Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_L16
         (865 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z75531-12|CAA99806.4|  348|Caenorhabditis elegans Hypothetical p...    28   9.9  
U46675-2|AAB52644.1|  125|Caenorhabditis elegans Hypothetical pr...    28   9.9  
AC024877-2|AAF60905.2|  608|Caenorhabditis elegans Hypothetical ...    28   9.9  

>Z75531-12|CAA99806.4|  348|Caenorhabditis elegans Hypothetical
           protein C54D10.6 protein.
          Length = 348

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -3

Query: 203 VAFIATSEIMSSIRSYVIDAPFVLFLLFDCLRCAFLLLG 87
           +  IAT  ++S+I + ++  P+ +F    C RC  +  G
Sbjct: 283 LCLIATHGLLSTITTIMVHKPYRVFFFILCRRCLLMPAG 321


>U46675-2|AAB52644.1|  125|Caenorhabditis elegans Hypothetical
           protein F35A5.5 protein.
          Length = 125

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/56 (26%), Positives = 23/56 (41%)
 Frame = +3

Query: 600 VPYEVKVHVDKPYEVKVKVPTPYTVEKKIPYEVKVPFPALHCREKGPVPVKYEXRC 767
           +P  + + +  P  V   VP P  V   +P  + +P P        PVPV  +  C
Sbjct: 1   MPPPIPIPIPAPVPVPAPVPQPVPVPMPMPMPMPMPMPV-------PVPVPVQSNC 49


>AC024877-2|AAF60905.2|  608|Caenorhabditis elegans Hypothetical
           protein Y95B8A.7 protein.
          Length = 608

 Score = 27.9 bits (59), Expect = 9.9
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
 Frame = +1

Query: 430 RIQSRNTSPIPSRRKYPMR*KCPYLSP-TPSKRKFPLPSRNTSNTQYTYLN 579
           R Q +  + +P+  + P   K P+ +P  P  R+F +    T N +Y  LN
Sbjct: 221 RSQEKRKNQLPAVHEPPSFMKTPWFAPPAPEGREFNIVDDRTINEKYAGLN 271


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,657,150
Number of Sequences: 27780
Number of extensions: 291765
Number of successful extensions: 923
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 842
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 917
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2160943708
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)