Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_M05
(847 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D80007-1|BAA11502.1| 1884|Homo sapiens KIAA0185 protein. 85 4e-16
BC111040-1|AAI11041.1| 1444|Homo sapiens PDCD11 protein protein. 85 4e-16
BC080560-1|AAH80560.1| 1434|Homo sapiens PDCD11 protein protein. 85 4e-16
BC064486-1|AAH64486.1| 1434|Homo sapiens PDCD11 protein protein. 85 4e-16
BC049838-1|AAH49838.1| 1436|Homo sapiens PDCD11 protein protein. 85 4e-16
AL603983-1|CAI15102.1| 1871|Homo sapiens programmed cell death 1... 85 4e-16
AL591408-6|CAI16749.1| 1871|Homo sapiens programmed cell death 1... 85 4e-16
AL139339-5|CAH71487.1| 1871|Homo sapiens programmed cell death 1... 85 4e-16
AY376900-1|AAQ85126.1| 516|Homo sapiens GTP-GDP dissociation st... 32 3.0
>D80007-1|BAA11502.1| 1884|Homo sapiens KIAA0185 protein.
Length = 1884
Score = 84.6 bits (200), Expect = 4e-16
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Frame = +3
Query: 135 MADAEEYFPRGGK----KPTGAHFKQS---GNFLGVXXXXXXXXXXXXXXSEGDDGYLSD 293
MA+ EE FPRGG KP A F+QS N + L
Sbjct: 14 MANLEESFPRGGTRKIHKPEKA-FQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKI 72
Query: 294 EAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISE 473
E ++ K+ + LS +SL G+ +LG V V+++++ +S+P L G V I +
Sbjct: 73 EKRESSKSAR--EKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICD 130
Query: 474 SYNKLLEAYV--EDKTEKVRELSQMFKPGQYI-----AVSVVELAPGNTMLTTMPQHVNS 632
+Y K L V E + + L ++F PG + ++ + + + L+ P++VN
Sbjct: 131 AYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNR 190
Query: 633 GKRHTEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLP 749
+K G + VSS+EDHGY++D+G+ T AFLP
Sbjct: 191 VLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLP 229
Score = 36.3 bits (80), Expect = 0.14
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Frame = +3
Query: 360 LRPGINLLGRVIHVSDVK-IKVSMPCKLLGNVMACHISESYNKL-LEAYVEDKTEKVREL 533
L G +GRV+ V+ + + VS P +G V H+S+SY++ LE +V K + L
Sbjct: 1240 LEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYSETPLEDFVPQKVVRCYIL 1299
Query: 534 SQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVM 713
S +++ P P+ +NS + +IK+G + + V S++ HG
Sbjct: 1300 STADNV-LTLSLRSSRTNPETKSKVEDPE-INSIQ---DIKEGQLLRGYVGSIQPHGVFF 1354
Query: 714 DLG 722
LG
Sbjct: 1355 RLG 1357
>BC111040-1|AAI11041.1| 1444|Homo sapiens PDCD11 protein protein.
Length = 1444
Score = 84.6 bits (200), Expect = 4e-16
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Frame = +3
Query: 135 MADAEEYFPRGGK----KPTGAHFKQS---GNFLGVXXXXXXXXXXXXXXSEGDDGYLSD 293
MA+ EE FPRGG KP A F+QS N + L
Sbjct: 1 MANLEESFPRGGTRKIHKPEKA-FQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKI 59
Query: 294 EAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISE 473
E ++ K+ + LS +SL G+ +LG V V+++++ +S+P L G V I +
Sbjct: 60 EKRESSKSAR--EKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICD 117
Query: 474 SYNKLLEAYV--EDKTEKVRELSQMFKPGQYI-----AVSVVELAPGNTMLTTMPQHVNS 632
+Y K L V E + + L ++F PG + ++ + + + L+ P++VN
Sbjct: 118 AYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNR 177
Query: 633 GKRHTEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLP 749
+K G + VSS+EDHGY++D+G+ T AFLP
Sbjct: 178 VLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLP 216
Score = 36.3 bits (80), Expect = 0.14
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Frame = +3
Query: 360 LRPGINLLGRVIHVSDVK-IKVSMPCKLLGNVMACHISESYNKL-LEAYVEDKTEKVREL 533
L G +GRV+ V+ + + VS P +G V H+S+SY++ LE +V K + L
Sbjct: 1227 LEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYSETPLEDFVPQKVVRCYIL 1286
Query: 534 SQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVM 713
S +++ P P+ +NS + +IK+G + + V S++ HG
Sbjct: 1287 STADNV-LTLSLRSSRTNPETKSKVEDPE-INSIQ---DIKEGQLLRGYVGSIQPHGVFF 1341
Query: 714 DLG 722
LG
Sbjct: 1342 RLG 1344
>BC080560-1|AAH80560.1| 1434|Homo sapiens PDCD11 protein protein.
Length = 1434
Score = 84.6 bits (200), Expect = 4e-16
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Frame = +3
Query: 135 MADAEEYFPRGGK----KPTGAHFKQS---GNFLGVXXXXXXXXXXXXXXSEGDDGYLSD 293
MA+ EE FPRGG KP A F+QS N + L
Sbjct: 1 MANLEESFPRGGTRKIHKPEKA-FQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKI 59
Query: 294 EAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISE 473
E ++ K+ + LS +SL G+ +LG V V+++++ +S+P L G V I +
Sbjct: 60 EKRESSKSAR--EKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICD 117
Query: 474 SYNKLLEAYV--EDKTEKVRELSQMFKPGQYI-----AVSVVELAPGNTMLTTMPQHVNS 632
+Y K L V E + + L ++F PG + ++ + + + L+ P++VN
Sbjct: 118 AYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNR 177
Query: 633 GKRHTEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLP 749
+K G + VSS+EDHGY++D+G+ T AFLP
Sbjct: 178 VLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLP 216
Score = 36.3 bits (80), Expect = 0.14
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Frame = +3
Query: 360 LRPGINLLGRVIHVSDVK-IKVSMPCKLLGNVMACHISESYNKL-LEAYVEDKTEKVREL 533
L G +GRV+ V+ + + VS P +G V H+S+SY++ LE +V K + L
Sbjct: 1227 LEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYSETPLEDFVPQKVVRCYIL 1286
Query: 534 SQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVM 713
S +++ P P+ +NS + +IK+G + + V S++ HG
Sbjct: 1287 STADNV-LTLSLRSSRTNPETKSKVEDPE-INSIQ---DIKEGQLLRGYVGSIQPHGVFF 1341
Query: 714 DLG 722
LG
Sbjct: 1342 RLG 1344
>BC064486-1|AAH64486.1| 1434|Homo sapiens PDCD11 protein protein.
Length = 1434
Score = 84.6 bits (200), Expect = 4e-16
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Frame = +3
Query: 135 MADAEEYFPRGGK----KPTGAHFKQS---GNFLGVXXXXXXXXXXXXXXSEGDDGYLSD 293
MA+ EE FPRGG KP A F+QS N + L
Sbjct: 1 MANLEESFPRGGTRKIHKPEKA-FQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKI 59
Query: 294 EAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISE 473
E ++ K+ + LS +SL G+ +LG V V+++++ +S+P L G V I +
Sbjct: 60 EKRESSKSAR--EKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICD 117
Query: 474 SYNKLLEAYV--EDKTEKVRELSQMFKPGQYI-----AVSVVELAPGNTMLTTMPQHVNS 632
+Y K L V E + + L ++F PG + ++ + + + L+ P++VN
Sbjct: 118 AYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNR 177
Query: 633 GKRHTEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLP 749
+K G + VSS+EDHGY++D+G+ T AFLP
Sbjct: 178 VLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLP 216
Score = 36.3 bits (80), Expect = 0.14
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Frame = +3
Query: 360 LRPGINLLGRVIHVSDVK-IKVSMPCKLLGNVMACHISESYNKL-LEAYVEDKTEKVREL 533
L G +GRV+ V+ + + VS P +G V H+S+SY++ LE +V K + L
Sbjct: 1227 LEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYSETPLEDFVPQKVVRCYIL 1286
Query: 534 SQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVM 713
S +++ P P+ +NS + +IK+G + + V S++ HG
Sbjct: 1287 STADNV-LTLSLRSSRTNPETKSKVEDPE-INSIQ---DIKEGQLLRGYVGSIQPHGVFF 1341
Query: 714 DLG 722
LG
Sbjct: 1342 RLG 1344
>BC049838-1|AAH49838.1| 1436|Homo sapiens PDCD11 protein protein.
Length = 1436
Score = 84.6 bits (200), Expect = 4e-16
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Frame = +3
Query: 135 MADAEEYFPRGGK----KPTGAHFKQS---GNFLGVXXXXXXXXXXXXXXSEGDDGYLSD 293
MA+ EE FPRGG KP A F+QS N + L
Sbjct: 1 MANLEESFPRGGTRKIHKPEKA-FQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKI 59
Query: 294 EAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISE 473
E ++ K+ + LS +SL G+ +LG V V+++++ +S+P L G V I +
Sbjct: 60 EKRESSKSAR--EKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICD 117
Query: 474 SYNKLLEAYV--EDKTEKVRELSQMFKPGQYI-----AVSVVELAPGNTMLTTMPQHVNS 632
+Y K L V E + + L ++F PG + ++ + + + L+ P++VN
Sbjct: 118 AYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNR 177
Query: 633 GKRHTEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLP 749
+K G + VSS+EDHGY++D+G+ T AFLP
Sbjct: 178 VLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLP 216
Score = 36.3 bits (80), Expect = 0.14
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Frame = +3
Query: 360 LRPGINLLGRVIHVSDVK-IKVSMPCKLLGNVMACHISESYNKL-LEAYVEDKTEKVREL 533
L G +GRV+ V+ + + VS P +G V H+S+SY++ LE +V K + L
Sbjct: 1227 LEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYSETPLEDFVPQKVVRCYIL 1286
Query: 534 SQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVM 713
S +++ P P+ +NS + +IK+G + + V S++ HG
Sbjct: 1287 STADNV-LTLSLRSSRTNPETKSKVEDPE-INSIQ---DIKEGQLLRGYVGSIQPHGVFF 1341
Query: 714 DLG 722
LG
Sbjct: 1342 RLG 1344
>AL603983-1|CAI15102.1| 1871|Homo sapiens programmed cell death 11
protein.
Length = 1871
Score = 84.6 bits (200), Expect = 4e-16
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Frame = +3
Query: 135 MADAEEYFPRGGK----KPTGAHFKQS---GNFLGVXXXXXXXXXXXXXXSEGDDGYLSD 293
MA+ EE FPRGG KP A F+QS N + L
Sbjct: 1 MANLEESFPRGGTRKIHKPEKA-FQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKI 59
Query: 294 EAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISE 473
E ++ K+ + LS +SL G+ +LG V V+++++ +S+P L G V I +
Sbjct: 60 EKRESSKSAR--EKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICD 117
Query: 474 SYNKLLEAYV--EDKTEKVRELSQMFKPGQYI-----AVSVVELAPGNTMLTTMPQHVNS 632
+Y K L V E + + L ++F PG + ++ + + + L+ P++VN
Sbjct: 118 AYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNR 177
Query: 633 GKRHTEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLP 749
+K G + VSS+EDHGY++D+G+ T AFLP
Sbjct: 178 VLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLP 216
Score = 36.3 bits (80), Expect = 0.14
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Frame = +3
Query: 360 LRPGINLLGRVIHVSDVK-IKVSMPCKLLGNVMACHISESYNKL-LEAYVEDKTEKVREL 533
L G +GRV+ V+ + + VS P +G V H+S+SY++ LE +V K + L
Sbjct: 1227 LEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYSETPLEDFVPQKVVRCYIL 1286
Query: 534 SQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVM 713
S +++ P P+ +NS + +IK+G + + V S++ HG
Sbjct: 1287 STADNV-LTLSLRSSRTNPETKSKVEDPE-INSIQ---DIKEGQLLRGYVGSIQPHGVFF 1341
Query: 714 DLG 722
LG
Sbjct: 1342 RLG 1344
>AL591408-6|CAI16749.1| 1871|Homo sapiens programmed cell death 11
protein.
Length = 1871
Score = 84.6 bits (200), Expect = 4e-16
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Frame = +3
Query: 135 MADAEEYFPRGGK----KPTGAHFKQS---GNFLGVXXXXXXXXXXXXXXSEGDDGYLSD 293
MA+ EE FPRGG KP A F+QS N + L
Sbjct: 1 MANLEESFPRGGTRKIHKPEKA-FQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKI 59
Query: 294 EAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISE 473
E ++ K+ + LS +SL G+ +LG V V+++++ +S+P L G V I +
Sbjct: 60 EKRESSKSAR--EKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICD 117
Query: 474 SYNKLLEAYV--EDKTEKVRELSQMFKPGQYI-----AVSVVELAPGNTMLTTMPQHVNS 632
+Y K L V E + + L ++F PG + ++ + + + L+ P++VN
Sbjct: 118 AYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNR 177
Query: 633 GKRHTEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLP 749
+K G + VSS+EDHGY++D+G+ T AFLP
Sbjct: 178 VLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLP 216
Score = 36.3 bits (80), Expect = 0.14
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Frame = +3
Query: 360 LRPGINLLGRVIHVSDVK-IKVSMPCKLLGNVMACHISESYNKL-LEAYVEDKTEKVREL 533
L G +GRV+ V+ + + VS P +G V H+S+SY++ LE +V K + L
Sbjct: 1227 LEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYSETPLEDFVPQKVVRCYIL 1286
Query: 534 SQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVM 713
S +++ P P+ +NS + +IK+G + + V S++ HG
Sbjct: 1287 STADNV-LTLSLRSSRTNPETKSKVEDPE-INSIQ---DIKEGQLLRGYVGSIQPHGVFF 1341
Query: 714 DLG 722
LG
Sbjct: 1342 RLG 1344
>AL139339-5|CAH71487.1| 1871|Homo sapiens programmed cell death 11
protein.
Length = 1871
Score = 84.6 bits (200), Expect = 4e-16
Identities = 64/219 (29%), Positives = 103/219 (47%), Gaps = 14/219 (6%)
Frame = +3
Query: 135 MADAEEYFPRGGK----KPTGAHFKQS---GNFLGVXXXXXXXXXXXXXXSEGDDGYLSD 293
MA+ EE FPRGG KP A F+QS N + L
Sbjct: 1 MANLEESFPRGGTRKIHKPEKA-FQQSVEQDNLFDISTEEGSTKRKKSQKGPAKTKKLKI 59
Query: 294 EAQDYLKTHKLNNNLIFLSSKSLRPGINLLGRVIHVSDVKIKVSMPCKLLGNVMACHISE 473
E ++ K+ + LS +SL G+ +LG V V+++++ +S+P L G V I +
Sbjct: 60 EKRESSKSAR--EKFEILSVESLCEGMRILGCVKEVNELELVISLPNGLQGFVQVTEICD 117
Query: 474 SYNKLLEAYV--EDKTEKVRELSQMFKPGQYI-----AVSVVELAPGNTMLTTMPQHVNS 632
+Y K L V E + + L ++F PG + ++ + + + L+ P++VN
Sbjct: 118 AYTKKLNEQVTQEQPLKDLLHLPELFSPGMLVRCVVSSLGITDRGKKSVKLSLNPKNVNR 177
Query: 633 GKRHTEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLP 749
+K G + VSS+EDHGY++D+G+ T AFLP
Sbjct: 178 VLSAEALKPGMLLTGTVSSLEDHGYLVDIGVDGTRAFLP 216
Score = 36.3 bits (80), Expect = 0.14
Identities = 34/123 (27%), Positives = 58/123 (47%), Gaps = 2/123 (1%)
Frame = +3
Query: 360 LRPGINLLGRVIHVSDVK-IKVSMPCKLLGNVMACHISESYNKL-LEAYVEDKTEKVREL 533
L G +GRV+ V+ + + VS P +G V H+S+SY++ LE +V K + L
Sbjct: 1227 LEEGEVAMGRVVKVTPNEGLTVSFPFGKIGTVSIFHMSDSYSETPLEDFVPQKVVRCYIL 1286
Query: 534 SQMFKPGQYIAVSVVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVM 713
S +++ P P+ +NS + +IK+G + + V S++ HG
Sbjct: 1287 STADNV-LTLSLRSSRTNPETKSKVEDPE-INSIQ---DIKEGQLLRGYVGSIQPHGVFF 1341
Query: 714 DLG 722
LG
Sbjct: 1342 RLG 1344
>AY376900-1|AAQ85126.1| 516|Homo sapiens GTP-GDP dissociation
stimulator 1 isoform A protein.
Length = 516
Score = 31.9 bits (69), Expect = 3.0
Identities = 19/74 (25%), Positives = 36/74 (48%)
Frame = +3
Query: 573 VVELAPGNTMLTTMPQHVNSGKRHTEIKKGAIFQAAVSSVEDHGYVMDLGIPNTTAFLPK 752
+ EL G+ ++ + S ++ E KG++FQ +S + + + + L TA +
Sbjct: 195 ITELKTGSDLMVLLLLGDESMQKLFEGGKGSVFQRVLSWIPSNNHQLQLAGALATANFAR 254
Query: 753 KDANXEINLDTGMV 794
DAN +D G+V
Sbjct: 255 NDANCIHMVDNGIV 268
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 108,772,067
Number of Sequences: 237096
Number of extensions: 2217437
Number of successful extensions: 7747
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 7487
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7731
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10705443456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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