Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_M13
(861 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
01_02_0007 + 10132380-10133201 33 0.29
05_03_0039 - 7621613-7622695 32 0.51
04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412 32 0.68
02_05_0686 - 30900748-30902167,30903442-30904742 31 0.89
04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585 31 1.2
01_05_0647 + 23910318-23910694,23911732-23911867,23912067-239122... 30 2.1
11_06_0610 - 25449085-25453284 29 3.6
04_03_0799 - 19805190-19805749,19806316-19806403 29 3.6
07_03_0089 - 13300902-13301645 29 6.3
05_03_0040 - 7646525-7647775 29 6.3
04_04_0859 + 28805836-28805842,28806405-28806492,28807474-288075... 29 6.3
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 28 8.3
07_03_0091 + 13312904-13313647 28 8.3
>01_02_0007 + 10132380-10133201
Length = 273
Score = 33.1 bits (72), Expect = 0.29
Identities = 17/51 (33%), Positives = 22/51 (43%)
Frame = +3
Query: 285 RSTKP*LSLRKFPFPTPXEKHIPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 437
R P L++ P P P + +P P P P+ PQP P Q P P
Sbjct: 40 RLVGPQRKLQQLPNPRPQPQPLPQPNPNPQPQPLPQPQPQPQPQPQPLPQP 90
Score = 31.5 bits (68), Expect = 0.89
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 321 PFPTPXEKHIPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 437
P P P + P P + P P +PQP P Q PLP
Sbjct: 62 PQPNPNPQPQPLPQPQPQPQPQPQPLPQPQPQPQPLPLP 100
Score = 28.7 bits (61), Expect = 6.3
Identities = 30/122 (24%), Positives = 37/122 (30%), Gaps = 1/122 (0%)
Frame = +3
Query: 321 PFPTPXEKHIPYPVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEG 500
P P P + P P + +P P PQP P Q P P G P
Sbjct: 56 PQPQPLPQPNPNPQPQPLPQPQPQPQPQPQPLPQPQPQPQPLPLPGPQPLPQPGPQPNPN 115
Query: 501 ALPXYMSXSTDPSPSRYMCQNLTPLKRKFMFXSK-CTCPXPYPVXXXVPXPXKGSRXCXL 677
P + +P P N PL + P P P +P P L
Sbjct: 116 PQP-LPQPNPNPQPLPQPDPNAPPLPLPQPNPNNPQPLPQPDPNAPSLPLPQPDPNAPPL 174
Query: 678 PL 683
PL
Sbjct: 175 PL 176
>05_03_0039 - 7621613-7622695
Length = 360
Score = 32.3 bits (70), Expect = 0.51
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +3
Query: 321 PFPTPXEKHIPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 437
P P P K IP+P K P P P+P+P + P+P
Sbjct: 270 PKPVPKPKPIPHPGPKPKPKPDPKLEPKPHPEPKPHPMP 308
Score = 31.1 bits (67), Expect = 1.2
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 321 PFPTPXEKHIPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 437
P+P P + P P K IP+P P+P P + P P
Sbjct: 262 PYPKPKPEPKPVPKPKPIPHPGPKPKPKPDPKLEPKPHP 300
Score = 29.9 bits (64), Expect = 2.7
Identities = 15/39 (38%), Positives = 18/39 (46%)
Frame = +3
Query: 321 PFPTPXEKHIPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 437
P P P + PYP K P PV P P+P + P P
Sbjct: 252 PKPEPKPEPKPYPKPKPEPKPVPKPKPIPHPGPKPKPKP 290
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +3
Query: 291 TKP*LSLRKFPFPTPXEKHIPYPVEKKIPYPVKVHVPQPYPXCQTCP 431
TKP L P P P + P P + PYP P+P P + P
Sbjct: 94 TKPELKPEPKPNPEPKPEPKPEPKPEPKPYPEPKPKPKPEPKPEPKP 140
Score = 28.3 bits (60), Expect = 8.3
Identities = 15/46 (32%), Positives = 19/46 (41%)
Frame = +3
Query: 276 GTRRSTKP*LSLRKFPFPTPXEKHIPYPVEKKIPYPVKVHVPQPYP 413
G + KP P P P K +P+P K P P P+P P
Sbjct: 165 GPKPEPKPEPKPHPEPKPEPKPKPVPHPEPKPEPKPEPKPHPEPKP 210
>04_03_0805 - 19850355-19850817,19851146-19851227,19852403-19852412
Length = 184
Score = 31.9 bits (69), Expect = 0.68
Identities = 24/74 (32%), Positives = 29/74 (39%), Gaps = 4/74 (5%)
Frame = +3
Query: 312 RKFPFPTPXEKHI-PYPVE---KKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTAT 479
+K P P P EK P P K IP+P P P P C C P DC A
Sbjct: 81 KKKPEPKPDEKKPDPKPKPDPCKLIPFPYPYVYPPP-PPCGGCATPHCCDCHPKPPPPAP 139
Query: 480 LPSRKEGALPXYMS 521
P++ P + S
Sbjct: 140 APAKPACGCPAWSS 153
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 31.5 bits (68), Expect = 0.89
Identities = 22/82 (26%), Positives = 24/82 (29%)
Frame = +3
Query: 612 PXPYPVXXXVPXPXKGSRXCXLPLYPGXQXGSXXXXXVXVGXTLPRAXSPXXXPLPXSKX 791
P P P S LPL PG + S P A P P P +
Sbjct: 267 PRSSPSPAPAPAARPASPSPSLPLPPGRESPSRPQSIAAAAVASP-APPPPPPPKPAAAA 325
Query: 792 PXPXPGXXXXXPXPXXXXPXXP 857
P P P P P P P
Sbjct: 326 PPPPPPPKAAPPPPPPKGPPPP 347
>04_03_0804 - 19844059-19844777,19844914-19844995,19846580-19846585
Length = 268
Score = 31.1 bits (67), Expect = 1.2
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = +3
Query: 321 PFPTPXEKHIPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 437
P P EK P P K +PYP VP PY CP P
Sbjct: 148 PPKPPPEKPPPKPECKLVPYPYP--VPYPYAGQWCCPKP 184
>01_05_0647 +
23910318-23910694,23911732-23911867,23912067-23912277,
23912357-23912724,23913793-23914081,23914173-23914372,
23914452-23914646
Length = 591
Score = 30.3 bits (65), Expect = 2.1
Identities = 15/42 (35%), Positives = 19/42 (45%), Gaps = 2/42 (4%)
Frame = +3
Query: 321 PFPTPXEKHIPYPVEKKIPYPVKV--HVPQPYPXCQTCPLPS 440
P P P +H P P E+ P P V H P P + P P+
Sbjct: 47 PHPLPPSRHHPPPPEEPEPEPTPVNHHYPPPTTPAYSLPPPA 88
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 3.6
Identities = 19/71 (26%), Positives = 28/71 (39%)
Frame = +3
Query: 327 PTPXEKHIPYPVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDCQGTSSRTATLPSRKEGAL 506
P P K +P P +P P +P P P + P P ++ ++ A P KE
Sbjct: 1305 PPPAVKPLPPPAPVSLPPPAVKPLPPPVPQV-SLPPPK-QESLPPPAKEAEAPPAKESKP 1362
Query: 507 PXYMSXSTDPS 539
P M P+
Sbjct: 1363 PPAMEAEAPPA 1373
>04_03_0799 - 19805190-19805749,19806316-19806403
Length = 215
Score = 29.5 bits (63), Expect = 3.6
Identities = 15/32 (46%), Positives = 17/32 (53%)
Frame = +3
Query: 357 PVEKKIPYPVKVHVPQPYPXCQTCPLPS*RDC 452
PV K +P+PV P P P C CP PS C
Sbjct: 94 PVCKLVPFPVPYPAPPPPPAC--CP-PSTHQC 122
>07_03_0089 - 13300902-13301645
Length = 247
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +3
Query: 321 PFPTPXEKHIPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 437
P P P K P P K P P PQP P P P
Sbjct: 94 PNPQPDPKPSPQPDPKPTPQPDPKQDPQPNPQPDPKPTP 132
Score = 28.3 bits (60), Expect = 8.3
Identities = 17/49 (34%), Positives = 18/49 (36%)
Frame = +3
Query: 291 TKP*LSLRKFPFPTPXEKHIPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 437
TKP P P P K P P K P P P+P P P P
Sbjct: 56 TKPSPQPNPQPNPQPDPKPSPQPDPKPTPQPEPKQDPKPNPQPDPKPSP 104
>05_03_0040 - 7646525-7647775
Length = 416
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 321 PFPTPXEKHIPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 437
P P P K P P K P P V P+P P + P P
Sbjct: 60 PKPKPHPKPTPKPEPKPEPEPKPVPEPEPKPEPKPEPKP 98
Score = 28.7 bits (61), Expect = 6.3
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = +3
Query: 321 PFPTPXEKHIPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 437
P PTP + P P K +P P P+P P + P P
Sbjct: 66 PKPTPKPEPKPEPEPKPVPEPEPKPEPKPEPKPEPKPEP 104
Score = 28.7 bits (61), Expect = 6.3
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +3
Query: 321 PFPTPXEKHIPYPVEKKIPYPVKVHVPQPYPXCQTCPLP 437
P P P K P P K P P P+PYP + P P
Sbjct: 352 PKPQPEPKPEPKPEPKPEPKPEPKPEPKPYPEPKPEPKP 390
>04_04_0859 +
28805836-28805842,28806405-28806492,28807474-28807558,
28807638-28807763,28807819-28807968,28808497-28808541,
28808612-28808875,28809843-28809887,28810395-28810430,
28812048-28812816,28813063-28813925,28814024-28814182,
28814440-28814558,28815356-28815417,28816677-28816805,
28817395-28817460,28817757-28817890,28818025-28818162,
28818630-28818889,28818996-28819107,28819590-28819675,
28820655-28820735,28822841-28822928,28823222-28823260,
28823847-28823964,28824063-28824130,28824884-28824981,
28825238-28825397,28825691-28825816,28825876-28825945,
28826046-28826449
Length = 1664
Score = 28.7 bits (61), Expect = 6.3
Identities = 13/32 (40%), Positives = 15/32 (46%)
Frame = +3
Query: 387 KVHVPQPYPXCQTCPLPS*RDCQGTSSRTATL 482
K+ +P P C TC S RDC G T L
Sbjct: 78 KLGLPNGAPQCATCGSRSIRDCDGKKKLTGKL 109
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 28.3 bits (60), Expect = 8.3
Identities = 21/79 (26%), Positives = 25/79 (31%)
Frame = +3
Query: 612 PXPYPVXXXVPXPXKGSRXCXLPLYPGXQXGSXXXXXVXVGXTLPRAXSPXXXPLPXSKX 791
P P P+ P S C PL P + + +LP P PLP
Sbjct: 1137 PPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPP-PLSPSLP--PPPPPPPLPSGPP 1193
Query: 792 PXPXPGXXXXXPXPXXXXP 848
P P P P P P
Sbjct: 1194 PQPAPPPLPIQPPPIPPPP 1212
>07_03_0091 + 13312904-13313647
Length = 247
Score = 28.3 bits (60), Expect = 8.3
Identities = 16/41 (39%), Positives = 16/41 (39%)
Frame = +3
Query: 291 TKP*LSLRKFPFPTPXEKHIPYPVEKKIPYPVKVHVPQPYP 413
TKP P P P K P P K P P PQP P
Sbjct: 56 TKPSPQPNPQPNPQPDPKPSPQPDPKPTPQPEPKQDPQPNP 96
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,172,057
Number of Sequences: 37544
Number of extensions: 270103
Number of successful extensions: 1259
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 729
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2409218220
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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