Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_L15
         (876 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC011584-1|AAH11584.1|  348|Homo sapiens CCDC16 protein protein.       34   0.59 
BC009044-1|AAH09044.1|  238|Homo sapiens CCDC16 protein protein.       34   0.59 
BC002913-1|AAH02913.2|  366|Homo sapiens CCDC16 protein protein.       34   0.59 
AK055707-1|BAB70992.1|  372|Homo sapiens protein ( Homo sapiens ...    34   0.59 
BC029574-1|AAH29574.1|  336|Homo sapiens proline-rich cyclin A1-...    31   5.5  

>BC011584-1|AAH11584.1|  348|Homo sapiens CCDC16 protein protein.
          Length = 348

 Score = 34.3 bits (75), Expect = 0.59
 Identities = 22/66 (33%), Positives = 37/66 (56%)
 Frame = -3

Query: 262 SLLFRNIISKNDSQSEMIANSIS*YYVSVNEPVQTTDQKEKEEPASDVPIPEGFFDDPVL 83
           S+L  +  S N  ++ +I +S S     ++E V      E+ E  ++  +PEGFFDDP +
Sbjct: 179 SVLPNDFFSTNPPKAPIIPHSGSIEKAEIHEKVV-----ERRENTAEA-LPEGFFDDPEV 232

Query: 82  DAKVTR 65
           DA+V +
Sbjct: 233 DARVRK 238


>BC009044-1|AAH09044.1|  238|Homo sapiens CCDC16 protein protein.
          Length = 238

 Score = 34.3 bits (75), Expect = 0.59
 Identities = 22/66 (33%), Positives = 37/66 (56%)
 Frame = -3

Query: 262 SLLFRNIISKNDSQSEMIANSIS*YYVSVNEPVQTTDQKEKEEPASDVPIPEGFFDDPVL 83
           S+L  +  S N  ++ +I +S S     ++E V      E+ E  ++  +PEGFFDDP +
Sbjct: 69  SVLPNDFFSTNPPKAPIIPHSGSIEKAEIHEKVV-----ERRENTAEA-LPEGFFDDPEV 122

Query: 82  DAKVTR 65
           DA+V +
Sbjct: 123 DARVRK 128


>BC002913-1|AAH02913.2|  366|Homo sapiens CCDC16 protein protein.
          Length = 366

 Score = 34.3 bits (75), Expect = 0.59
 Identities = 22/66 (33%), Positives = 37/66 (56%)
 Frame = -3

Query: 262 SLLFRNIISKNDSQSEMIANSIS*YYVSVNEPVQTTDQKEKEEPASDVPIPEGFFDDPVL 83
           S+L  +  S N  ++ +I +S S     ++E V      E+ E  ++  +PEGFFDDP +
Sbjct: 197 SVLPNDFFSTNPPKAPIIPHSGSIEKAEIHEKVV-----ERRENTAEA-LPEGFFDDPEV 250

Query: 82  DAKVTR 65
           DA+V +
Sbjct: 251 DARVRK 256


>AK055707-1|BAB70992.1|  372|Homo sapiens protein ( Homo sapiens
           cDNA FLJ31145 fis, clone IMR322001332, weakly similar to
           NEUROFILAMENT TRIPLET M PROTEIN. ).
          Length = 372

 Score = 34.3 bits (75), Expect = 0.59
 Identities = 22/66 (33%), Positives = 37/66 (56%)
 Frame = -3

Query: 262 SLLFRNIISKNDSQSEMIANSIS*YYVSVNEPVQTTDQKEKEEPASDVPIPEGFFDDPVL 83
           S+L  +  S N  ++ +I +S S     ++E V      E+ E  ++  +PEGFFDDP +
Sbjct: 203 SVLPNDFFSTNPPKAPIIPHSGSIEKAEIHEKVV-----ERRENTAEA-LPEGFFDDPEV 256

Query: 82  DAKVTR 65
           DA+V +
Sbjct: 257 DARVRK 262


>BC029574-1|AAH29574.1|  336|Homo sapiens proline-rich cyclin
           A1-interacting protein protein.
          Length = 336

 Score = 31.1 bits (67), Expect = 5.5
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -3

Query: 682 DREDPK*RVWGDVDCFPFCPQDRECSYRRPRCEGSRVVP 566
           ++ +PK R W +  C   C +  +C +R  +C G  + P
Sbjct: 15  EKTEPKARSWDESRCRGDCKEPDKCCWRHKQCTGHIIYP 53


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,029,182
Number of Sequences: 237096
Number of extensions: 2330429
Number of successful extensions: 5250
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5250
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11159604822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)