pr... 29 5.4
U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormon... 29 5.4
Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical pr... 28 7.1
L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical pr... 28 7.1
L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical pr... 28 7.1
AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical ... 28 7.1
AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical ... 28 7.1
Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical pr... 28 9.4
>Z72507-6|CAA96631.1| 398|Caenorhabditis elegans Hypothetical
protein F17C11.9a protein.
Length = 398
Score = 70.5 bits (165), Expect = 1e-12
Identities = 43/114 (37%), Positives = 63/114 (55%)
Frame = +2
Query: 41 KFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPAS 220
KFP G PAFE G LL + +I ++ S A QW +++ LLPA
Sbjct: 39 KFPLGVTPAFE---GDALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAV 88
Query: 221 CAWVFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTERITLADVIV 382
+V P + F+K+ VE+ K++L L+VLD L+ +T+LV ER++LADV V
Sbjct: 89 LGYVLPSVSAANFDKKTVEQYKNELNGQLQVLDRVLVKKTYLVGERLSLADVSV 142
Score = 64.5 bits (150), Expect = 9e-11
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Frame = +3
Query: 384 SVTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQEL 563
++ LL AFQ+VLD + R S++NV RWF TV +QP V V+G ++L ++ ++ K+ EL
Sbjct: 143 ALDLLPAFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTEL 202
Query: 564 AGAQNXXXXXXXXXXXXXRATQEEGGSCS*P*RGGA*KA*GVKDPSTLCLK---VLQHG* 734
+ + + + + P K KDP K VL +
Sbjct: 203 SA----KVAKSAPKAEKPKKEAKPAAAAAQP-EDDEPKEEKSKDPFQDMPKGTFVLDN-- 255
Query: 735 FKRVYSNED-XXKSIPYFW 788
FKR YSNED K+IP+FW
Sbjct: 256 FKRSYSNEDTATKAIPHFW 274
>Z72507-7|CAD56569.1| 373|Caenorhabditis elegans Hypothetical
protein F17C11.9b protein.
Length = 373
Score = 64.5 bits (150), Expect = 9e-11
Identities = 47/139 (33%), Positives = 70/139 (50%), Gaps = 4/139 (2%)
Frame = +3
Query: 384 SVTLLHAFQHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQEL 563
++ LL AFQ+VLD + R S++NV RWF TV +QP V V+G ++L ++ ++ K+ EL
Sbjct: 118 ALDLLPAFQYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTEL 177
Query: 564 AGAQNXXXXXXXXXXXXXRATQEEGGSCS*P*RGGA*KA*GVKDPSTLCLK---VLQHG* 734
+ + + + + P K KDP K VL +
Sbjct: 178 SA----KVAKSAPKAEKPKKEAKPAAAAAQP-EDDEPKEEKSKDPFQDMPKGTFVLDN-- 230
Query: 735 FKRVYSNED-XXKSIPYFW 788
FKR YSNED K+IP+FW
Sbjct: 231 FKRSYSNEDTATKAIPHFW 249
Score = 62.5 bits (145), Expect = 4e-10
Identities = 33/94 (35%), Positives = 54/94 (57%)
Frame = +2
Query: 101 ESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPASCAWVFPYLGIMQFNKQNVER 280
E +A+ + + L + A QW +++ LLPA +V P + F+K+ VE+
Sbjct: 24 EGDALLFGAESIGLHLTGTSANAETVQWLQFAEGYLLPAVLGYVLPSVSAANFDKKTVEQ 83
Query: 281 AKSDLLAALKVLDGHLLTRTFLVTERITLADVIV 382
K++L L+VLD L+ +T+LV ER++LADV V
Sbjct: 84 YKNELNGQLQVLDRVLVKKTYLVGERLSLADVSV 117
>Z72507-15|CAJ55245.1| 365|Caenorhabditis elegans Hypothetical
protein F17C11.9c protein.
Length = 365
Score = 57.6 bits (133), Expect = 1e-08
Identities = 43/131 (32%), Positives = 64/131 (48%), Gaps = 4/131 (3%)
Frame = +3
Query: 408 QHVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQELAGAQNXXX 587
Q+VLD + R S++NV RWF TV +QP V V+G ++L ++ ++ K+ EL+
Sbjct: 118 QYVLDANARKSIVNVTRWFRTVVNQPAVKEVLGEVSLASSVAQFNQAKFTELSA----KV 173
Query: 588 XXXXXXXXXXRATQEEGGSCS*P*RGGA*KA*GVKDPSTLCLK---VLQHG*FKRVYSNE 758
+ + + + P K KDP K VL + FKR YSNE
Sbjct: 174 AKSAPKAEKPKKEAKPAAAAAQP-EDDEPKEEKSKDPFQDMPKGTFVLDN--FKRSYSNE 230
Query: 759 D-XXKSIPYFW 788
D K+IP+FW
Sbjct: 231 DTATKAIPHFW 241
Score = 47.2 bits (107), Expect = 1e-05
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 1/96 (1%)
Frame = +2
Query: 41 KFPAGKVPAFESADGKVLLTESNAIAYYVANESLRGGDLATQARVWQWASWSDSELLPAS 220
KFP G PAFE G LL + +I ++ S A QW +++ LLPA
Sbjct: 39 KFPLGVTPAFE---GDALLFGAESIGLHLTGTS-------ANAETVQWLQFAEGYLLPAV 88
Query: 221 CAWVFPYLGIMQFNKQNVERAKSDLLAALK-VLDGH 325
+V P + F+K+ VE+ K++L L+ VLD +
Sbjct: 89 LGYVLPSVSAANFDKKTVEQYKNELNGQLQYVLDAN 124
>Z81512-3|CAE46668.1| 3175|Caenorhabditis elegans Hypothetical
protein F25C8.3b protein.
Length = 3175
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 411 HVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQEL 563
H L PS+ ++L +V RW L A P V GSL L P Q++
Sbjct: 85 HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLLANVGEKKLPTSLQKI 135
>Z81512-2|CAB04172.2| 3184|Caenorhabditis elegans Hypothetical
protein F25C8.3a protein.
Length = 3184
Score = 31.5 bits (68), Expect = 0.76
Identities = 18/51 (35%), Positives = 24/51 (47%)
Frame = +3
Query: 411 HVLDPSVRSSLINVQRWFLTVAHQPQVSAVVGSLTLCAAPPTYDPKKYQEL 563
H L PS+ ++L +V RW L A P V GSL L P Q++
Sbjct: 85 HGLSPSLSNALASVSRWKLVRAALPHVIQCCGSLLLANVGEKKLPTSLQKI 135
>Z81088-5|CAB03133.1| 215|Caenorhabditis elegans Hypothetical
protein F53F1.5 protein.
Length = 215
Score = 28.7 bits (61), Expect = 5.4
Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Frame = -1
Query: 703 VEGSLTP*AFQ-APPLQGQEQLPPSSWVALSFHTSYLFLPSFLFCAPANSWYFLGSYVGG 527
V G T AF A P+ G Q P+ A +Y P+F APA Y G GG
Sbjct: 93 VGGYATGPAFGGAAPIGGAYQAAPAFVGAAPVGGAYQSGPAFGGAAPAGGAYQSGPAFGG 152
Query: 526 AAQSV 512
AA +V
Sbjct: 153 AAPAV 157
>U53333-12|AAA96165.1| 387|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 78 protein.
Length = 387
Score = 28.7 bits (61), Expect = 5.4
Identities = 12/40 (30%), Positives = 23/40 (57%)
Frame = +2
Query: 188 SWSDSELLPASCAWVFPYLGIMQFNKQNVERAKSDLLAAL 307
S+ ++ +L A C W + + + +K+NV + KS L+ L
Sbjct: 298 SFEENAILKALCCWQTAHFKLEECDKENVRKQKSLLVQCL 337
>Z68012-5|CAA92019.1| 408|Caenorhabditis elegans Hypothetical
protein T24D5.5 protein.
Length = 408
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -3
Query: 131 WQRSKRWHCFQLEAPFHRHFRMQALFRQETSSRSLRTCWSRQT 3
W+R +R H E RHF+ + + SL CW R T
Sbjct: 304 WKRYQRKHKMGSEET--RHFKGSSSLSNMNAQSSLMVCWKRST 344
>L16622-3|ABC71837.1| 254|Caenorhabditis elegans Hypothetical
protein C02D5.3c protein.
Length = 254
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 20 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 127
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 62 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 97
>L16622-1|ABB51198.1| 537|Caenorhabditis elegans Hypothetical
protein C02D5.3a protein.
Length = 537
Score = 28.3 bits (60), Expect = 7.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 20 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 127
K + F K G+VPA E +GK ++ ES I Y+
Sbjct: 345 KPDWFFTKHYKGQVPALEHDEGKKIVIESAVIPEYL 380
>AF025462-3|AAB71002.1| 309|Caenorhabditis elegans Hypothetical
protein K10F12.4a protein.
Length = 309
Score = 28.3 bits (60), Expect = 7.1
Identities = 16/32 (50%), Positives = 21/32 (65%)
Frame = +2
Query: 32 FLKKFPAGKVPAFESADGKVLLTESNAIAYYV 127
+L K P G+VPA E +GKV + ESN I Y+
Sbjct: 138 YLPKSPIGRVPALE-INGKV-VWESNVIVEYL 167
>AC024832-3|AAF59615.1| 121|Caenorhabditis elegans Hypothetical
protein Y57E12AL.2 protein.
Length = 121
Score = 28.3 bits (60), Expect = 7.1
Identities = 15/43 (34%), Positives = 23/43 (53%)
Frame = +2
Query: 230 VFPYLGIMQFNKQNVERAKSDLLAALKVLDGHLLTRTFLVTER 358
VF L ++ F +N E+ KS++LAA G TF+ T +
Sbjct: 35 VFALLAVVAFANRNPEQMKSEMLAAGVSAAGVATISTFMETHK 77
>Z93377-6|CAB07572.2| 254|Caenorhabditis elegans Hypothetical
protein F13A7.10 protein.
Length = 254
Score = 27.9 bits (59), Expect = 9.4
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +2
Query: 20 KSEDFLKKFPAGKVPAFESADGKVLLTESNAIAYYV 127
K + + K G+VP E A+GK L+ ES I Y+
Sbjct: 62 KPDWYFTKNYKGQVPTLEHAEGKKLVIESAVIPEYL 97
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,819,533
Number of Sequences: 27780
Number of extensions: 373828
Number of successful extensions: 1065
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1061
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2050970610
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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