Bombyx BLAST Result against spombe

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_K22
         (852 letters)

Database: spombe 
           5004 sequences; 2,362,478 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch...    71   3e-13
SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces pomb...    56   5e-09
SPAC1296.03c |sxa2||serine carboxypeptidase Sxa2|Schizosaccharom...    48   1e-06
SPCC126.08c |||lectin |Schizosaccharomyces pombe|chr 3|||Manual        27   3.4  
SPCC126.07c |||human CTD-binding SR-like protein rA9 homolog|Sch...    27   3.4  
SPAC6F6.16c |||sequence orphan|Schizosaccharomyces pombe|chr 1||...    27   4.5  
SPBC1718.07c |zfs1|moc4|transcription factor Zfs1 |Schizosacchar...    26   7.8  

>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
           Y|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 1002

 Score = 70.5 bits (165), Expect = 3e-13
 Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 1/100 (1%)
 Frame = +3

Query: 468 IWLQGGPGASSLTSLFNEIGPYKVTHKGNLLPY-PHTWLQNHSLVFIDNPIGTGFSFTDS 644
           +WL GGPG SSLT LF E+GP  +  +     Y PH+W  N S++F+D PI TGFS   +
Sbjct: 619 LWLNGGPGCSSLTGLFMELGPSSINIETLKPEYNPHSWNSNASVIFLDQPINTGFS---N 675

Query: 645 EDGYVHDMDTYGHHLYLTVKQLVTVYPGIANCTIVCGXES 764
            D  V D  T G  +Y  +      +P  A+       ES
Sbjct: 676 GDDSVLDTVTAGKDVYAFLNLFFAKFPQYAHLDFHIAGES 715



 Score = 26.2 bits (55), Expect = 5.9
 Identities = 9/19 (47%), Positives = 12/19 (63%)
 Frame = +2

Query: 758 GEXYAGXYVPXLAMQLHRH 814
           GE YAG Y+P  A ++  H
Sbjct: 713 GESYAGHYIPQFAKEIMEH 731


>SPBC16G5.09 |||serine carboxypeptidase |Schizosaccharomyces
           pombe|chr 2|||Manual
          Length = 510

 Score = 56.4 bits (130), Expect = 5e-09
 Identities = 22/61 (36%), Positives = 37/61 (60%)
 Frame = +3

Query: 468 IWLQGGPGASSLTSLFNEIGPYKVTHKGNLLPYPHTWLQNHSLVFIDNPIGTGFSFTDSE 647
           +WL GGPG SS      E+GP+++         P  W +  +L+F+D P+GTG+S++ ++
Sbjct: 78  LWLNGGPGCSSEDGSLMEVGPFRLDDNNTFQLNPGRWDELGNLLFVDQPLGTGYSYSLAK 137

Query: 648 D 650
           D
Sbjct: 138 D 138


>SPAC1296.03c |sxa2||serine carboxypeptidase
           Sxa2|Schizosaccharomyces pombe|chr 1|||Manual
          Length = 507

 Score = 48.4 bits (110), Expect = 1e-06
 Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
 Frame = +3

Query: 468 IWLQGGPGASSLTSLFNEIGPYKVTHKG-NLLPYPHTWLQNHSLVFIDNPIGTGFS 632
           +WLQGGPG +     F+E GP +++    +    P +W    +++++D P GTG+S
Sbjct: 103 VWLQGGPGCAGTLGFFSENGPIEISQSSPSPSLNPESWTNFANMLWLDQPFGTGYS 158


>SPCC126.08c |||lectin |Schizosaccharomyces pombe|chr 3|||Manual
          Length = 312

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 15/37 (40%), Positives = 19/37 (51%)
 Frame = +3

Query: 618 GTGFSFTDSEDGYVHDMDTYGHHLYLTVKQLVTVYPG 728
           G  F FTD  +GY   +DTY +H   T+   V V  G
Sbjct: 116 GPVFGFTDKFNGYGIFIDTYNNHRPGTLFPRVIVMKG 152


>SPCC126.07c |||human CTD-binding SR-like protein rA9
           homolog|Schizosaccharomyces pombe|chr 3|||Manual
          Length = 571

 Score = 27.1 bits (57), Expect = 3.4
 Identities = 10/28 (35%), Positives = 16/28 (57%)
 Frame = +1

Query: 553 IYCLTPTRGCKITRWCSSTTPSGLGSVL 636
           I CL+    C + +W SS+ P+ + S L
Sbjct: 19  IICLSNLPNCPLDQWDSSSVPASISSTL 46


>SPAC6F6.16c |||sequence orphan|Schizosaccharomyces pombe|chr
           1|||Manual
          Length = 282

 Score = 26.6 bits (56), Expect = 4.5
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -1

Query: 420 QKNEFELYVLFTVNNQSNSRIQRIMTCPLGCPHGPHSASLLQYTALE 280
           +K   EL+ L T N+Q NS    +  C LG PHG     L  +  +E
Sbjct: 233 KKRRLELFQL-TNNHQKNSEACEM--CRLGLPHGSFFELLRDWKKIE 276


>SPBC1718.07c |zfs1|moc4|transcription factor Zfs1
           |Schizosaccharomyces pombe|chr 2|||Manual
          Length = 404

 Score = 25.8 bits (54), Expect = 7.8
 Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 5/30 (16%)
 Frame = +2

Query: 668 GYVWSPPVLNSEAT-----GDSVSGNCKLH 742
           GY W+P +L+S AT     G S  GN   H
Sbjct: 120 GYAWTPSLLSSNATSYLHSGSSPHGNTSNH 149


  Database: spombe
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 2,362,478
  Number of sequences in database:  5004
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,239,363
Number of Sequences: 5004
Number of extensions: 63233
Number of successful extensions: 227
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 225
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 422462090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)