Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_K19
(862 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X66113-1|CAA46904.1| 885|Homo sapiens PM/Scl 100kD nucleolar pr... 158 2e-38
L01457-1|AAB59352.1| 860|Homo sapiens PM-Scl autoantigen protein. 158 2e-38
BC073788-1|AAH73788.1| 885|Homo sapiens exosome component 10 pr... 158 2e-38
BC039901-1|AAH39901.1| 885|Homo sapiens exosome component 10 pr... 158 2e-38
AL109811-9|CAI22106.1| 860|Homo sapiens exosome component 10 pr... 158 2e-38
AL109811-8|CAI22107.1| 885|Homo sapiens exosome component 10 pr... 158 2e-38
AJ300188-2|CAC15569.1| 860|Homo sapiens PM-scl autoantigen prot... 158 2e-38
AB209236-1|BAD92473.1| 431|Homo sapiens exosome component 10 is... 95 3e-19
AK094438-1|BAC04356.1| 758|Homo sapiens protein ( Homo sapiens ... 35 0.44
AK055004-1|BAB70838.1| 599|Homo sapiens protein ( Homo sapiens ... 35 0.44
AB061798-1|BAC10986.1| 514|Homo sapiens HBE269 protein. 34 0.58
BC032831-1|AAH32831.2| 494|Homo sapiens G protein-coupled recep... 32 3.1
AY288418-1|AAP72127.1| 494|Homo sapiens G protein-coupled recep... 32 3.1
AB065563-1|BAC05800.1| 353|Homo sapiens seven transmembrane hel... 32 3.1
X01793-1|CAA25926.1| 347|Homo sapiens haptoglobin protein. 31 5.4
X00637-1|CAA25267.1| 347|Homo sapiens haptoglobin alpha 1S prot... 31 5.4
X00606-1|CAA25248.1| 373|Homo sapiens hp2-alpha protein. 31 5.4
M69197-1|AAA88078.1| 406|Homo sapiens haptoglobin protein. 31 5.4
M10935-1|AAA88080.1| 406|Homo sapiens haptoglobin protein. 31 5.4
L29394-1|AAA52685.1| 406|Homo sapiens haptoglobin alpha(2FS)-be... 31 5.4
K01763-1|AAA52684.1| 347|Homo sapiens HP protein. 31 5.4
K00422-1|AAA52687.1| 406|Homo sapiens HP protein. 31 5.4
DQ314870-1|ABC40729.1| 406|Homo sapiens haptoglobin protein. 31 5.4
BC121125-1|AAI21126.1| 406|Homo sapiens haptoglobin protein. 31 5.4
BC121124-1|AAI21125.1| 347|Homo sapiens HP protein protein. 31 5.4
BC107587-1|AAI07588.1| 347|Homo sapiens HP protein protein. 31 5.4
AC004682-3|AAC27432.1| 345|Homo sapiens haptoglobin protein. 31 5.4
>X66113-1|CAA46904.1| 885|Homo sapiens PM/Scl 100kD nucleolar
protein protein.
Length = 885
Score = 158 bits (384), Expect = 2e-38
Identities = 71/144 (49%), Positives = 101/144 (70%)
Frame = +3
Query: 132 AVTQVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLKFLLMKYCGVDTDKTY 311
A+ +VFHGADSD+ WLQ+DFG+Y+V +FDT+ AA+ L L SL LL YC VD++K Y
Sbjct: 360 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQY 419
Query: 312 RLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCAS 491
+LADWRIRPLP+ ++ YAR DTHYLLY++ M+ ++ E+ GQ L V++ SR C
Sbjct: 420 QLADWRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPVQLQVVWQRSRDICLK 479
Query: 492 TYNKEVIHDESHIPLYIRSKKNFD 563
+ K + DES++ LY + KK+ +
Sbjct: 480 KFIKPIFTDESYLELYRKQKKHLN 503
>L01457-1|AAB59352.1| 860|Homo sapiens PM-Scl autoantigen protein.
Length = 860
Score = 158 bits (384), Expect = 2e-38
Identities = 71/144 (49%), Positives = 101/144 (70%)
Frame = +3
Query: 132 AVTQVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLKFLLMKYCGVDTDKTY 311
A+ +VFHGADSD+ WLQ+DFG+Y+V +FDT+ AA+ L L SL LL YC VD++K Y
Sbjct: 360 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQY 419
Query: 312 RLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCAS 491
+LADWRIRPLP+ ++ YAR DTHYLLY++ M+ ++ E+ GQ L V++ SR C
Sbjct: 420 QLADWRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPVQLQVVWQRSRDICLK 479
Query: 492 TYNKEVIHDESHIPLYIRSKKNFD 563
+ K + DES++ LY + KK+ +
Sbjct: 480 KFIKPIFTDESYLELYRKQKKHLN 503
>BC073788-1|AAH73788.1| 885|Homo sapiens exosome component 10
protein.
Length = 885
Score = 158 bits (384), Expect = 2e-38
Identities = 71/144 (49%), Positives = 101/144 (70%)
Frame = +3
Query: 132 AVTQVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLKFLLMKYCGVDTDKTY 311
A+ +VFHGADSD+ WLQ+DFG+Y+V +FDT+ AA+ L L SL LL YC VD++K Y
Sbjct: 360 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQY 419
Query: 312 RLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCAS 491
+LADWRIRPLP+ ++ YAR DTHYLLY++ M+ ++ E+ GQ L V++ SR C
Sbjct: 420 QLADWRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPVQLQVVWQRSRDICLK 479
Query: 492 TYNKEVIHDESHIPLYIRSKKNFD 563
+ K + DES++ LY + KK+ +
Sbjct: 480 KFIKPIFTDESYLELYRKQKKHLN 503
>BC039901-1|AAH39901.1| 885|Homo sapiens exosome component 10
protein.
Length = 885
Score = 158 bits (384), Expect = 2e-38
Identities = 71/144 (49%), Positives = 101/144 (70%)
Frame = +3
Query: 132 AVTQVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLKFLLMKYCGVDTDKTY 311
A+ +VFHGADSD+ WLQ+DFG+Y+V +FDT+ AA+ L L SL LL YC VD++K Y
Sbjct: 360 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQY 419
Query: 312 RLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCAS 491
+LADWRIRPLP+ ++ YAR DTHYLLY++ M+ ++ E+ GQ L V++ SR C
Sbjct: 420 QLADWRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPVQLQVVWQRSRDICLK 479
Query: 492 TYNKEVIHDESHIPLYIRSKKNFD 563
+ K + DES++ LY + KK+ +
Sbjct: 480 KFIKPIFTDESYLELYRKQKKHLN 503
>AL109811-9|CAI22106.1| 860|Homo sapiens exosome component 10
protein.
Length = 860
Score = 158 bits (384), Expect = 2e-38
Identities = 71/144 (49%), Positives = 101/144 (70%)
Frame = +3
Query: 132 AVTQVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLKFLLMKYCGVDTDKTY 311
A+ +VFHGADSD+ WLQ+DFG+Y+V +FDT+ AA+ L L SL LL YC VD++K Y
Sbjct: 360 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQY 419
Query: 312 RLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCAS 491
+LADWRIRPLP+ ++ YAR DTHYLLY++ M+ ++ E+ GQ L V++ SR C
Sbjct: 420 QLADWRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPVQLQVVWQRSRDICLK 479
Query: 492 TYNKEVIHDESHIPLYIRSKKNFD 563
+ K + DES++ LY + KK+ +
Sbjct: 480 KFIKPIFTDESYLELYRKQKKHLN 503
>AL109811-8|CAI22107.1| 885|Homo sapiens exosome component 10
protein.
Length = 885
Score = 158 bits (384), Expect = 2e-38
Identities = 71/144 (49%), Positives = 101/144 (70%)
Frame = +3
Query: 132 AVTQVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLKFLLMKYCGVDTDKTY 311
A+ +VFHGADSD+ WLQ+DFG+Y+V +FDT+ AA+ L L SL LL YC VD++K Y
Sbjct: 360 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQY 419
Query: 312 RLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCAS 491
+LADWRIRPLP+ ++ YAR DTHYLLY++ M+ ++ E+ GQ L V++ SR C
Sbjct: 420 QLADWRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPVQLQVVWQRSRDICLK 479
Query: 492 TYNKEVIHDESHIPLYIRSKKNFD 563
+ K + DES++ LY + KK+ +
Sbjct: 480 KFIKPIFTDESYLELYRKQKKHLN 503
>AJ300188-2|CAC15569.1| 860|Homo sapiens PM-scl autoantigen
protein.
Length = 860
Score = 158 bits (384), Expect = 2e-38
Identities = 71/144 (49%), Positives = 101/144 (70%)
Frame = +3
Query: 132 AVTQVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLKFLLMKYCGVDTDKTY 311
A+ +VFHGADSD+ WLQ+DFG+Y+V +FDT+ AA+ L L SL LL YC VD++K Y
Sbjct: 360 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQY 419
Query: 312 RLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCAS 491
+LADWRIRPLP+ ++ YAR DTHYLLY++ M+ ++ E+ GQ L V++ SR C
Sbjct: 420 QLADWRIRPLPEEMLSYARDDTHYLLYIYDKMRLEMWERGNGQPVQLQVVWQRSRDICLK 479
Query: 492 TYNKEVIHDESHIPLYIRSKKNFD 563
+ K + DES++ LY + KK+ +
Sbjct: 480 KFIKPIFTDESYLELYRKQKKHLN 503
>AB209236-1|BAD92473.1| 431|Homo sapiens exosome component 10
isoform 2 variant protein.
Length = 431
Score = 95.1 bits (226), Expect = 3e-19
Identities = 41/68 (60%), Positives = 53/68 (77%)
Frame = +3
Query: 132 AVTQVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLKFLLMKYCGVDTDKTY 311
A+ +VFHGADSD+ WLQ+DFG+Y+V +FDT+ AA+ L L SL LL YC VD++K Y
Sbjct: 359 AIVKVFHGADSDIEWLQKDFGLYVVNMFDTHQAARLLNLGRHSLDHLLKLYCNVDSNKQY 418
Query: 312 RLADWRIR 335
+LADWRIR
Sbjct: 419 QLADWRIR 426
>AK094438-1|BAC04356.1| 758|Homo sapiens protein ( Homo sapiens
cDNA FLJ37119 fis, clone BRACE2022333. ).
Length = 758
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 261 LKFLLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVM 407
L L+ + G DKT +L++W RPL + + YA D + LL V + +
Sbjct: 518 LSLLVQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEVHQAL 566
>AK055004-1|BAB70838.1| 599|Homo sapiens protein ( Homo sapiens
cDNA FLJ30442 fis, clone BRACE2009212. ).
Length = 599
Score = 34.7 bits (76), Expect = 0.44
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 261 LKFLLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVM 407
L L+ + G DKT +L++W RPL + + YA D + LL V + +
Sbjct: 241 LSLLVQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEVHQAL 289
>AB061798-1|BAC10986.1| 514|Homo sapiens HBE269 protein.
Length = 514
Score = 34.3 bits (75), Expect = 0.58
Identities = 17/49 (34%), Positives = 27/49 (55%)
Frame = +3
Query: 261 LKFLLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVM 407
L L+ + G DKT +L++W RPL + + YA D + LL V + +
Sbjct: 198 LTLLVQQVLGTALDKTQQLSNWDRRPLYEEQVIYAAADAYCLLEVHQAL 246
>BC032831-1|AAH32831.2| 494|Homo sapiens G protein-coupled receptor
135 protein.
Length = 494
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 228 AAKSLGLPALS--LKFLLMKYCGVDTDKTYRLADWRIRPL 341
AA S+GL L FLLM +C KT RL+D R+RP+
Sbjct: 275 AAFSVGLVVACYLLPFLLMCFCHYHICKTVRLSDVRVRPV 314
>AY288418-1|AAP72127.1| 494|Homo sapiens G protein-coupled receptor
135 protein.
Length = 494
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 228 AAKSLGLPALS--LKFLLMKYCGVDTDKTYRLADWRIRPL 341
AA S+GL L FLLM +C KT RL+D R+RP+
Sbjct: 275 AAFSVGLVVACYLLPFLLMCFCHYHICKTVRLSDVRVRPV 314
>AB065563-1|BAC05800.1| 353|Homo sapiens seven transmembrane helix
receptor protein.
Length = 353
Score = 31.9 bits (69), Expect = 3.1
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 2/40 (5%)
Frame = +3
Query: 228 AAKSLGLPALS--LKFLLMKYCGVDTDKTYRLADWRIRPL 341
AA S+GL L FLLM +C KT RL+D R+RP+
Sbjct: 263 AAFSVGLVVACYLLPFLLMCFCHYHICKTVRLSDVRVRPV 302
>X01793-1|CAA25926.1| 347|Homo sapiens haptoglobin protein.
Length = 347
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 31 DGCPKPPEIAHGYVEHSVR 49
>X00637-1|CAA25267.1| 347|Homo sapiens haptoglobin alpha 1S
protein.
Length = 347
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 31 DGCPKPPEIAHGYVEHSVR 49
>X00606-1|CAA25248.1| 373|Homo sapiens hp2-alpha protein.
Length = 373
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 29 DGCPKPPEIAHGYVEHSVR 47
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 88 DGCPKPPEIAHGYVEHSVR 106
>M69197-1|AAA88078.1| 406|Homo sapiens haptoglobin protein.
Length = 406
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 31 DGCPKPPEIAHGYVEHSVR 49
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 90 DGCPKPPEIAHGYVEHSVR 108
>M10935-1|AAA88080.1| 406|Homo sapiens haptoglobin protein.
Length = 406
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 31 DGCPKPPEIAHGYVEHSVR 49
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 90 DGCPKPPEIAHGYVEHSVR 108
>L29394-1|AAA52685.1| 406|Homo sapiens haptoglobin alpha(2FS)-beta
precursor protein.
Length = 406
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 31 DGCPKPPEIAHGYVEHSVR 49
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 90 DGCPKPPEIAHGYVEHSVR 108
>K01763-1|AAA52684.1| 347|Homo sapiens HP protein.
Length = 347
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 31 DGCPKPPEIAHGYVEHSVR 49
>K00422-1|AAA52687.1| 406|Homo sapiens HP protein.
Length = 406
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 31 DGCPKPPEIAHGYVEHSVR 49
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 90 DGCPKPPEIAHGYVEHSVR 108
>DQ314870-1|ABC40729.1| 406|Homo sapiens haptoglobin protein.
Length = 406
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 31 DGCPKPPEIAHGYVEHSVR 49
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 90 DGCPKPPEIAHGYVEHSVR 108
>BC121125-1|AAI21126.1| 406|Homo sapiens haptoglobin protein.
Length = 406
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 31 DGCPKPPEIAHGYVEHSVR 49
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 90 DGCPKPPEIAHGYVEHSVR 108
>BC121124-1|AAI21125.1| 347|Homo sapiens HP protein protein.
Length = 347
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 31 DGCPKPPEIAHGYVEHSVR 49
>BC107587-1|AAI07588.1| 347|Homo sapiens HP protein protein.
Length = 347
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 31 DGCPKPPEIAHGYVEHSVR 49
>AC004682-3|AAC27432.1| 345|Homo sapiens haptoglobin protein.
Length = 345
Score = 31.1 bits (67), Expect = 5.4
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = -2
Query: 477 DGCPRRPTVAYSFVQHSSR 421
DGCP+ P +A+ +V+HS R
Sbjct: 29 DGCPKPPEIAHGYVEHSVR 47
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,511,919
Number of Sequences: 237096
Number of extensions: 2223956
Number of successful extensions: 7801
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 7663
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7801
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10984231046
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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