BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_L16
(865 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical prot... 42 3e-05
DQ518577-1|ABF66619.1| 318|Anopheles gambiae putative secreted ... 25 2.2
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro... 25 3.9
AY146760-1|AAO12075.1| 313|Anopheles gambiae odorant-binding pr... 24 6.9
>AJ439060-16|CAD27767.1| 278|Anopheles gambiae hypothetical protein
protein.
Length = 278
Score = 41.5 bits (93), Expect = 3e-05
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 9/60 (15%)
Frame = +3
Query: 603 PYEVKVHVDKP-----YEVKVKV---PTPYTVEKKIPYEVKVPFPALHCRE-KGPVPVKY 755
PY ++V+V++P Y+V KV P PYTVEK P EV+ PFP ++ + PVP Y
Sbjct: 197 PYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPYPIEVEKPFPVEVLKKFEVPVPKPY 256
Score = 31.9 bits (69), Expect = 0.026
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Frame = +3
Query: 600 VPYEVKVHVDKPYEVKVKVPTPYTVEKKIPYEVKVP-FPALHCREKGPVPVKYEXRCP 770
VP+ V + V P+ VKV +P PY ++ + +K+P + + + PVP E P
Sbjct: 178 VPHPVPIAV--PHYVKVYIPQPYPLQVNVEQPIKIPIYKVIPKVIEKPVPYTVEKPYP 233
Score = 31.1 bits (67), Expect = 0.045
Identities = 13/30 (43%), Positives = 18/30 (60%)
Frame = +3
Query: 624 VDKPYEVKVKVPTPYTVEKKIPYEVKVPFP 713
V+KPY ++V+ P P V KK V P+P
Sbjct: 228 VEKPYPIEVEKPFPVEVLKKFEVPVPKPYP 257
Score = 25.8 bits (54), Expect = 1.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +3
Query: 624 VDKPYEVKVKVPTPYTVEKKIPYEVKVPFP 713
V P KV VP P+ V +P+ VKV P
Sbjct: 166 VPVPVFQKVGVPVPHPVPIAVPHYVKVYIP 195
>DQ518577-1|ABF66619.1| 318|Anopheles gambiae putative secreted
carbonic anhydrase protein.
Length = 318
Score = 25.4 bits (53), Expect = 2.2
Identities = 9/24 (37%), Positives = 14/24 (58%)
Frame = +2
Query: 389 AHQNC*GGKEGACSVYSRETRPLY 460
AHQ+C G + +++S PLY
Sbjct: 48 AHQSCAGAHQSPIAIHSHRAVPLY 71
>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 protein.
Length = 2051
Score = 24.6 bits (51), Expect = 3.9
Identities = 12/42 (28%), Positives = 18/42 (42%)
Frame = -3
Query: 653 FDFDFVRLVNVDLDFIRYFLFNGVRFRYVYWVFDVFLDGKGN 528
F+F++ + N + F F + YW D F GK N
Sbjct: 1552 FNFEYKDVSNYAKNLTYQFFDYARYFTFPYWNEDYFFQGKHN 1593
>AY146760-1|AAO12075.1| 313|Anopheles gambiae odorant-binding
protein AgamOBP31 protein.
Length = 313
Score = 23.8 bits (49), Expect = 6.9
Identities = 10/24 (41%), Positives = 13/24 (54%)
Frame = +3
Query: 696 VKVPFPALHCREKGPVPVKYEXRC 767
++VP L C KG +P E RC
Sbjct: 166 LRVPTDLLQCYSKGDLPDVPETRC 189
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 678,990
Number of Sequences: 2352
Number of extensions: 13230
Number of successful extensions: 39
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 92199573
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -