Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_M18
         (846 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ280323-1|ABB91801.1|  434|Homo sapiens TSGP-L protein.               31   4.0  
DQ280322-1|ABB91800.1|  294|Homo sapiens TSGP-S protein.               31   4.0  
BC052300-1|AAH52300.1|  434|Homo sapiens family with sequence si...    31   4.0  
BC007828-1|AAH07828.1|  294|Homo sapiens FAM83A protein protein.       31   4.0  
AK098407-1|BAC05299.1|  269|Homo sapiens protein ( Homo sapiens ...    31   4.0  
AF497803-1|AAQ07260.1|  367|Homo sapiens BJ-TSA-9 protein.             31   6.9  

>DQ280323-1|ABB91801.1|  434|Homo sapiens TSGP-L protein.
          Length = 434

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -3

Query: 670 PPYPGAIPRHSRFSTEXAEPPDRTPLTPESDRSSASRAHT 551
           P  PGA P + R S+      DRT   P S RS+ S   T
Sbjct: 307 PVPPGAAPANGRLSSSSGSASDRTSSNPFSGRSAGSHPGT 346


>DQ280322-1|ABB91800.1|  294|Homo sapiens TSGP-S protein.
          Length = 294

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -3

Query: 670 PPYPGAIPRHSRFSTEXAEPPDRTPLTPESDRSSASRAHT 551
           P  PGA P + R S+      DRT   P S RS+ S   T
Sbjct: 251 PVPPGAAPANGRLSSSSGSASDRTSSNPFSGRSAGSHPGT 290


>BC052300-1|AAH52300.1|  434|Homo sapiens family with sequence
           similarity 83, member A protein.
          Length = 434

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -3

Query: 670 PPYPGAIPRHSRFSTEXAEPPDRTPLTPESDRSSASRAHT 551
           P  PGA P + R S+      DRT   P S RS+ S   T
Sbjct: 307 PVPPGAAPANGRLSSSSGSASDRTSSNPFSGRSAGSHPGT 346


>BC007828-1|AAH07828.1|  294|Homo sapiens FAM83A protein protein.
          Length = 294

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -3

Query: 670 PPYPGAIPRHSRFSTEXAEPPDRTPLTPESDRSSASRAHT 551
           P  PGA P + R S+      DRT   P S RS+ S   T
Sbjct: 251 PVPPGAAPANGRLSSSSGSASDRTSSNPFSGRSAGSHPGT 290


>AK098407-1|BAC05299.1|  269|Homo sapiens protein ( Homo sapiens
           cDNA FLJ25541 fis, clone JTH00915. ).
          Length = 269

 Score = 31.5 bits (68), Expect = 4.0
 Identities = 16/40 (40%), Positives = 19/40 (47%)
 Frame = -3

Query: 670 PPYPGAIPRHSRFSTEXAEPPDRTPLTPESDRSSASRAHT 551
           P  PGA P + R S+      DRT   P S RS+ S   T
Sbjct: 142 PVPPGAAPANGRLSSSSGSASDRTSSNPFSGRSAGSHPGT 181


>AF497803-1|AAQ07260.1|  367|Homo sapiens BJ-TSA-9 protein.
          Length = 367

 Score = 30.7 bits (66), Expect = 6.9
 Identities = 15/36 (41%), Positives = 18/36 (50%)
 Frame = -3

Query: 670 PPYPGAIPRHSRFSTEXAEPPDRTPLTPESDRSSAS 563
           P  PGA P + R S+      DRT   P S RS+ S
Sbjct: 307 PVPPGAAPANGRLSSSSGSASDRTSSNPFSGRSAGS 342


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,146,370
Number of Sequences: 237096
Number of extensions: 1363573
Number of successful extensions: 6639
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6542
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6639
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)