Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_M12
         (856 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p pro...   270   1e-72
AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA...   270   1e-72
AE013599-3622|AAF47022.3|  406|Drosophila melanogaster CG33150-P...    34   0.29 
AY071568-1|AAL49190.1|  499|Drosophila melanogaster RE63174p pro...    30   4.7  
AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-P...    30   4.7  
AE014296-131|AAF47409.3|  499|Drosophila melanogaster CG13895-PA...    30   4.7  

>AY089607-1|AAL90345.1|  539|Drosophila melanogaster RE21692p
           protein.
          Length = 539

 Score =  270 bits (663), Expect = 1e-72
 Identities = 137/258 (53%), Positives = 171/258 (66%), Gaps = 4/258 (1%)
 Frame = +2

Query: 80  MYSSDDYNEGGYESYGDYEAQSTEHYEPEYDRSSYY-KMPDMVKKFLVYFRNMINEGVTY 256
           MY  D+Y     + Y DY        + EY+R+ Y  +MPD VK FL+ F   I EG  Y
Sbjct: 1   MYGGDEYATNS-DYYDDYAHTGDPQLDMEYERNYYAARMPDNVKYFLINFCQAIKEGNLY 59

Query: 257 EILNLYENTFPTLTEKYFENTPWPDEDEVSPIVDNDNVFMILYKELYYRDIYARVPGGPK 436
           +I N+YENTFP +++ +F+ T WP+E EV+ IVDND VF+ILYKELYYR I+AR+PGGPK
Sbjct: 60  DIQNMYENTFPQISDHHFDKTAWPEEQEVAAIVDNDKVFLILYKELYYRHIHARIPGGPK 119

Query: 437 PEQRFHSFYNYCDLFNYILSV-TPVPLELPDQWLWELIDEFVYQFQSFAQYRSRTTKLSP 613
            EQR +SF+NYCD FN I+S   PV LELPD WLWEL+DEFVYQFQ+FAQYR+R T+ S 
Sbjct: 120 LEQRINSFFNYCDFFNLIISAQNPVMLELPDIWLWELVDEFVYQFQNFAQYRARLTEKSQ 179

Query: 614 AEIEAL--NTENKAWNVLCILNVLHSLVDKSNIKRQLEVYASGW*S*XCGWRXXVVXXXX 787
            EI+ L  N  N+ W++LCILNVLHSLVD SNIK+QLE  + G            +    
Sbjct: 180 DEIQQLCVNHSNE-WSILCILNVLHSLVDISNIKKQLEAISQGVDPQTVAGDFGKLSFYK 238

Query: 788 NAGIFSLXGXLXLXXXLG 841
             G FSL G L +   LG
Sbjct: 239 MLGYFSLVGLLRVHSLLG 256


>AE014296-2102|AAF49952.1|  539|Drosophila melanogaster CG5642-PA
           protein.
          Length = 539

 Score =  270 bits (663), Expect = 1e-72
 Identities = 137/258 (53%), Positives = 171/258 (66%), Gaps = 4/258 (1%)
 Frame = +2

Query: 80  MYSSDDYNEGGYESYGDYEAQSTEHYEPEYDRSSYY-KMPDMVKKFLVYFRNMINEGVTY 256
           MY  D+Y     + Y DY        + EY+R+ Y  +MPD VK FL+ F   I EG  Y
Sbjct: 1   MYGGDEYATNS-DYYDDYAHTGDPQLDMEYERNYYAARMPDNVKYFLINFCQAIKEGNLY 59

Query: 257 EILNLYENTFPTLTEKYFENTPWPDEDEVSPIVDNDNVFMILYKELYYRDIYARVPGGPK 436
           +I N+YENTFP +++ +F+ T WP+E EV+ IVDND VF+ILYKELYYR I+AR+PGGPK
Sbjct: 60  DIQNMYENTFPQISDHHFDKTAWPEEQEVAAIVDNDKVFLILYKELYYRHIHARIPGGPK 119

Query: 437 PEQRFHSFYNYCDLFNYILSV-TPVPLELPDQWLWELIDEFVYQFQSFAQYRSRTTKLSP 613
            EQR +SF+NYCD FN I+S   PV LELPD WLWEL+DEFVYQFQ+FAQYR+R T+ S 
Sbjct: 120 LEQRINSFFNYCDFFNLIISAQNPVMLELPDIWLWELVDEFVYQFQNFAQYRARLTEKSQ 179

Query: 614 AEIEAL--NTENKAWNVLCILNVLHSLVDKSNIKRQLEVYASGW*S*XCGWRXXVVXXXX 787
            EI+ L  N  N+ W++LCILNVLHSLVD SNIK+QLE  + G            +    
Sbjct: 180 DEIQQLCVNHSNE-WSILCILNVLHSLVDISNIKKQLEAISQGVDPQTVAGDFGKLSFYK 238

Query: 788 NAGIFSLXGXLXLXXXLG 841
             G FSL G L +   LG
Sbjct: 239 MLGYFSLVGLLRVHSLLG 256


>AE013599-3622|AAF47022.3|  406|Drosophila melanogaster CG33150-PA
           protein.
          Length = 406

 Score = 33.9 bits (74), Expect = 0.29
 Identities = 18/62 (29%), Positives = 33/62 (53%)
 Frame = -1

Query: 274 IEVQDLICYTFINHVAKVNKEFLDHVRHFIIRRPVIFRLVVFCGLCFIVAIGFVTSLIII 95
           I+ +   C T ++ V+   K+  D + HFII+     R  V CG+   + + F+T+L++ 
Sbjct: 318 IQNEHSTCLTLLSRVSYARKDIQDTITHFIIQMRTNVRQHVVCGV-INLDLKFLTTLLVA 376

Query: 94  VA 89
            A
Sbjct: 377 SA 378


>AY071568-1|AAL49190.1|  499|Drosophila melanogaster RE63174p
           protein.
          Length = 499

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = -1

Query: 706 NIRLVYERVQNIEDAQYVPSLILSIKSFNFSWTQLCGTRPVLGKRLELI--NKFINKLPQ 533
           N+  + ERV  I     VP      ++FN SW Q+   + ++  R  ++  +K  N+L Q
Sbjct: 20  NVLTLEERVAAIRQYDIVPMYSKIARNFNCSWEQI---KSIVSNREAILEFHKATNRLSQ 76

Query: 532 PLVRQLERYR 503
           P  +  E  R
Sbjct: 77  PANKDAELRR 86


>AE014298-1416|AAF46559.1| 1161|Drosophila melanogaster CG15311-PA
            protein.
          Length = 1161

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 23/72 (31%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
 Frame = +2

Query: 92   DDYNEGGYESYGDYE---AQSTEHYEPEYDRSSYYKMPDMVKKFLVYFRNMINEGVTYEI 262
            + Y E   E Y DYE     + E  E + +R     +P  +KK+     N  N+    ++
Sbjct: 823  EHYRETHPELYSDYEDDYESAAELEEAQQERGEEANLPPYIKKY-----NRRNK----QL 873

Query: 263  LNLYENTFPTLT 298
            LNL E T PT T
Sbjct: 874  LNLLEGTLPTPT 885


>AE014296-131|AAF47409.3|  499|Drosophila melanogaster CG13895-PA
           protein.
          Length = 499

 Score = 29.9 bits (64), Expect = 4.7
 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
 Frame = -1

Query: 706 NIRLVYERVQNIEDAQYVPSLILSIKSFNFSWTQLCGTRPVLGKRLELI--NKFINKLPQ 533
           N+  + ERV  I     VP      ++FN SW Q+   + ++  R  ++  +K  N+L Q
Sbjct: 20  NVLTLEERVAAIRQYDIVPMYSKIARNFNCSWEQI---KSIVSNREAILEFHKATNRLSQ 76

Query: 532 PLVRQLERYR 503
           P  +  E  R
Sbjct: 77  PANKDAELRR 86


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,330,680
Number of Sequences: 53049
Number of extensions: 736186
Number of successful extensions: 1967
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1877
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1963
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4106450400
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)