Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_L15
(876 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X17551-2|CAA35587.1| 888|Drosophila melanogaster protein ( D.me... 60 3e-09
AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p pro... 60 3e-09
AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown prot... 60 4e-09
AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein. 60 5e-09
AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse tran... 60 5e-09
AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p pro... 52 1e-06
M17214-2|AAA28508.1| 858|Drosophila melanogaster protein ( D.me... 51 2e-06
L28945-1|AAA50509.1| 910|Drosophila melanogaster p90 ribosomal ... 34 0.22
BT004472-1|AAO42636.1| 892|Drosophila melanogaster SD05277p pro... 34 0.22
AE014298-3193|AAF50945.1| 911|Drosophila melanogaster CG17596-P... 34 0.22
AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC... 31 1.6
AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical... 31 1.6
>X17551-2|CAA35587.1| 888|Drosophila melanogaster protein (
D.melanogaster white-one mutant DNA with Doc retroposon,
inserted inwhite locuspromoter region. ).
Length = 888
Score = 60.5 bits (140), Expect = 3e-09
Identities = 28/70 (40%), Positives = 42/70 (60%)
Frame = +3
Query: 297 MICRRSKMSLRNKVTLYKTCIRPVTTYASVVFAHAARTNLKSFQIIQSRFCRIAVEALWF 476
+I RS +SL K LY + ++P+ TY S ++ +A+R+N+ Q QSR RI A W+
Sbjct: 770 LINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWY 829
Query: 477 VRNVEFHNDL 506
+RN H DL
Sbjct: 830 LRNENIHRDL 839
>AY047531-1|AAK77263.1| 888|Drosophila melanogaster GH03753p
protein.
Length = 888
Score = 60.5 bits (140), Expect = 3e-09
Identities = 28/70 (40%), Positives = 42/70 (60%)
Frame = +3
Query: 297 MICRRSKMSLRNKVTLYKTCIRPVTTYASVVFAHAARTNLKSFQIIQSRFCRIAVEALWF 476
+I RS +SL K LY + ++P+ TY S ++ +A+R+N+ Q QSR RI A W+
Sbjct: 770 LINARSPLSLEFKALLYNSVLKPIWTYGSELWGNASRSNIDIIQRAQSRILRIITGAPWY 829
Query: 477 VRNVEFHNDL 506
+RN H DL
Sbjct: 830 LRNENIHRDL 839
>AF237761-2|AAF81411.1| 908|Drosophila melanogaster unknown
protein.
Length = 908
Score = 60.1 bits (139), Expect = 4e-09
Identities = 27/72 (37%), Positives = 41/72 (56%)
Frame = +3
Query: 291 YPMICRRSKMSLRNKVTLYKTCIRPVTTYASVVFAHAARTNLKSFQIIQSRFCRIAVEAL 470
Y ++ RSK+SL NK+T+YK + P Y ++ A +++K Q IQ++ R+
Sbjct: 777 YWLLSSRSKLSLSNKLTIYKQILAPNWKYGCQIWGLACDSHIKRIQAIQNKVARLITGCE 836
Query: 471 WFVRNVEFHNDL 506
WFVRN H DL
Sbjct: 837 WFVRNTTLHRDL 848
>AY180919-1|AAN87272.1| 884|Drosophila melanogaster ORF1 protein.
Length = 884
Score = 59.7 bits (138), Expect = 5e-09
Identities = 24/80 (30%), Positives = 47/80 (58%)
Frame = +3
Query: 258 RLMSVVCTTEKYPMICRRSKMSLRNKVTLYKTCIRPVTTYASVVFAHAARTNLKSFQIIQ 437
++ ++CT YP+I R+SK+S+ NK+ ++KT P+ Y S V+ A+T++K QI Q
Sbjct: 793 KVNKIICTL--YPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQ 850
Query: 438 SRFCRIAVEALWFVRNVEFH 497
++ ++ + ++ H
Sbjct: 851 NKLLKLIMNLPYYTNTKYLH 870
>AF456125-1|AAL57609.1| 832|Drosophila melanogaster reverse
transcriptase protein.
Length = 832
Score = 59.7 bits (138), Expect = 5e-09
Identities = 24/80 (30%), Positives = 47/80 (58%)
Frame = +3
Query: 258 RLMSVVCTTEKYPMICRRSKMSLRNKVTLYKTCIRPVTTYASVVFAHAARTNLKSFQIIQ 437
++ ++CT YP+I R+SK+S+ NK+ ++KT P+ Y S V+ A+T++K QI Q
Sbjct: 741 KVNKIICTL--YPLINRKSKLSISNKIIIFKTIFNPILMYGSPVWGRCAQTHIKKLQICQ 798
Query: 438 SRFCRIAVEALWFVRNVEFH 497
++ ++ + ++ H
Sbjct: 799 NKLLKLIMNLPYYTNTKYLH 818
>AY060438-1|AAL25477.1| 906|Drosophila melanogaster LD46618p
protein.
Length = 906
Score = 52.0 bits (119), Expect = 1e-06
Identities = 22/71 (30%), Positives = 40/71 (56%)
Frame = +3
Query: 297 MICRRSKMSLRNKVTLYKTCIRPVTTYASVVFAHAARTNLKSFQIIQSRFCRIAVEALWF 476
++ R+S M+LR K +Y C+ P+ Y ++ AA++N Q++Q+R R + ++
Sbjct: 785 LLNRKSTMTLRAKRAVYVHCVAPIWLYGIQIWGIAAKSNYNRIQVLQNRAMRAITDCPYY 844
Query: 477 VRNVEFHNDLD 509
VR H DL+
Sbjct: 845 VRGTTLHRDLN 855
>M17214-2|AAA28508.1| 858|Drosophila melanogaster protein (
D.melanogaster Fw repetitiveelement putative reverse
transcriptase, complete cds,and putative binding
protein, 3' end. ).
Length = 858
Score = 51.2 bits (117), Expect = 2e-06
Identities = 23/66 (34%), Positives = 39/66 (59%)
Frame = +3
Query: 312 SKMSLRNKVTLYKTCIRPVTTYASVVFAHAARTNLKSFQIIQSRFCRIAVEALWFVRNVE 491
S +SL +KV LY + ++P+ TY S ++ +A+ +N+ Q QS+ R A W+VR+
Sbjct: 777 SPLSLDHKVLLYNSILKPIWTYGSQLWGNASNSNIDIIQRAQSKILRTITGAPWYVRSEN 836
Query: 492 FHNDLD 509
DL+
Sbjct: 837 IQRDLN 842
>L28945-1|AAA50509.1| 910|Drosophila melanogaster p90 ribosomal S6
kinase protein.
Length = 910
Score = 34.3 bits (75), Expect = 0.22
Identities = 26/82 (31%), Positives = 39/82 (47%)
Frame = +1
Query: 472 GSSGTLNSITTWTLXSISKYLQSASMCHFAKAARHENPRIVAVGNYIPDPADRMESSRRR 651
G+SG +S+TT T + LQ +AA ++ +I AD ++S+R+R
Sbjct: 76 GNSGVTSSVTTVTSSQRRQQLQQVQQQSALQAALEQH--------HISPTAD-LDSARKR 126
Query: 652 PKHVISDPPDPLTVLLDTSSTG 717
P H PP L L D+ S G
Sbjct: 127 PTHRTLCPPPELMELSDSESQG 148
>BT004472-1|AAO42636.1| 892|Drosophila melanogaster SD05277p
protein.
Length = 892
Score = 34.3 bits (75), Expect = 0.22
Identities = 26/82 (31%), Positives = 39/82 (47%)
Frame = +1
Query: 472 GSSGTLNSITTWTLXSISKYLQSASMCHFAKAARHENPRIVAVGNYIPDPADRMESSRRR 651
G+SG +S+TT T + LQ +AA ++ +I AD ++S+R+R
Sbjct: 77 GNSGVTSSVTTVTSSQRRQQLQQVQQQSALQAALEQH--------HISPTAD-LDSARKR 127
Query: 652 PKHVISDPPDPLTVLLDTSSTG 717
P H PP L L D+ S G
Sbjct: 128 PTHRTLCPPPELMELSDSESQG 149
>AE014298-3193|AAF50945.1| 911|Drosophila melanogaster CG17596-PA
protein.
Length = 911
Score = 34.3 bits (75), Expect = 0.22
Identities = 26/82 (31%), Positives = 39/82 (47%)
Frame = +1
Query: 472 GSSGTLNSITTWTLXSISKYLQSASMCHFAKAARHENPRIVAVGNYIPDPADRMESSRRR 651
G+SG +S+TT T + LQ +AA ++ +I AD ++S+R+R
Sbjct: 77 GNSGVTSSVTTVTSSQRRQQLQQVQQQSALQAALEQH--------HISPTAD-LDSARKR 127
Query: 652 PKHVISDPPDPLTVLLDTSSTG 717
P H PP L L D+ S G
Sbjct: 128 PTHRTLCPPPELMELSDSESQG 149
>AE013599-1608|ABC66062.1| 1526|Drosophila melanogaster CG3845-PC,
isoform C protein.
Length = 1526
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 624 GQNGKQSTSPQTRHFGSSRSTNSAFRYLKHWSPFSSKPSLATKGSTSKLTLXP 782
G+NG +S+ T HF + S NS + +H S S +P + +G +S P
Sbjct: 222 GRNGSRSSGGPTGHFSTGYSKNSV-KIRQHDSEVSPRPRRSYQGDSSSSRYYP 273
>AB096103-1|BAD83642.1| 1526|Drosophila melanogaster hypothetical
protein protein.
Length = 1526
Score = 31.5 bits (68), Expect = 1.6
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +3
Query: 624 GQNGKQSTSPQTRHFGSSRSTNSAFRYLKHWSPFSSKPSLATKGSTSKLTLXP 782
G+NG +S+ T HF + S NS + +H S S +P + +G +S P
Sbjct: 222 GRNGSRSSGGPTGHFSTGYSKNSV-KIRQHDSEVSPRPRRSYQGDSSSSRYYP 273
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,433,330
Number of Sequences: 53049
Number of extensions: 709139
Number of successful extensions: 1944
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1856
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1944
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4250176164
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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