Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_K17
(846 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle pr... 43 4e-06
AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex det... 24 1.5
DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex det... 23 2.7
DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex det... 23 2.7
DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex det... 23 2.7
AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein. 23 2.7
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 3.5
AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate r... 22 6.2
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 22 8.2
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 22 8.2
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 8.2
>EF531707-1|ABP57431.1| 138|Apis mellifera structural cuticle
protein protein.
Length = 138
Score = 42.7 bits (96), Expect = 4e-06
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 7/82 (8%)
Frame = +2
Query: 137 GDPKTAAIVQEARYLSGNGAFGAAYQQEDGINFKE-----ETDAEGN--RKGSYSYIDPS 295
G K A I + ++ +G + ++ +GI+ +E + D E +GS SY P
Sbjct: 22 GADKDAVITSQQLEVNFDGNYINNFETSNGISHQESGQPKQVDNETPVVSQGSDSYTAPD 81
Query: 296 GQRKTVNYIAGKNGFQAVGDHI 361
GQ+ ++ Y+A +NGFQ G HI
Sbjct: 82 GQQVSITYVADENGFQVQGSHI 103
>AY350617-1|AAQ57659.1| 428|Apis mellifera complementary sex
determiner protein.
Length = 428
Score = 24.2 bits (50), Expect = 1.5
Identities = 12/38 (31%), Positives = 20/38 (52%)
Frame = +1
Query: 547 KRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNHNLNTS 660
K + L N+ I NN+ K ++N + N N+N N +
Sbjct: 313 KIISSLSNKTIHNNNNYKYNYNNNNYNNNNYNNNYNNN 350
>DQ325124-1|ABD14138.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 547 KRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNHNLN 654
+ T++ +RD +K H I SLS N N+N N
Sbjct: 60 RETSKERSRDRKEREKSK-EHKIISSLSNNYNYNNN 94
>DQ325123-1|ABD14137.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 547 KRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNHNLN 654
+ T++ +RD +K H I SLS N N+N N
Sbjct: 60 RETSKERSRDRKEREKSK-EHKIISSLSNNYNYNNN 94
>DQ325122-1|ABD14136.1| 179|Apis mellifera complementary sex
determiner protein.
Length = 179
Score = 23.4 bits (48), Expect = 2.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 547 KRTTQLHNRDISLNNSTKLSHNIKPSLSRNTNHNLN 654
+ T++ +RD +K H I SLS N N+N N
Sbjct: 60 RETSKERSRDRKEREKSK-EHKIISSLSNNYNYNNN 94
>AY898652-1|AAX83121.1| 349|Apis mellifera AKH receptor protein.
Length = 349
Score = 23.4 bits (48), Expect = 2.7
Identities = 8/21 (38%), Positives = 16/21 (76%)
Frame = +2
Query: 44 FKMYRLIVSAFVIVAVSCQQH 106
F+M+ L +S+FV+V +S ++
Sbjct: 117 FRMFGLYLSSFVLVCISMDRY 137
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 23.0 bits (47), Expect = 3.5
Identities = 10/25 (40%), Positives = 14/25 (56%)
Frame = +1
Query: 586 NNSTKLSHNIKPSLSRNTNHNLNTS 660
NNST + N + S N N+N N +
Sbjct: 224 NNSTITAGNANTNASNNNNNNNNNN 248
>AY331183-1|AAP94623.1| 953|Apis mellifera NMDA-type glutamate
receptor 1 protein.
Length = 953
Score = 22.2 bits (45), Expect = 6.2
Identities = 8/23 (34%), Positives = 14/23 (60%)
Frame = -1
Query: 675 GLGXQAGIEVVVGIAAEAGLDIV 607
GL AG+ +VVG+ G+ ++
Sbjct: 819 GLKNMAGVFIVVGVGIIGGIGLI 841
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 595 TKLSHNIKPSLSRNTNHNLNTS 660
+ LS+N K S N N+N NT+
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTN 104
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 595 TKLSHNIKPSLSRNTNHNLNTS 660
+ LS+N K S N N+N NT+
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTN 104
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 595 TKLSHNIKPSLSRNTNHNLNTS 660
+ LS+N K S N N+N NT+
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTN 104
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 595 TKLSHNIKPSLSRNTNHNLNTS 660
+ LS+N K S N N+N NT+
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTN 104
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 595 TKLSHNIKPSLSRNTNHNLNTS 660
+ LS+N K S N N+N NT+
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTN 104
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 595 TKLSHNIKPSLSRNTNHNLNTS 660
+ LS+N K S N N+N NT+
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTN 104
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.8 bits (44), Expect = 8.2
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = +1
Query: 595 TKLSHNIKPSLSRNTNHNLNTS 660
+ LS+N K S N N+N NT+
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTN 104
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.8 bits (44), Expect = 8.2
Identities = 6/11 (54%), Positives = 10/11 (90%)
Frame = +3
Query: 423 LQITRHHNIVR 455
LQ+T+HHN ++
Sbjct: 123 LQMTKHHNFIK 133
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 180,339
Number of Sequences: 438
Number of extensions: 3934
Number of successful extensions: 30
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27188448
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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