Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_L22
(852 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical pr... 175 4e-44
Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical pr... 175 4e-44
U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin pr... 113 2e-25
U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family ... 113 2e-25
Z32680-3|CAA83598.1| 317|Caenorhabditis elegans Hypothetical pr... 93 3e-19
U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family... 71 1e-12
Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical pr... 29 5.5
Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical pr... 28 9.7
U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homolog... 28 9.7
U40799-3|AAA81481.1| 323|Caenorhabditis elegans Hypothetical pr... 28 9.7
AL032639-7|CAA21631.2| 465|Caenorhabditis elegans Hypothetical ... 28 9.7
AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin pro... 28 9.7
>Z29443-8|CAE45742.1| 455|Caenorhabditis elegans Hypothetical
protein T07C4.9b protein.
Length = 455
Score = 175 bits (425), Expect = 4e-44
Identities = 90/209 (43%), Positives = 124/209 (59%)
Frame = +3
Query: 99 TPTVYXXXXXXXXXXXXTLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDL 278
TP+V+ LRKAMKG G + +I +LC+R QR EI++ FK YGKDL
Sbjct: 140 TPSVFPVQGFNSNADAEVLRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKDL 199
Query: 279 ISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTI 458
I ELK EL G+ E++I+ALM + AK+LH A+ G+GT E +IEI+ + +N I+ +
Sbjct: 200 IKELKGELHGDFEDLILALMDAPAIYDAKQLHRAMEGLGTKESVLIEIMTSRTNAQIQQV 259
Query: 459 SAFYEQLYGKSLESDLKGDMSGHFKRLCVSLCMANRDENQGIDXXXXXXXXXXXXXXXXX 638
Y+ L+ K LE DL G+ SGHFKRL VSLC RDE+ D
Sbjct: 260 RDAYKMLFKKDLERDLIGETSGHFKRLLVSLCAGGRDESSQTDGLRANQDARRLLQAGEK 319
Query: 639 QWGTDESIFNSILITRSYQQLRQIFAEYE 725
+ GTDES FN+IL ++++ QLR +F EY+
Sbjct: 320 RLGTDESTFNAILASQNFSQLRLVFEEYQ 348
Score = 73.7 bits (173), Expect = 1e-13
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Frame = +3
Query: 153 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLEN---V 323
L+ K GTDE +L + Q + E ++ + ++ E +G++ +
Sbjct: 314 LQAGEKRLGTDESTFNAILASQNFSQLRLVFEEYQKASNHSIEKAIEFEFSGDIRDGLLA 373
Query: 324 IVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESD 503
++A++ P ++AK LHD++ G+GT + +I + T + Y + I ++ LY SLE+
Sbjct: 374 VIAVIRNRPAYFAKLLHDSMKGLGTRDNDLIRLCVTRAEYDMGDIRNMFQSLYRTSLENM 433
Query: 504 LKGDMSGHFKRLCVSLCMANR 566
+KGD SG +K ++L NR
Sbjct: 434 IKGDCSGAYKEGLIALVNGNR 454
>Z29443-7|CAA82571.2| 497|Caenorhabditis elegans Hypothetical
protein T07C4.9a protein.
Length = 497
Score = 175 bits (425), Expect = 4e-44
Identities = 90/209 (43%), Positives = 124/209 (59%)
Frame = +3
Query: 99 TPTVYXXXXXXXXXXXXTLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDL 278
TP+V+ LRKAMKG G + +I +LC+R QR EI++ FK YGKDL
Sbjct: 182 TPSVFPVQGFNSNADAEVLRKAMKGLGCNNSKVISILCQRTNWQRQEISKAFKVMYGKDL 241
Query: 279 ISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTI 458
I ELK EL G+ E++I+ALM + AK+LH A+ G+GT E +IEI+ + +N I+ +
Sbjct: 242 IKELKGELHGDFEDLILALMDAPAIYDAKQLHRAMEGLGTKESVLIEIMTSRTNAQIQQV 301
Query: 459 SAFYEQLYGKSLESDLKGDMSGHFKRLCVSLCMANRDENQGIDXXXXXXXXXXXXXXXXX 638
Y+ L+ K LE DL G+ SGHFKRL VSLC RDE+ D
Sbjct: 302 RDAYKMLFKKDLERDLIGETSGHFKRLLVSLCAGGRDESSQTDGLRANQDARRLLQAGEK 361
Query: 639 QWGTDESIFNSILITRSYQQLRQIFAEYE 725
+ GTDES FN+IL ++++ QLR +F EY+
Sbjct: 362 RLGTDESTFNAILASQNFSQLRLVFEEYQ 390
Score = 73.7 bits (173), Expect = 1e-13
Identities = 39/141 (27%), Positives = 73/141 (51%), Gaps = 3/141 (2%)
Frame = +3
Query: 153 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLEN---V 323
L+ K GTDE +L + Q + E ++ + ++ E +G++ +
Sbjct: 356 LQAGEKRLGTDESTFNAILASQNFSQLRLVFEEYQKASNHSIEKAIEFEFSGDIRDGLLA 415
Query: 324 IVALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESD 503
++A++ P ++AK LHD++ G+GT + +I + T + Y + I ++ LY SLE+
Sbjct: 416 VIAVIRNRPAYFAKLLHDSMKGLGTRDNDLIRLCVTRAEYDMGDIRNMFQSLYRTSLENM 475
Query: 504 LKGDMSGHFKRLCVSLCMANR 566
+KGD SG +K ++L NR
Sbjct: 476 IKGDCSGAYKEGLIALVNGNR 496
>U40483-1|AAA99775.1| 322|Caenorhabditis elegans NEX1 annexin
protein.
Length = 322
Score = 113 bits (272), Expect = 2e-25
Identities = 65/183 (35%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Frame = +3
Query: 183 DEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALM-TPLPHFY 359
++ A+++V+ QR ++ E +K YGKD+I L + +G+LE I ALM TPL +
Sbjct: 31 EKDAVVNVITSISNAQRQQLREPYKLKYGKDIIQALDKKFSGDLEKAIFALMETPLD-YD 89
Query: 360 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDMSGHFKRL 539
K+L A+ G+GTDE +IEILC+ + +R I YE+ YGK+LE+D+ GD SG F+ L
Sbjct: 90 VKQLKAAMKGLGTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRDL 149
Query: 540 CVSLCMANRDENQGIDXXXXXXXXXXXXXXXXXQWG-TDESIFNSILITRSYQQLRQIFA 716
VSL ++D + + + D + F IL T++ QLR++FA
Sbjct: 150 LVSLVTGSKDGSHDTNDAQAKDDAVRLFADGKAKLAKKDGTHFLHILATQNQYQLRKVFA 209
Query: 717 EYE 725
++
Sbjct: 210 YFQ 212
Score = 69.7 bits (163), Expect = 2e-12
Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Frame = +3
Query: 153 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 332
L+ AMKG GTDE +I++LC R + Q I T++ YGK L +++ + +G +++V+
Sbjct: 93 LKAAMKGLGTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRDLLVS 152
Query: 333 LMTPLPHFY-----AKELHDAVSGIG--------TDEEAIIEILCTLSNYGIRTISAFYE 473
L+T A+ DAV D + IL T + Y +R + A+++
Sbjct: 153 LVTGSKDGSHDTNDAQAKDDAVRLFADGKAKLAKKDGTHFLHILATQNQYQLRKVFAYFQ 212
Query: 474 QLYGKSLESDLKGDMSGHFKRLCVSLCMANRDENQ 578
+L G S+E ++ + SG ++ +++ A D+ +
Sbjct: 213 ELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDKQK 247
Score = 63.7 bits (148), Expect = 2e-10
Identities = 34/130 (26%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Frame = +3
Query: 183 DEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLEN---VIVALMTPLPH 353
D + +L + Q ++ F+ G + ++ E +G+L+ IV +
Sbjct: 188 DGTHFLHILATQNQYQLRKVFAYFQELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDKQK 247
Query: 354 FYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDMSGHFK 533
F+A++LH ++ G+GT + +I ++ T S + I A +++LY KSL +KGD SG ++
Sbjct: 248 FFAQQLHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYR 307
Query: 534 RLCVSLCMAN 563
+S+ N
Sbjct: 308 DALLSIINGN 317
Score = 33.1 bits (72), Expect = 0.26
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 153 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 332
L +MKG GT + +I V+ R V I F+ Y K L +K + +G + +++
Sbjct: 253 LHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYRDALLS 312
Query: 333 LM 338
++
Sbjct: 313 II 314
>U00064-7|AAB52702.1| 322|Caenorhabditis elegans Annexin family
protein 1 protein.
Length = 322
Score = 113 bits (272), Expect = 2e-25
Identities = 65/183 (35%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
Frame = +3
Query: 183 DEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVALM-TPLPHFY 359
++ A+++V+ QR ++ E +K YGKD+I L + +G+LE I ALM TPL +
Sbjct: 31 EKDAVVNVITSISNAQRQQLREPYKLKYGKDIIQALDKKFSGDLEKAIFALMETPLD-YD 89
Query: 360 AKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDMSGHFKRL 539
K+L A+ G+GTDE +IEILC+ + +R I YE+ YGK+LE+D+ GD SG F+ L
Sbjct: 90 VKQLKAAMKGLGTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRDL 149
Query: 540 CVSLCMANRDENQGIDXXXXXXXXXXXXXXXXXQWG-TDESIFNSILITRSYQQLRQIFA 716
VSL ++D + + + D + F IL T++ QLR++FA
Sbjct: 150 LVSLVTGSKDGSHDTNDAQAKDDAVRLFADGKAKLAKKDGTHFLHILATQNQYQLRKVFA 209
Query: 717 EYE 725
++
Sbjct: 210 YFQ 212
Score = 69.7 bits (163), Expect = 2e-12
Identities = 43/155 (27%), Positives = 80/155 (51%), Gaps = 13/155 (8%)
Frame = +3
Query: 153 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 332
L+ AMKG GTDE +I++LC R + Q I T++ YGK L +++ + +G +++V+
Sbjct: 93 LKAAMKGLGTDEAVLIEILCSRTVDQLRAIRVTYEKEYGKALEADIAGDTSGEFRDLLVS 152
Query: 333 LMTPLPHFY-----AKELHDAVSGIG--------TDEEAIIEILCTLSNYGIRTISAFYE 473
L+T A+ DAV D + IL T + Y +R + A+++
Sbjct: 153 LVTGSKDGSHDTNDAQAKDDAVRLFADGKAKLAKKDGTHFLHILATQNQYQLRKVFAYFQ 212
Query: 474 QLYGKSLESDLKGDMSGHFKRLCVSLCMANRDENQ 578
+L G S+E ++ + SG ++ +++ A D+ +
Sbjct: 213 ELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDKQK 247
Score = 63.7 bits (148), Expect = 2e-10
Identities = 34/130 (26%), Positives = 66/130 (50%), Gaps = 3/130 (2%)
Frame = +3
Query: 183 DEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLEN---VIVALMTPLPH 353
D + +L + Q ++ F+ G + ++ E +G+L+ IV +
Sbjct: 188 DGTHFLHILATQNQYQLRKVFAYFQELAGGSIEKSIEKEFSGDLQKSYLTIVRAASDKQK 247
Query: 354 FYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDMSGHFK 533
F+A++LH ++ G+GT + +I ++ T S + I A +++LY KSL +KGD SG ++
Sbjct: 248 FFAQQLHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYR 307
Query: 534 RLCVSLCMAN 563
+S+ N
Sbjct: 308 DALLSIINGN 317
Score = 33.1 bits (72), Expect = 0.26
Identities = 17/62 (27%), Positives = 31/62 (50%)
Frame = +3
Query: 153 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 332
L +MKG GT + +I V+ R V I F+ Y K L +K + +G + +++
Sbjct: 253 LHASMKGLGTRDNDLIRVIVTRSEVDLELIKAEFQELYSKSLADTVKGDTSGAYRDALLS 312
Query: 333 LM 338
++
Sbjct: 313 II 314
>Z32680-3|CAA83598.1| 317|Caenorhabditis elegans Hypothetical
protein C28A5.3 protein.
Length = 317
Score = 92.7 bits (220), Expect = 3e-19
Identities = 51/140 (36%), Positives = 77/140 (55%)
Frame = +3
Query: 153 LRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIVA 332
L KA++ ++ I+++L QR I +KT YGKDL E+K +G+ E+ +VA
Sbjct: 21 LEKALRN--KEKLKILEILVSVNNTQRQMIRTPYKTRYGKDLEDEIKKAFSGDFEDFLVA 78
Query: 333 LMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKG 512
L+ EL+ +V G+GT+E+ +IEIL T +N I Y Y KSLE +
Sbjct: 79 LLQTPTKLDVTELNRSVKGLGTNEKNLIEILTTRTNEEIEAAKNTYFMTYSKSLEDAISA 138
Query: 513 DMSGHFKRLCVSLCMANRDE 572
D SG F+RL + + A R+E
Sbjct: 139 DTSGDFRRLLIVILQAKREE 158
Score = 49.6 bits (113), Expect = 3e-06
Identities = 25/102 (24%), Positives = 54/102 (52%), Gaps = 3/102 (2%)
Frame = +3
Query: 237 EIAETFKTNYGKDLISELKSELTGNLENVIVALMTPL---PHFYAKELHDAVSGIGTDEE 407
++ E + GK+ + EL+G+ +N++++L+ P ++A +H A G+GT ++
Sbjct: 203 KVIEEVERQSGKEFQKLIDKELSGDFKNLVLSLIETSRNKPRYFANSIHLATKGMGTRDK 262
Query: 408 AIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDMSGHFK 533
+I IL + S + I ++ L+GK L +K + ++
Sbjct: 263 DLIRILVSRSENDLVIIEHEFQTLFGKPLTQLIKEECKAEYR 304
Score = 32.7 bits (71), Expect = 0.34
Identities = 19/67 (28%), Positives = 31/67 (46%)
Frame = +3
Query: 150 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 329
++ A KG GT +K +I +L R + I F+T +GK L +K E + +
Sbjct: 249 SIHLATKGMGTRDKDLIRILVSRSENDLVIIEHEFQTLFGKPLTQLIKEECKAEYRDGLT 308
Query: 330 ALMTPLP 350
L+ P
Sbjct: 309 MLVKGNP 315
>U88315-15|AAB42365.1| 351|Caenorhabditis elegans Annexin family
protein 4 protein.
Length = 351
Score = 70.9 bits (166), Expect = 1e-12
Identities = 42/145 (28%), Positives = 72/145 (49%)
Frame = +3
Query: 150 TLRKAMKGFGTDEKAIIDVLCRRGIVQRLEIAETFKTNYGKDLISELKSELTGNLENVIV 329
TLR ++ G T ++ II+ + QR +I ++ Y + L+ +L+ E G +
Sbjct: 33 TLRSSLHGLETKDQTIINTVLYHNNFQRQKILGAYEDMYSRKLLEDLEEECGGFFFEMCQ 92
Query: 330 ALMTPLPHFYAKELHDAVSGIGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLK 509
AL P P++ A+ ++ ++S D IEI CT S +R + Y+ Y KSL+ DL
Sbjct: 93 ALFKPAPNYDAQCVYKSLSNRHGDRSVAIEIACTRSPRQMRALRDTYQIDYRKSLDKDLT 152
Query: 510 GDMSGHFKRLCVSLCMANRDENQGI 584
+ G ++ L NR+E G+
Sbjct: 153 VKVEGVVGKMMHLLLCNNREEGLGV 177
>Z82268-4|CAB05199.1| 741|Caenorhabditis elegans Hypothetical
protein F52B11.3 protein.
Length = 741
Score = 28.7 bits (61), Expect = 5.5
Identities = 18/58 (31%), Positives = 27/58 (46%)
Frame = +3
Query: 390 IGTDEEAIIEILCTLSNYGIRTISAFYEQLYGKSLESDLKGDMSGHFKRLCVSLCMAN 563
+G D I + LS+ R +AF E+ G S+E ++ G C+SLC N
Sbjct: 286 VGKDYYEPICVAADLSSSTCRQQAAF-ERFIGSSIEGEVVASAQGVTISDCISLCFQN 342
>Z49969-3|CAA90267.1| 792|Caenorhabditis elegans Hypothetical
protein W01C9.3 protein.
Length = 792
Score = 27.9 bits (59), Expect = 9.7
Identities = 16/52 (30%), Positives = 22/52 (42%)
Frame = +1
Query: 619 WPPLVKVNGEPTNQSSTPSLSLAPISS*DRSSPSTKLLTGKDXEDSIKKEFS 774
W LV+V G+P Q P AP+S+ + T L G +FS
Sbjct: 50 WNNLVQVGGDPIVQKQPPPRPAAPMSTTFSVNSRTSSLMGLQQPTVFSTQFS 101
>U88314-13|ABR92611.1| 1346|Caenorhabditis elegans Formin homology
domain protein 1 protein.
Length = 1346
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +1
Query: 598 LKPMLKHWPPLVKVNGEPTNQSSTPSLSLAPISS*DRSSPSTKLLTGKDXEDSIKKE 768
+ P + W P V+ + +PT ++T + + I S ++ P+ L ++ E+ I KE
Sbjct: 566 VSPTVSSWQPPVREDIQPTTSTATNNNDIGSIRS--KNIPAPIQLVQENQENEIPKE 620
>U40799-3|AAA81481.1| 323|Caenorhabditis elegans Hypothetical
protein F42C5.5 protein.
Length = 323
Score = 27.9 bits (59), Expect = 9.7
Identities = 21/78 (26%), Positives = 36/78 (46%)
Frame = +3
Query: 243 AETFKTNYGKDLISELKSELTGNLENVIVALMTPLPHFYAKELHDAVSGIGTDEEAIIEI 422
A TF+T YG LIS+ ++ T N +++ + + + L + G +E E
Sbjct: 80 ANTFRTPYGNFLISQAPNDST-NADHLHLMWIYNVQTVVCLVLPEEAGGYFVPKEG--ET 136
Query: 423 LCTLSNYGIRTISAFYEQ 476
+ Y I+TI F E+
Sbjct: 137 FTSFQKYQIKTIGIFDEK 154
>AL032639-7|CAA21631.2| 465|Caenorhabditis elegans Hypothetical
protein Y38F1A.6 protein.
Length = 465
Score = 27.9 bits (59), Expect = 9.7
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 648 TDESIFNSILITRSYQQLRQIFAEYEAFD 734
TD+++ N+I + Q L+ + EYE FD
Sbjct: 77 TDKNVQNTIAFKNAEQALKMVNIEYEVFD 105
>AB084086-1|BAC67013.1| 1346|Caenorhabditis elegans Formactin
protein.
Length = 1346
Score = 27.9 bits (59), Expect = 9.7
Identities = 15/57 (26%), Positives = 30/57 (52%)
Frame = +1
Query: 598 LKPMLKHWPPLVKVNGEPTNQSSTPSLSLAPISS*DRSSPSTKLLTGKDXEDSIKKE 768
+ P + W P V+ + +PT ++T + + I S ++ P+ L ++ E+ I KE
Sbjct: 566 VSPTVSSWQPPVREDIQPTTSTATNNNDIGSIRS--KNIPAPIQLVQENQENEIPKE 620
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,768,341
Number of Sequences: 27780
Number of extensions: 332765
Number of successful extensions: 960
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 857
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 946
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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