Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_L11
         (850 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     25   0.67 
AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamat...    25   1.2  
AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cycl...    25   1.2  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    25   1.2  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    23   4.7  
AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced prot...    23   4.7  
AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor p...    22   6.2  
AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor p...    22   6.2  
DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholi...    22   8.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   8.2  

>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 25.4 bits (53), Expect = 0.67
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 1/52 (1%)
 Frame = +3

Query: 192 KKYFKYAEQLTKVAHREQIAFEVVLDDLHEMNEDLTEAV-KQNTRRYTNMVS 344
           ++ F Y     ++  +EQ+    V  + HE  + L  AV +      TN++S
Sbjct: 460 QQQFPYVHDTLQIQPQEQLTLSKVTSNYHEEFQSLNNAVGEMEATNVTNILS 511


>AY463910-1|AAR24352.1|  843|Apis mellifera metabotropic glutamate
           receptor 1 protein.
          Length = 843

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +3

Query: 612 VTRCTDVKPLLVVATYSCSACGAETYQPVRALQF 713
           + R  D+ P + +  +    CG +TY   ++L F
Sbjct: 5   INRDEDILPGITIGVHILDTCGRDTYALNQSLHF 38


>AB204559-1|BAD89804.1|  832|Apis mellifera soluble guanylyl cyclase
           beta-3 protein.
          Length = 832

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 12/33 (36%), Positives = 18/33 (54%)
 Frame = +1

Query: 139 KNLSRTFSLIFVKLMMKEKSILNMLNNLLKLHT 237
           K ++  F L+   +  K  SILN  NN+ +L T
Sbjct: 241 KKITHFFDLVRPLIAFKFHSILNRTNNIFELVT 273


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/34 (26%), Positives = 17/34 (50%)
 Frame = +3

Query: 612 VTRCTDVKPLLVVATYSCSACGAETYQPVRALQF 713
           + R  D+ P + +  +    CG +TY   ++L F
Sbjct: 95  INRDEDILPGITIGVHILDTCGRDTYALNQSLHF 128


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -3

Query: 338 HISVSSGILFDCLSQI 291
           H+SVS G L DC +++
Sbjct: 306 HLSVSGGALNDCHAEV 321


>AB264313-1|BAF43600.1|  900|Apis mellifera ecdysone-induced protein
           75 protein.
          Length = 900

 Score = 22.6 bits (46), Expect = 4.7
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 676 PHALHEYVATTSSGFTSVHRVTIPRT 599
           PH       +TSSG   +HR ++ +T
Sbjct: 537 PHRRRANSGSTSSGDDELHRASLSKT 562


>AY263366-1|AAO92605.1|  139|Apis mellifera octopamine receptor
           protein.
          Length = 139

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = -2

Query: 429 FCAQCIHPR-NPLLLPL*ICNQA 364
           FC  CIHP    +L  L  CN A
Sbjct: 34  FCRNCIHPTVFSVLFWLGYCNSA 56


>AJ547798-1|CAD67999.1|  587|Apis mellifera octopamine receptor
           protein.
          Length = 587

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 11/23 (47%), Positives = 12/23 (52%), Gaps = 1/23 (4%)
 Frame = -2

Query: 429 FCAQCIHPR-NPLLLPL*ICNQA 364
           FC  CIHP    +L  L  CN A
Sbjct: 482 FCRNCIHPTVFSVLFWLGYCNSA 504


>DQ026038-1|AAY87897.1|  520|Apis mellifera nicotinic acetylcholine
           receptor beta1subunit protein.
          Length = 520

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 15/52 (28%), Positives = 25/52 (48%)
 Frame = +3

Query: 387 VVAKDSLDVYIEHRIMLEARNHRIPGEMRDPRNRYPPELIRRFEVYFKDLST 542
           ++AK  L  +I + + +      I    R PR    P+LIR+  ++ K L T
Sbjct: 295 LIAKYLLFTFIMNTVSILVTVIIINWNFRGPRTHRMPQLIRK--IFLKYLPT 344


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.8 bits (44), Expect = 8.2
 Identities = 6/21 (28%), Positives = 14/21 (66%)
 Frame = +3

Query: 390 VAKDSLDVYIEHRIMLEARNH 452
           +  D+ +VY++  ++ E +NH
Sbjct: 792 IPMDATEVYLDGNVLRELQNH 812


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 209,504
Number of Sequences: 438
Number of extensions: 4902
Number of successful extensions: 22
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27309825
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)