Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_K19
         (862 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z49909-4|CAA90108.1|  876|Caenorhabditis elegans Hypothetical pr...   136   1e-32
AY303577-1|AAP57299.1|  876|Caenorhabditis elegans cell death-re...   136   1e-32
Z49909-5|CAD59140.1|  594|Caenorhabditis elegans Hypothetical pr...    59   5e-09
Z22176-7|CAA80137.1|  910|Caenorhabditis elegans Hypothetical pr...    34   0.11 
AL117195-9|CAB55016.2|  710|Caenorhabditis elegans Hypothetical ...    34   0.15 
Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical pr...    29   3.2  
U23182-2|ABD94105.1|  441|Caenorhabditis elegans Hypothetical pr...    29   5.6  
U23182-1|ABD94104.1|  468|Caenorhabditis elegans Hypothetical pr...    29   5.6  
U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical pr...    28   7.4  
Z82069-3|CAB04908.1|  129|Caenorhabditis elegans Hypothetical pr...    28   9.8  
Z22176-11|CAA80141.1|  784|Caenorhabditis elegans Hypothetical p...    28   9.8  

>Z49909-4|CAA90108.1|  876|Caenorhabditis elegans Hypothetical
           protein C14A4.4a protein.
          Length = 876

 Score =  136 bits (330), Expect = 1e-32
 Identities = 61/132 (46%), Positives = 90/132 (68%)
 Frame = +3

Query: 135 VTQVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLKFLLMKYCGVDTDKTYR 314
           + +VFHG+DSDVLWLQRD+GV++V LFDTY A K L  P  SL +L +++  V  DK Y+
Sbjct: 351 ILKVFHGSDSDVLWLQRDYGVHVVNLFDTYVAMKKLKYPKFSLAYLTLRFADVVLDKQYQ 410

Query: 315 LADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCAST 494
           LADWR RPL + +I YAR DTHYLLY + +++ Q+++++   T  L +V+ +S   C   
Sbjct: 411 LADWRARPLRNAMINYAREDTHYLLYSYDMLREQLLKQD---TKDLANVYSESSDLCIKV 467

Query: 495 YNKEVIHDESHI 530
           Y K V + + ++
Sbjct: 468 YKKPVFNPKGYL 479


>AY303577-1|AAP57299.1|  876|Caenorhabditis elegans cell
           death-related nuclease 3 protein.
          Length = 876

 Score =  136 bits (330), Expect = 1e-32
 Identities = 61/132 (46%), Positives = 90/132 (68%)
 Frame = +3

Query: 135 VTQVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSLGLPALSLKFLLMKYCGVDTDKTYR 314
           + +VFHG+DSDVLWLQRD+GV++V LFDTY A K L  P  SL +L +++  V  DK Y+
Sbjct: 351 ILKVFHGSDSDVLWLQRDYGVHVVNLFDTYVAMKKLKYPKFSLAYLTLRFADVVLDKQYQ 410

Query: 315 LADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNAGQTNMLLSVFEDSRQTCAST 494
           LADWR RPL + +I YAR DTHYLLY + +++ Q+++++   T  L +V+ +S   C   
Sbjct: 411 LADWRARPLRNAMINYAREDTHYLLYSYDMLREQLLKQD---TKDLANVYSESSDLCIKV 467

Query: 495 YNKEVIHDESHI 530
           Y K V + + ++
Sbjct: 468 YKKPVFNPKGYL 479


>Z49909-5|CAD59140.1|  594|Caenorhabditis elegans Hypothetical
           protein C14A4.4b protein.
          Length = 594

 Score = 58.8 bits (136), Expect = 5e-09
 Identities = 24/36 (66%), Positives = 30/36 (83%)
 Frame = +3

Query: 135 VTQVFHGADSDVLWLQRDFGVYLVGLFDTYHAAKSL 242
           + +VFHG+DSDVLWLQRD+GV++V LFDTY   K L
Sbjct: 351 ILKVFHGSDSDVLWLQRDYGVHVVNLFDTYVKVKKL 386


>Z22176-7|CAA80137.1|  910|Caenorhabditis elegans Hypothetical
           protein ZK1098.8 protein.
          Length = 910

 Score = 34.3 bits (75), Expect = 0.11
 Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
 Frame = +3

Query: 240 LGLPALSLKFL-LMKYC-GVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKN 413
           L LP  + K   L  Y  G++ DKT + ++W+ RPL    I YA +D   ++  ++ + +
Sbjct: 543 LELPKKTFKLADLTHYLLGLELDKTEQCSNWQCRPLRKKQIVYAALDAVVVVETFKKILS 602

Query: 414 QIIEKN 431
            + EKN
Sbjct: 603 IVEEKN 608


>AL117195-9|CAB55016.2|  710|Caenorhabditis elegans Hypothetical
           protein Y57A10A.13 protein.
          Length = 710

 Score = 33.9 bits (74), Expect = 0.15
 Identities = 16/46 (34%), Positives = 26/46 (56%)
 Frame = +3

Query: 261 LKFLLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVW 398
           L F+  K  G   DKT + + W  RPL  + ++YA MD + +L ++
Sbjct: 629 LSFICEKLLGRPLDKTEQCSVWDRRPLRCLQLRYAAMDAYCMLLLY 674


>Z81110-5|CAN86897.1| 2882|Caenorhabditis elegans Hypothetical
           protein T01D3.7 protein.
          Length = 2882

 Score = 29.5 bits (63), Expect = 3.2
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +3

Query: 405 MKNQIIEKNAGQTNMLLSVFEDSRQTCASTYN 500
           + N II  N+   ++  ++F+D R TC  TYN
Sbjct: 227 LANSIITTNSVNISISENLFQDKRSTCEITYN 258


>U23182-2|ABD94105.1|  441|Caenorhabditis elegans Hypothetical
           protein F40B5.2b protein.
          Length = 441

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/62 (25%), Positives = 32/62 (51%)
 Frame = +1

Query: 118 IHTWRQSHRCSTVPIAMFFGFNVISACIWWVFSTHTTQPSH*VCPRFRSNFF**SIAALT 297
           +HT+ + +RC  + +A+  GF  + A ++   +    + +     RF+SN    SIA L+
Sbjct: 155 VHTYLKENRCYHILLALILGFIFMFAGLYTTHTDPIVRSASIPMKRFQSNSGNVSIALLS 214

Query: 298 PI 303
            +
Sbjct: 215 DV 216


>U23182-1|ABD94104.1|  468|Caenorhabditis elegans Hypothetical
           protein F40B5.2a protein.
          Length = 468

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 16/62 (25%), Positives = 32/62 (51%)
 Frame = +1

Query: 118 IHTWRQSHRCSTVPIAMFFGFNVISACIWWVFSTHTTQPSH*VCPRFRSNFF**SIAALT 297
           +HT+ + +RC  + +A+  GF  + A ++   +    + +     RF+SN    SIA L+
Sbjct: 182 VHTYLKENRCYHILLALILGFIFMFAGLYTTHTDPIVRSASIPMKRFQSNSGNVSIALLS 241

Query: 298 PI 303
            +
Sbjct: 242 DV 243


>U58760-5|AAK31464.1| 1076|Caenorhabditis elegans Hypothetical
           protein C27A2.1 protein.
          Length = 1076

 Score = 28.3 bits (60), Expect = 7.4
 Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
 Frame = +3

Query: 357 KYARMDTHYLLYVWRVMKNQII-EKNAGQTNMLLSVFEDSRQTCASTYNKEVIHDESH 527
           +YA ++   +L   ++++N I   K     + L+ +FE S   C S  NK     E+H
Sbjct: 705 EYANVEKKAILETKKMLENSIRWHKEIIDKHRLIGIFELSESICKSRVNKSNSEAETH 762


>Z82069-3|CAB04908.1|  129|Caenorhabditis elegans Hypothetical
           protein W04A8.4 protein.
          Length = 129

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 19/72 (26%), Positives = 34/72 (47%)
 Frame = +3

Query: 255 LSLKFLLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWRVMKNQIIEKNA 434
           LSLK     + G+D  K   ++DW    L    ++YA MDT   + +  ++K ++   + 
Sbjct: 53  LSLKAEATYWTGLDLHKGETMSDWTNTHLRGDQLRYAIMDT---IVMHLIIKQRLRNIHK 109

Query: 435 GQTNMLLSVFED 470
               +   VFE+
Sbjct: 110 NDPRLFQYVFEN 121


>Z22176-11|CAA80141.1|  784|Caenorhabditis elegans Hypothetical
           protein ZK1098.3 protein.
          Length = 784

 Score = 27.9 bits (59), Expect = 9.8
 Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
 Frame = +3

Query: 237 SLGLPALSLKFLLMKYCGVDTDKTYRLADWRIRPLPDVLIKYARMDTHYLLYVWR----- 401
           +L      L  L     G+  DK+ +  +W+ RPL    I YA MD   +  V++     
Sbjct: 559 NLSTKTSKLSVLADHLVGLKMDKSEQCGNWQCRPLRRNQIIYAVMDAVAVFEVFQKIVEV 618

Query: 402 VMKNQI-IEKNAGQTNMLLSVFEDSRQTC 485
           V K+++  EK   +++M+    E  R+ C
Sbjct: 619 VRKHELDAEKLLVESHMITVKKEKVRRDC 647


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,442,743
Number of Sequences: 27780
Number of extensions: 354976
Number of successful extensions: 1021
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1019
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)