Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_M07
(816 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 198 8e-52
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 198 8e-52
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 141 9e-35
SPBC1306.01c ||SPBC409.22c|translation elongation factor G|Schiz... 82 8e-17
SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces po... 70 3e-13
SPBC660.10 |||translation elongation factor G|Schizosaccharomyce... 69 8e-13
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 62 9e-11
SPBC9B6.04c |tuf1||mitochondrial translation elongation factor E... 36 0.005
SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha Ef... 34 0.028
SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha Ef... 34 0.028
SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha Ef... 34 0.028
SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit Mcm5|Schi... 31 0.26
SPBC1271.15c |||translation initiation factor IF-2Mt|Schizosacch... 30 0.45
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 28 1.8
SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein |S... 28 1.8
SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal protein... 27 2.4
SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr 2|... 27 3.2
SPAC3H1.14 ||SPAC9G1.01|cytoplasmic vesicle protein, Vid24 famil... 26 7.4
SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting endonucl... 26 7.4
SPBC19F5.03 |||inositol polyphosphate phosphatase |Schizosacchar... 25 9.7
SPCC1235.05c |fft2||fun thirty related protein Fft2|Schizosaccha... 25 9.7
SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|c... 25 9.7
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 198 bits (483), Expect = 8e-52
Identities = 101/167 (60%), Positives = 124/167 (74%), Gaps = 1/167 (0%)
Frame = +2
Query: 74 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 253
MV FT +E+R +M K N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF DTR
Sbjct: 1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTR 60
Query: 254 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSE-KGFLINLIDSPGHVDFSSEV 430
DEQ+R +TIKSTAIS+F E+ + D+ D +E ++ FL+NLIDSPGHVDFSSEV
Sbjct: 61 ADEQERGVTIKSTAISLFAEMTDDDM-----KDMKEPADGTDFLVNLIDSPGHVDFSSEV 115
Query: 431 TAALRVTXXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 571
TAALRVT QTETVLRQA+ ERI+P++ +NK+DR
Sbjct: 116 TAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNKVDR 162
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 198 bits (483), Expect = 8e-52
Identities = 101/167 (60%), Positives = 124/167 (74%), Gaps = 1/167 (0%)
Frame = +2
Query: 74 MVNFTVDEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTR 253
MV FT +E+R +M K N+RNMSVIAHVDHGKSTLTDSLV KAGII+ A+AG+ RF DTR
Sbjct: 1 MVAFTPEEVRNLMGKPSNVRNMSVIAHVDHGKSTLTDSLVQKAGIISAAKAGDARFMDTR 60
Query: 254 KDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSE-KGFLINLIDSPGHVDFSSEV 430
DEQ+R +TIKSTAIS+F E+ + D+ D +E ++ FL+NLIDSPGHVDFSSEV
Sbjct: 61 ADEQERGVTIKSTAISLFAEMTDDDM-----KDMKEPADGTDFLVNLIDSPGHVDFSSEV 115
Query: 431 TAALRVTXXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 571
TAALRVT QTETVLRQA+ ERI+P++ +NK+DR
Sbjct: 116 TAALRVTDGALVVVDTIEGVCVQTETVLRQALGERIRPVVVVNKVDR 162
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1000
Score = 141 bits (342), Expect = 9e-35
Identities = 78/160 (48%), Positives = 106/160 (66%)
Frame = +2
Query: 92 DEIRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDR 271
+++ + + NIRN +++AHVDHGK+TL DSL++ GII+ AG RF D R+DE R
Sbjct: 7 EKLVSLQKNQENIRNFTLLAHVDHGKTTLADSLLASNGIISSKLAGTVRFLDFREDEITR 66
Query: 272 CITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVT 451
IT+KS+AIS+FF++ I+ D++ + EK +LINLIDSPGHVDFSSEV++A R+
Sbjct: 67 GITMKSSAISLFFKV-------ISQNDEK-RVEKDYLINLIDSPGHVDFSSEVSSASRLC 118
Query: 452 XXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 571
QT TVLRQA +RIK IL +NKMDR
Sbjct: 119 DGAFVLVDAVEGVCSQTITVLRQAWIDRIKVILVINKMDR 158
>SPBC1306.01c ||SPBC409.22c|translation elongation factor
G|Schizosaccharomyces pombe|chr 2|||Manual
Length = 770
Score = 82.2 bits (194), Expect = 8e-17
Identities = 59/171 (34%), Positives = 83/171 (48%), Gaps = 7/171 (4%)
Frame = +2
Query: 80 NFTVDEIRGMMDKKR--NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARA--GETRF-- 241
N + E DKKR IRN+ + AH+D GK+T T+ ++ G I G+
Sbjct: 41 NLNIQEQLNDNDKKRLKQIRNIGISAHIDSGKTTFTERVLYYTGRIKDIHEVRGKDNVGA 100
Query: 242 -TDTRKDEQDRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDF 418
D + E+++ ITI+S A +E + N Q+ EK + IN+ID+PGH+DF
Sbjct: 101 KMDFMELEREKGITIQSAATHCTWERTVDQIE--ANEKQKTDFEKSYNINIIDTPGHIDF 158
Query: 419 SSEVTAALRVTXXXXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 571
+ EV ALRV QT TV RQ + I F+NKMDR
Sbjct: 159 TIEVERALRVLDGAVLVLCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDR 209
>SPAC1B3.04c |||mitochondrial GTPase Guf1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 646
Score = 70.1 bits (164), Expect = 3e-13
Identities = 48/157 (30%), Positives = 76/157 (48%)
Frame = +2
Query: 98 IRGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCI 277
+RG+ + +RN +VIAH+DHGKSTL+D ++ G+I +F D + E+ R I
Sbjct: 50 VRGIPQNR--VRNWAVIAHIDHGKSTLSDCILKLTGVI-NEHNFRNQFLDKLEVERRRGI 106
Query: 278 TIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTXX 457
T+K+ SM + + +L+NLID+PGHVDF +EV +L
Sbjct: 107 TVKAQTCSMIYYYH----------------GQSYLLNLIDTPGHVDFRAEVMHSLAACEG 150
Query: 458 XXXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMD 568
QT + A ++ + I +NK+D
Sbjct: 151 CILLVDASQGIQAQTLSNFYMAFSQNLVIIPVLNKVD 187
>SPBC660.10 |||translation elongation factor G|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 813
Score = 68.9 bits (161), Expect = 8e-13
Identities = 52/151 (34%), Positives = 74/151 (49%), Gaps = 2/151 (1%)
Frame = +2
Query: 125 NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFT--DTRKDEQDRCITIKSTAI 298
+IRN+ +IAH+D GK+TLT+ ++ G + +T T D E+ R ITI S AI
Sbjct: 27 SIRNVGIIAHIDAGKTTLTEKMLYYGGFTSHFGNVDTGDTVMDYLPAERQRGITINSAAI 86
Query: 299 SMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTXXXXXXXXX 478
S + +QR INLID+PGH DF+ EV ++ V
Sbjct: 87 SFTWR------------NQR--------INLIDTPGHADFTFEVERSVAVLDGAVAIIDG 126
Query: 479 XXXXXXQTETVLRQAIAERIKPILFMNKMDR 571
QT+ V +QA I ++F+NKMDR
Sbjct: 127 SAGVEAQTKVVWKQATKRGIPKVIFVNKMDR 157
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 62.1 bits (144), Expect = 9e-11
Identities = 44/157 (28%), Positives = 72/157 (45%), Gaps = 1/157 (0%)
Frame = +2
Query: 104 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAGI-IAGARAGETRFTDTRKDEQDRCIT 280
G++ ++R+ V H+ HGKS L D LV + R+TDT E++R ++
Sbjct: 132 GLLTGTDDVRSFIVAGHLHHGKSALLDLLVYYTHPDTKPPKRRSLRYTDTHYLERERVMS 191
Query: 281 IKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTAALRVTXXX 460
IKST +++ D + K+ F ID+PGHVDF EV A + ++
Sbjct: 192 IKSTPLTLAVS------------DMKGKT---FAFQCIDTPGHVDFVDEVAAPMAISDGV 236
Query: 461 XXXXXXXXXXXXQTETVLRQAIAERIKPILFMNKMDR 571
T +++ AI + +L +NK+DR
Sbjct: 237 VLVVDVIEGVMINTTRIIKHAILHDMPIVLVLNKVDR 273
>SPBC9B6.04c |tuf1||mitochondrial translation elongation factor
EF-Tu Tuf1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 439
Score = 36.3 bits (80), Expect = 0.005
Identities = 21/61 (34%), Positives = 32/61 (52%)
Frame = +2
Query: 116 KKRNIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTA 295
KK ++ N+ I HVDHGK+TLT ++ + A + D +E+ R ITI S
Sbjct: 50 KKPHV-NIGTIGHVDHGKTTLTAAITKCLSDLGQASFMDYSQIDKAPEEKARGITISSAH 108
Query: 296 I 298
+
Sbjct: 109 V 109
>SPAC23A1.10 |ef1a-b||translation elongation factor EF-1 alpha
Ef1a-b |Schizosaccharomyces pombe|chr 1|||Manual
Length = 460
Score = 33.9 bits (74), Expect = 0.028
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 110 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 205
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32
>SPCC794.09c |ef1a-a||translation elongation factor EF-1 alpha
Ef1a-a |Schizosaccharomyces pombe|chr 3|||Manual
Length = 460
Score = 33.9 bits (74), Expect = 0.028
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 110 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 205
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32
>SPBC839.15c |ef1a-c||translation elongation factor EF-1 alpha
Ef1a-c |Schizosaccharomyces pombe|chr 2|||Manual
Length = 460
Score = 33.9 bits (74), Expect = 0.028
Identities = 16/32 (50%), Positives = 20/32 (62%)
Frame = +2
Query: 110 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSKAG 205
M K++ N+ VI HVD GKST T L+ K G
Sbjct: 1 MGKEKGHINVVVIGHVDSGKSTTTGHLIYKCG 32
>SPAC1B2.05 |mcm5|nda4, SPAC3F10.01|MCM complex subunit
Mcm5|Schizosaccharomyces pombe|chr 1|||Manual
Length = 720
Score = 30.7 bits (66), Expect = 0.26
Identities = 28/117 (23%), Positives = 52/117 (44%), Gaps = 1/117 (0%)
Frame = +2
Query: 89 VDEIRGMMDKKR-NIRNMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQ 265
+DE M D+ R I + K+ +T L S+ ++A A R+ D + +
Sbjct: 435 IDEFDKMRDEDRVAIHEAMEQQTISIAKAGITTILNSRTSVLAAANPIFGRYDDMKTPGE 494
Query: 266 DRCITIKSTAISMFFELEEKDLVFITNPDQREKSEKGFLINLIDSPGHVDFSSEVTA 436
+ I +ST +S F D++FI + E ++ ++I+ ++ SSE A
Sbjct: 495 N--IDFQSTILSRF------DMIFIVKDEHDETKDRNIARHVINLHTNLQESSETLA 543
>SPBC1271.15c |||translation initiation factor
IF-2Mt|Schizosaccharomyces pombe|chr 2|||Manual
Length = 686
Score = 29.9 bits (64), Expect = 0.45
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Frame = +2
Query: 137 MSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETR----FTDTRKDEQDRCITIKSTAISM 304
++++ HVDHGK+TL D+ K+ I + G T+ FT D+ + IT T M
Sbjct: 174 VTLMGHVDHGKTTLLDAF-RKSTIASTEHGGITQKIGAFT-VPFDKGSKFITFLDTPGHM 231
Query: 305 FFELEEK 325
FE K
Sbjct: 232 AFEAMRK 238
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 27.9 bits (59), Expect = 1.8
Identities = 26/92 (28%), Positives = 39/92 (42%)
Frame = +2
Query: 134 NMSVIAHVDHGKSTLTDSLVSKAGIIAGARAGETRFTDTRKDEQDRCITIKSTAISMFFE 313
N+ I HVD GKSTL +++ G++ R E + E + S A+ E
Sbjct: 240 NIVFIGHVDAGKSTLGGNILFLTGMV-DKRTMEK--IEREAKEAGKESWYLSWALDSTSE 296
Query: 314 LEEKDLVFITNPDQREKSEKGFLINLIDSPGH 409
EK E + F +L+D+PGH
Sbjct: 297 EREKGKTVEVGRAYFETEHRRF--SLLDAPGH 326
>SPAC589.12 ||SPAC688.01|glycosylceramide biosynthesis protein
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 971
Score = 27.9 bits (59), Expect = 1.8
Identities = 17/45 (37%), Positives = 23/45 (51%)
Frame = +3
Query: 471 LTVCLVCVYKLKQYCVRLLPSASSLFCS*TKWTVLFLSSNLKLKN 605
L V + YKL+ RL +A S+ C WT LF SN+ +N
Sbjct: 348 LNVIGIAAYKLEDPVHRLFVTAFSVCCECLAWTSLF--SNISPEN 390
>SPAC19G12.16c |adg2|SPAC23A1.01c, mug46|conserved fungal
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.5 bits (58), Expect = 2.4
Identities = 19/75 (25%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Frame = -1
Query: 510 TVSVCTHTPD-TQSTTTRDPSVTRSAAVTSEEKSTCPGESIKLIKKPFSLFSRWSGFVMN 334
T + C+ P+ T ST + +V+ S + ++ ST P ++ + S S V +
Sbjct: 575 TTTTCSSRPEETISTVSTTSTVSESGSSSASITSTYPSSTLSMTTSHLS-----SSSVHS 629
Query: 333 TKSFSSSSKNIEMAV 289
+ + SSSS++ M++
Sbjct: 630 SSAHSSSSRSSSMSL 644
>SPBC29A10.12 |||HMG-box variant|Schizosaccharomyces pombe|chr
2|||Manual
Length = 207
Score = 27.1 bits (57), Expect = 3.2
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 1/60 (1%)
Frame = -1
Query: 423 EEKSTCPGESIKLIKKPFSLFSRWSGFVMNTKSFSS-SSKNIEMAVDLMVMQRSCSSLRV 247
EE + P + K KK S F+ T +S S++NI+ A+DL+ + S S ++
Sbjct: 66 EEMESLPSKGGKGSKKAAKKNSSLDAFLNETPQTASYSARNIDDALDLLSLNNSSSKDKI 125
>SPAC3H1.14 ||SPAC9G1.01|cytoplasmic vesicle protein, Vid24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 195
Score = 25.8 bits (54), Expect = 7.4
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = -3
Query: 130 DIPLLVHHPTDLVYREIHHFRWFMIFVLLNQLPYASNGVRF 8
DIPL + P D + RE + RW + +L + Y ++ F
Sbjct: 102 DIPLRLIQPYDPLSRETVYMRWKELAMLDKTVDYQNHNQSF 142
>SPAC25G10.02 |cce1|ydc2|mitochondrial cruciform cutting
endonuclease Cce1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 258
Score = 25.8 bits (54), Expect = 7.4
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
Frame = -1
Query: 375 PFSLFSRWSGFVMNTK-SFSSSSKNIEMAVDLMVMQR 268
P S +S W+ V+NTK SFS ++M +L+ Q+
Sbjct: 168 PKSTYSYWAS-VLNTKASFSKKKSRVQMVKELIDGQK 203
>SPBC19F5.03 |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 598
Score = 25.4 bits (53), Expect = 9.7
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = -3
Query: 130 DIPLLVHHPTDLVYREIHHFRWFMIFVLLNQL 35
D P + +H D ++E H RW + +LLN++
Sbjct: 318 DNPHIHYHYFDF-HKECSHMRWDRVSLLLNEI 348
>SPCC1235.05c |fft2||fun thirty related protein
Fft2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 1284
Score = 25.4 bits (53), Expect = 9.7
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = -2
Query: 125 SASCPSSHGSRLP*NSPF*MVYDFCSIK 42
+ASCP SH L + PF + + C IK
Sbjct: 417 TASCPLSHSKLLLEHRPFQTLAEACIIK 444
>SPAP14E8.02 |||transcription factor |Schizosaccharomyces pombe|chr
1|||Manual
Length = 566
Score = 25.4 bits (53), Expect = 9.7
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 159 ITASQPSRTRWFPR-PVSLLVREPERPVSLTRVRTNK 266
+T S T + P P S + REP P+S R+R+++
Sbjct: 48 LTPEPSSNTFYAPSSPASAVRREPLSPMSFVRMRSHR 84
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,962,159
Number of Sequences: 5004
Number of extensions: 58782
Number of successful extensions: 188
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 174
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 181
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 398435810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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