Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_K13
(879 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118883-1|AAM50743.1| 475|Drosophila melanogaster HL01686p pro... 86 7e-17
AY069852-1|AAL39997.1| 407|Drosophila melanogaster SD10272p pro... 86 7e-17
AF521598-1|AAN62854.1| 400|Drosophila melanogaster MSP-300/nesp... 86 7e-17
AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE... 86 7e-17
AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB... 86 7e-17
AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-P... 86 7e-17
X75886-1|CAA53480.1| 621|Drosophila melanogaster nuclear lamin ... 33 0.52
L07933-1|AAA28666.1| 621|Drosophila melanogaster lamin C like p... 33 0.52
AY095046-1|AAM11374.1| 621|Drosophila melanogaster LD31805p pro... 33 0.52
AE013599-1908|AAF58237.1| 621|Drosophila melanogaster CG10119-P... 33 0.52
>AY118883-1|AAM50743.1| 475|Drosophila melanogaster HL01686p
protein.
Length = 475
Score = 85.8 bits (203), Expect = 7e-17
Identities = 43/99 (43%), Positives = 59/99 (59%)
Frame = +2
Query: 44 ELAEEWERCERKLKDVGHWLEATTRTLETPQNAKKPLRDRLALREKIINDISTQKTKISY 223
E EEW++CERK+KD+ W E T + L++ Q KKPLRD+L EK + DI+ QKTK+
Sbjct: 219 EACEEWDQCERKIKDIRSWHEKTKQGLDSSQQQKKPLRDQLGFCEKTLADINVQKTKLRL 278
Query: 224 AVEKLNVHFGPDGVAAQSVGPEGVEANARQLTEALDAAG 340
++EKL VHF +G+ G + N L LD G
Sbjct: 279 SIEKLEVHF-RNGMG----GDPRLSENVDDLVRVLDGLG 312
>AY069852-1|AAL39997.1| 407|Drosophila melanogaster SD10272p
protein.
Length = 407
Score = 85.8 bits (203), Expect = 7e-17
Identities = 43/99 (43%), Positives = 59/99 (59%)
Frame = +2
Query: 44 ELAEEWERCERKLKDVGHWLEATTRTLETPQNAKKPLRDRLALREKIINDISTQKTKISY 223
E EEW++CERK+KD+ W E T + L++ Q KKPLRD+L EK + DI+ QKTK+
Sbjct: 219 EACEEWDQCERKIKDIRSWHEKTKQGLDSSQQQKKPLRDQLGFCEKTLADINVQKTKLRL 278
Query: 224 AVEKLNVHFGPDGVAAQSVGPEGVEANARQLTEALDAAG 340
++EKL VHF +G+ G + N L LD G
Sbjct: 279 SIEKLEVHF-RNGMG----GDPRLSENVDDLVRVLDGLG 312
>AF521598-1|AAN62854.1| 400|Drosophila melanogaster MSP-300/nesprin
splice variant protein.
Length = 400
Score = 85.8 bits (203), Expect = 7e-17
Identities = 43/99 (43%), Positives = 59/99 (59%)
Frame = +2
Query: 44 ELAEEWERCERKLKDVGHWLEATTRTLETPQNAKKPLRDRLALREKIINDISTQKTKISY 223
E EEW++CERK+KD+ W E T + L++ Q KKPLRD+L EK + DI+ QKTK+
Sbjct: 95 EACEEWDQCERKIKDIRSWHEKTKQGLDSSQQQKKPLRDQLGFCEKTLADINVQKTKLRL 154
Query: 224 AVEKLNVHFGPDGVAAQSVGPEGVEANARQLTEALDAAG 340
++EKL VHF +G+ G + N L LD G
Sbjct: 155 SIEKLEVHF-RNGMG----GDPRLSENVDDLVRVLDGLG 188
>AE014134-887|AAZ66448.1| 9606|Drosophila melanogaster CG33715-PE,
isoform E protein.
Length = 9606
Score = 85.8 bits (203), Expect = 7e-17
Identities = 43/99 (43%), Positives = 59/99 (59%)
Frame = +2
Query: 44 ELAEEWERCERKLKDVGHWLEATTRTLETPQNAKKPLRDRLALREKIINDISTQKTKISY 223
E EEW++CERK+KD+ W E T + L++ Q KKPLRD+L EK + DI+ QKTK+
Sbjct: 219 EACEEWDQCERKIKDIRSWHEKTKQGLDSSQQQKKPLRDQLGFCEKTLADINVQKTKLRL 278
Query: 224 AVEKLNVHFGPDGVAAQSVGPEGVEANARQLTEALDAAG 340
++EKL VHF +G+ G + N L LD G
Sbjct: 279 SIEKLEVHF-RNGMG----GDPRLSENVDDLVRVLDGLG 312
>AE014134-886|AAZ66447.1| 7744|Drosophila melanogaster CG33715-PB,
isoform B protein.
Length = 7744
Score = 85.8 bits (203), Expect = 7e-17
Identities = 43/99 (43%), Positives = 59/99 (59%)
Frame = +2
Query: 44 ELAEEWERCERKLKDVGHWLEATTRTLETPQNAKKPLRDRLALREKIINDISTQKTKISY 223
E EEW++CERK+KD+ W E T + L++ Q KKPLRD+L EK + DI+ QKTK+
Sbjct: 7556 EACEEWDQCERKIKDIRSWHEKTKQGLDSSQQQKKPLRDQLGFCEKTLADINVQKTKLRL 7615
Query: 224 AVEKLNVHFGPDGVAAQSVGPEGVEANARQLTEALDAAG 340
++EKL VHF +G+ G + N L LD G
Sbjct: 7616 SIEKLEVHF-RNGMG----GDPRLSENVDDLVRVLDGLG 7649
>AE014134-885|AAZ66446.1| 11707|Drosophila melanogaster CG33715-PD,
isoform D protein.
Length = 11707
Score = 85.8 bits (203), Expect = 7e-17
Identities = 43/99 (43%), Positives = 59/99 (59%)
Frame = +2
Query: 44 ELAEEWERCERKLKDVGHWLEATTRTLETPQNAKKPLRDRLALREKIINDISTQKTKISY 223
E EEW++CERK+KD+ W E T + L++ Q KKPLRD+L EK + DI+ QKTK+
Sbjct: 7556 EACEEWDQCERKIKDIRSWHEKTKQGLDSSQQQKKPLRDQLGFCEKTLADINVQKTKLRL 7615
Query: 224 AVEKLNVHFGPDGVAAQSVGPEGVEANARQLTEALDAAG 340
++EKL VHF +G+ G + N L LD G
Sbjct: 7616 SIEKLEVHF-RNGMG----GDPRLSENVDDLVRVLDGLG 7649
>X75886-1|CAA53480.1| 621|Drosophila melanogaster nuclear lamin C
protein protein.
Length = 621
Score = 33.1 bits (72), Expect = 0.52
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 44 ELAEEWERCERKLKDVGHWLEATTRTLETPQNAKKPLRDRLALREKI 184
ELA E ER R+L D+ LEA T +N + LR+ LA ++++
Sbjct: 179 ELALENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQV 225
>L07933-1|AAA28666.1| 621|Drosophila melanogaster lamin C like
protein protein.
Length = 621
Score = 33.1 bits (72), Expect = 0.52
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 44 ELAEEWERCERKLKDVGHWLEATTRTLETPQNAKKPLRDRLALREKI 184
ELA E ER R+L D+ LEA T +N + LR+ LA ++++
Sbjct: 179 ELALENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQV 225
>AY095046-1|AAM11374.1| 621|Drosophila melanogaster LD31805p
protein.
Length = 621
Score = 33.1 bits (72), Expect = 0.52
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 44 ELAEEWERCERKLKDVGHWLEATTRTLETPQNAKKPLRDRLALREKI 184
ELA E ER R+L D+ LEA T +N + LR+ LA ++++
Sbjct: 179 ELALENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQV 225
>AE013599-1908|AAF58237.1| 621|Drosophila melanogaster CG10119-PA
protein.
Length = 621
Score = 33.1 bits (72), Expect = 0.52
Identities = 18/47 (38%), Positives = 27/47 (57%)
Frame = +2
Query: 44 ELAEEWERCERKLKDVGHWLEATTRTLETPQNAKKPLRDRLALREKI 184
ELA E ER R+L D+ LEA T +N + LR+ LA ++++
Sbjct: 179 ELALENERLRRQLDDLRKQLEAETLARVDLENQNQSLREELAFKDQV 225
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,981,680
Number of Sequences: 53049
Number of extensions: 262366
Number of successful extensions: 870
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 855
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 870
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4270708416
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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