Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_L07
         (874 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    29   0.19 
AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-conta...    26   1.3  
AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcript...    26   1.3  
AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding pr...    25   4.0  
AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding pr...    25   4.0  
AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    24   5.3  

>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 29.1 bits (62), Expect = 0.19
 Identities = 18/60 (30%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
 Frame = +3

Query: 345 MAETDSETIPNGTGPLSTEEEDERLKQRPADID-ADVREMERRKRVEALMSSKLFREELE 521
           + E   E +P    P     E+E+ ++  AD + AD  E E  +  + L  ++L  EELE
Sbjct: 61  LPEDAPEPVPEDGSPDEEHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELE 120


>AJ439353-3|CAD27925.1| 1200|Anopheles gambiae putative TPR-containing
            phosphoprotein protein.
          Length = 1200

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 31/102 (30%), Positives = 44/102 (43%), Gaps = 1/102 (0%)
 Frame = +1

Query: 355  RTQRRSRTAPGPCPPRRKTSA*SSVRPTSTPMSAKWNAGSASKLSCPRSCSAKNWNGSST 534
            R++ RSR+        R  S     R  S   S   +AG  S+ S  RS S      S  
Sbjct: 1102 RSRSRSRSGSAKGSRSRSRSGSGGSRSRSRSRSRSQSAG--SRKSGSRSRSRSGSQASRG 1159

Query: 535  SRCTRAATLRSCRGSR-RWSAGDCTPEASGVLAAFCRSTTSE 657
            SR +R+ + RS  GSR R  +G  + +AS +       + SE
Sbjct: 1160 SRRSRSRS-RSRSGSRSRSRSGSGSRQASPISRKSVSGSESE 1200


>AB090823-2|BAC57922.1| 1154|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1154

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 14/55 (25%), Positives = 27/55 (49%)
 Frame = +3

Query: 393  STEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGD 557
            +  + +E+  +RP+   +  R  ERR  + A M+    R    +  +++  EGGD
Sbjct: 1062 TVRQREEQCGERPSMPSSSPRTSERRANIRARMARLRQRHRQHQQDERRGVEGGD 1116


>AY330172-1|AAQ16278.1|  170|Anopheles gambiae odorant-binding
           protein AgamOBP52 protein.
          Length = 170

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = +1

Query: 523 GSSTSRCTRAATLRSCRGSRRWSAG-DCTPEASGVLAAFC 639
           G +  RC R     +C  + RWSA   CT    GV   FC
Sbjct: 134 GFAVDRCVRLLIYENC-PTARWSASVACTKSRQGV--PFC 170


>AJ618922-1|CAF02001.1|  272|Anopheles gambiae odorant-binding
           protein OBPjj5a protein.
          Length = 272

 Score = 24.6 bits (51), Expect = 4.0
 Identities = 15/40 (37%), Positives = 18/40 (45%), Gaps = 1/40 (2%)
 Frame = +1

Query: 523 GSSTSRCTRAATLRSCRGSRRWSAG-DCTPEASGVLAAFC 639
           G +  RC R     +C  + RWSA   CT    GV   FC
Sbjct: 236 GFAVDRCVRLLIYENC-PTARWSASVACTKSRQGV--PFC 272


>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
           channel alpha subunitprotein.
          Length = 2139

 Score = 24.2 bits (50), Expect = 5.3
 Identities = 17/56 (30%), Positives = 27/56 (48%)
 Frame = +3

Query: 396 TEEEDERLKQRPADIDADVREMERRKRVEALMSSKLFREELERVLDQQMHEGGDAP 563
           T E  + ++ R AD +A  RE+E RKR E        +++ E   D +  + G  P
Sbjct: 20  TRESLQAIEARIADEEAKQRELE-RKRAEGESDFGRKKKKKEIRYDDEDEDEGPQP 74


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 782,340
Number of Sequences: 2352
Number of extensions: 16057
Number of successful extensions: 63
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 62
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 63
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 93439926
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)