Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_K17
         (846 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF023454-1|AAB82794.1|  707|Caenorhabditis elegans protein phosp...    32   0.59 
AF003389-11|AAC71139.2|  707|Caenorhabditis elegans Phosphatase ...    32   0.59 
AC084158-26|AAM15621.2|  216|Caenorhabditis elegans Hypothetical...    30   2.4  
AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical...    30   2.4  
U88168-5|AAM98000.1|  112|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical pr...    29   5.5  
Z36753-13|CAA85331.1|  598|Caenorhabditis elegans Hypothetical p...    29   5.5  

>AF023454-1|AAB82794.1|  707|Caenorhabditis elegans protein
           phosphatase with EF-hands protein.
          Length = 707

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
 Frame = +1

Query: 514 TTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKP---SLSRNTNHNLNTSLXPQPRXS 684
           TT +T  S  N       N   S  N  + S + K      S+ +N   N S  PQP+ +
Sbjct: 23  TTTTTSSSQRNNYNDNNQNTSSSSGNKKESSSSSKQHSSKKSKKSNSKKNRSPSPQPQLT 82

Query: 685 ISTSVPIYQYLYRC 726
           I +++ I ++  RC
Sbjct: 83  IKSAILIQKWYRRC 96


>AF003389-11|AAC71139.2|  707|Caenorhabditis elegans Phosphatase
           with ef hands protein1, isoform a protein.
          Length = 707

 Score = 31.9 bits (69), Expect = 0.59
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 3/74 (4%)
 Frame = +1

Query: 514 TTDSTILSYTNKRTTQLHNRDISLNNSTKLSHNIKP---SLSRNTNHNLNTSLXPQPRXS 684
           TT +T  S  N       N   S  N  + S + K      S+ +N   N S  PQP+ +
Sbjct: 23  TTTTTSSSQRNNYNDNNQNTSSSSGNKKESSSSSKQHSSKKSKKSNSKKNRSPSPQPQLT 82

Query: 685 ISTSVPIYQYLYRC 726
           I +++ I ++  RC
Sbjct: 83  IKSAILIQKWYRRC 96


>AC084158-26|AAM15621.2|  216|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.32b protein.
          Length = 216

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 83  VAVSCQQHEGARRVPKYAGDPKTAAIVQEARYLSGNGAFG 202
           V  +  +H G  R P+Y+ DP + +   + R L  +GA+G
Sbjct: 39  VTSTSNEHVGQFRRPRYSADPTSNSTDLQLRPLDAHGAYG 78


>AC084158-25|AAM15620.2|  384|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.32a protein.
          Length = 384

 Score = 29.9 bits (64), Expect = 2.4
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +2

Query: 83  VAVSCQQHEGARRVPKYAGDPKTAAIVQEARYLSGNGAFG 202
           V  +  +H G  R P+Y+ DP + +   + R L  +GA+G
Sbjct: 207 VTSTSNEHVGQFRRPRYSADPTSNSTDLQLRPLDAHGAYG 246


>U88168-5|AAM98000.1|  112|Caenorhabditis elegans Hypothetical
           protein K11H12.8b protein.
          Length = 112

 Score = 29.1 bits (62), Expect = 4.2
 Identities = 14/37 (37%), Positives = 18/37 (48%)
 Frame = +2

Query: 164 QEARYLSGNGAFGAAYQQEDGINFKEETDAEGNRKGS 274
           + ARY  G   FG+   Q  GI     T+AEG   G+
Sbjct: 28  KSARYGGGQSGFGSRVNQSSGIRSSHWTNAEGATFGT 64


>Z78419-9|CAB01707.1| 1153|Caenorhabditis elegans Hypothetical protein
            F29D11.2 protein.
          Length = 1153

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 535  SYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSR 633
            S TNKR   L + DI+++N   +  + KP  SR
Sbjct: 1049 SKTNKRNANLISTDIAVDNDVNMEEDDKPGPSR 1081


>Z73907-3|CAA98126.1| 1153|Caenorhabditis elegans Hypothetical protein
            F29D11.2 protein.
          Length = 1153

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 13/33 (39%), Positives = 19/33 (57%)
 Frame = +1

Query: 535  SYTNKRTTQLHNRDISLNNSTKLSHNIKPSLSR 633
            S TNKR   L + DI+++N   +  + KP  SR
Sbjct: 1049 SKTNKRNANLISTDIAVDNDVNMEEDDKPGPSR 1081


>Z36753-13|CAA85331.1|  598|Caenorhabditis elegans Hypothetical
           protein T09A5.2a protein.
          Length = 598

 Score = 28.7 bits (61), Expect = 5.5
 Identities = 10/33 (30%), Positives = 22/33 (66%)
 Frame = +1

Query: 547 KRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNH 645
           ++  QLHN+ + LN + ++ + I+P L+  T++
Sbjct: 230 EKRKQLHNQLVELNGNIRVFYRIRPQLASETDN 262


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,513,775
Number of Sequences: 27780
Number of extensions: 280171
Number of successful extensions: 972
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 906
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 971
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2098003600
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)