Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_L15
         (876 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical pr...    33   0.20 
AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical ...    32   0.62 
Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical pr...    29   4.4  
Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical pr...    29   4.4  

>U58738-4|AAB00604.1|  358|Caenorhabditis elegans Hypothetical
           protein F31A9.6 protein.
          Length = 358

 Score = 33.5 bits (73), Expect = 0.20
 Identities = 19/58 (32%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
 Frame = +3

Query: 288 KYPMICRRSKMSLRNK---VTLYKTCIRPVTTYASVVFAHAARTNLKSFQIIQSRFCR 452
           K+ +    +K S  NK   + LYKT IRP   Y +VV +   +++ K+ + +Q+ F R
Sbjct: 202 KFQLANMFNKYSTSNKKLMILLYKTFIRPRLEYGTVVSSPTKKSDEKTIESVQNAFTR 259


>AF043700-1|AAB97571.2|  328|Caenorhabditis elegans Hypothetical
           protein K09H9.4 protein.
          Length = 328

 Score = 31.9 bits (69), Expect = 0.62
 Identities = 14/39 (35%), Positives = 24/39 (61%)
 Frame = +3

Query: 336 VTLYKTCIRPVTTYASVVFAHAARTNLKSFQIIQSRFCR 452
           + LYKT IRP   Y +VV +   +++ K+ + +Q+ F R
Sbjct: 191 ILLYKTFIRPRLEYGTVVSSPTKKSDEKAIESVQNAFTR 229


>Z69646-2|CAA93475.1| 1087|Caenorhabditis elegans Hypothetical
           protein F57C7.1b protein.
          Length = 1087

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 515 SPSVSIYSRRQCATSPKRHDTRTLASWPSVTTFPILR 625
           +P VSIY R+   T+ K   +  +AS P +   PILR
Sbjct: 850 TPYVSIYGRKVVGTNDKIELSERMASIPQMYITPILR 886


>Z69646-1|CAA93473.3| 1209|Caenorhabditis elegans Hypothetical
           protein F57C7.1a protein.
          Length = 1209

 Score = 29.1 bits (62), Expect = 4.4
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +2

Query: 515 SPSVSIYSRRQCATSPKRHDTRTLASWPSVTTFPILR 625
           +P VSIY R+   T+ K   +  +AS P +   PILR
Sbjct: 850 TPYVSIYGRKVVGTNDKIELSERMASIPQMYITPILR 886


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,430,748
Number of Sequences: 27780
Number of extensions: 374935
Number of successful extensions: 1077
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1008
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1077
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2202903780
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)