Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_L04
         (951 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, mem...    35   0.50 
AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, mem...    35   0.50 
AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein pro...    35   0.50 
AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrom...    32   3.5  
AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.                32   3.5  

>BC040943-1|AAH40943.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 34.7 bits (76), Expect = 0.50
 Identities = 27/100 (27%), Positives = 28/100 (28%), Gaps = 1/100 (1%)
 Frame = -2

Query: 521 GGGPXKKKXXPPPPXPPXXXXXXXGXXXXXXXXXVGAPXXXXXXFLRG-GDHPXXVXFSP 345
           G  P  K    PPP PP       G          G+P             HP      P
Sbjct: 307 GSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAA-PP 365

Query: 344 PPXXPPXKXXKXFXPPPRGXXXGXXXAPXXEPXXXPKKXP 225
           PP  PP        PPP     G   AP   P   P   P
Sbjct: 366 PPPPPPAADYPTLPPPPLSQPTG--GAPPPPPPPPPPGPP 403


>AL096774-6|CAC18518.1|  498|Homo sapiens WAS protein family, member
           2 protein.
          Length = 498

 Score = 34.7 bits (76), Expect = 0.50
 Identities = 27/100 (27%), Positives = 28/100 (28%), Gaps = 1/100 (1%)
 Frame = -2

Query: 521 GGGPXKKKXXPPPPXPPXXXXXXXGXXXXXXXXXVGAPXXXXXXFLRG-GDHPXXVXFSP 345
           G  P  K    PPP PP       G          G+P             HP      P
Sbjct: 307 GSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAA-PP 365

Query: 344 PPXXPPXKXXKXFXPPPRGXXXGXXXAPXXEPXXXPKKXP 225
           PP  PP        PPP     G   AP   P   P   P
Sbjct: 366 PPPPPPAADYPTLPPPPLSQPTG--GAPPPPPPPPPPGPP 403


>AB026542-1|BAA81795.1|  498|Homo sapiens WASP-family protein
           protein.
          Length = 498

 Score = 34.7 bits (76), Expect = 0.50
 Identities = 27/100 (27%), Positives = 28/100 (28%), Gaps = 1/100 (1%)
 Frame = -2

Query: 521 GGGPXKKKXXPPPPXPPXXXXXXXGXXXXXXXXXVGAPXXXXXXFLRG-GDHPXXVXFSP 345
           G  P  K    PPP PP       G          G+P             HP      P
Sbjct: 307 GSPPGPKPGFAPPPAPPPPPPPMIGIPPPPPPVGFGSPGTPPPPSPPSFPPHPDFAA-PP 365

Query: 344 PPXXPPXKXXKXFXPPPRGXXXGXXXAPXXEPXXXPKKXP 225
           PP  PP        PPP     G   AP   P   P   P
Sbjct: 366 PPPPPPAADYPTLPPPPLSQPTG--GAPPPPPPPPPPGPP 403


>AJ509090-1|CAD48858.1|  625|Homo sapiens Wiskott-Aldrich syndrome
           protein family member 4 protein.
          Length = 625

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 24/99 (24%), Positives = 26/99 (26%)
 Frame = -2

Query: 521 GGGPXKKKXXPPPPXPPXXXXXXXGXXXXXXXXXVGAPXXXXXXFLRGGDHPXXVXFSPP 342
           G  P  K    PPP PP       G          G+P             P    F+ P
Sbjct: 435 GSPPSSKPGFAPPPAPPPPPPPMIGIPPPPPPIGFGSPGTPPPP--SSPSFPPHPDFAAP 492

Query: 341 PXXPPXKXXKXFXPPPRGXXXGXXXAPXXEPXXXPKKXP 225
           P  PP         PP         AP   P   P   P
Sbjct: 493 PPLPPPPAADYPTLPPPPLSQPTRGAPPPPPPPPPGPPP 531


>AF134304-1|AAD33053.2|  496|Homo sapiens Scar2 protein.
          Length = 496

 Score = 31.9 bits (69), Expect = 3.5
 Identities = 24/99 (24%), Positives = 26/99 (26%)
 Frame = -2

Query: 521 GGGPXKKKXXPPPPXPPXXXXXXXGXXXXXXXXXVGAPXXXXXXFLRGGDHPXXVXFSPP 342
           G  P  K    PPP PP       G          G+P             P    F+ P
Sbjct: 306 GSPPSSKPGFAPPPAPPPPPPPMIGIPPPPPPIGFGSPGTPPPP--SSPSFPPHPDFAAP 363

Query: 341 PXXPPXKXXKXFXPPPRGXXXGXXXAPXXEPXXXPKKXP 225
           P  PP         PP         AP   P   P   P
Sbjct: 364 PPLPPPPAADYPTLPPPPLSQPTRGAPPPPPPPPPGPPP 402


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.317    0.149    0.543 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,556,997
Number of Sequences: 237096
Number of extensions: 1535834
Number of successful extensions: 4109
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1788
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3306
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12547615372
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)