Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= FWDP02_FL5_K11
(840 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0064 + 14592534-14592880,14593327-14593576 33 0.28
08_02_1308 - 26024491-26025405 31 0.86
08_02_1309 - 26029691-26030609,26030850-26030925,26032198-26032579 31 1.5
02_02_0620 + 12210812-12210997,12212397-12212474,12212744-122128... 31 1.5
08_01_0799 + 7734031-7735102,7735453-7735475 29 3.5
05_03_0604 - 16132173-16132391,16132488-16132556,16132824-161328... 29 3.5
10_06_0142 - 11175732-11176545,11176924-11177450,11177544-111777... 29 4.6
10_02_0166 - 6065088-6065093,6066671-6068544,6068643-6069548,606... 29 4.6
10_02_0129 + 5584585-5584732,5586567-5586968,5587038-5587106,558... 29 4.6
08_02_1367 + 26432425-26432622,26434071-26434162,26434337-264344... 29 4.6
07_01_0456 - 3461827-3462261,3462542-3462670,3462777-3462897,346... 29 4.6
04_04_1221 + 31845938-31847038 29 4.6
10_08_0122 - 14982676-14983043,14983957-14985145 29 6.1
08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546 29 6.1
10_01_0051 - 741031-741820,742998-743530,743616-743833,743941-74... 28 8.1
07_01_0322 - 2258067-2258519,2258620-2258781,2258896-2259159,225... 28 8.1
05_01_0599 + 5368091-5368123,5368212-5368383,5369237-5369335,536... 28 8.1
>10_08_0064 + 14592534-14592880,14593327-14593576
Length = 198
Score = 33.1 bits (72), Expect = 0.28
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 9/85 (10%)
Frame = +1
Query: 373 LPGLLRDLQRLSEDIDTADIVFILGANEEKCYAHRIILIARCKSF---------QYTKRG 525
LP L RD++ L + + AD+ F +G E AHR +L AR F + T G
Sbjct: 20 LPELNRDMEALLQSEEGADVTFEVGG--ESFAAHRCVLAARSSVFRAELFGAMKESTAGG 77
Query: 526 EICRVPGLYGYAICWRTADTYTDAA 600
RV G+ A YTDAA
Sbjct: 78 GKARVDGVEARAFKALLHFIYTDAA 102
>08_02_1308 - 26024491-26025405
Length = 304
Score = 31.5 bits (68), Expect = 0.86
Identities = 15/40 (37%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 587 IRMPHIQPETFRLFIQYVYTGKLLLQDSG-VFEMMTLAAD 703
I + I+P TFR ++++YT KL D G +M +A D
Sbjct: 169 ITLHDIEPLTFRALLRFIYTDKLPADDGGDQLKMAAMATD 208
>08_02_1309 - 26029691-26030609,26030850-26030925,26032198-26032579
Length = 458
Score = 30.7 bits (66), Expect = 1.5
Identities = 13/39 (33%), Positives = 21/39 (53%)
Frame = +2
Query: 587 IRMPHIQPETFRLFIQYVYTGKLLLQDSGVFEMMTLAAD 703
I + I+P TFR +++VYT +L D G +A +
Sbjct: 315 ITLHDIEPVTFRALLRFVYTDELPADDGGELNTTAMATE 353
>02_02_0620 +
12210812-12210997,12212397-12212474,12212744-12212848,
12212998-12213022,12213214-12213266,12213523-12213635,
12213777-12213801,12214560-12214601,12214666-12214726,
12216027-12216043,12217143-12217257,12217431-12218659
Length = 682
Score = 30.7 bits (66), Expect = 1.5
Identities = 17/43 (39%), Positives = 26/43 (60%)
Frame = +1
Query: 382 LLRDLQRLSEDIDTADIVFILGANEEKCYAHRIILIARCKSFQ 510
L + L L + +D +D+VF +G EE+ AHR +L AR F+
Sbjct: 478 LHQHLGNLLDSMDGSDVVFEVG--EERFSAHRCVLAARSSVFK 518
>08_01_0799 + 7734031-7735102,7735453-7735475
Length = 364
Score = 29.5 bits (63), Expect = 3.5
Identities = 17/50 (34%), Positives = 27/50 (54%)
Frame = +1
Query: 382 LLRDLQRLSEDIDTADIVFILGANEEKCYAHRIILIARCKSFQYTKRGEI 531
L + L E + +D+ F++G EK AH+IIL AR F+ G++
Sbjct: 177 LSENFGELLEKGEGSDVTFVVGG--EKIAAHKIILAARSSVFKAELYGQM 224
>05_03_0604 -
16132173-16132391,16132488-16132556,16132824-16132898,
16132981-16133113,16133188-16133297,16133360-16133407,
16133657-16133983,16135006-16135233,16135360-16135689,
16135780-16136586
Length = 781
Score = 29.5 bits (63), Expect = 3.5
Identities = 18/73 (24%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = +1
Query: 298 IVWNFVSMANRVPGTCCAASVERAGLPGL-LRDLQRLSEDIDTADIVFILGANEEKCYAH 474
I+W+ + A P + ++ GL R L E+ D +D +F++G+ + AH
Sbjct: 166 ILWSQIECAYVEPDGAGGHTRKQESKDGLDQRALANFLENWDFSDSIFVVGSERKVVPAH 225
Query: 475 RIILIARCKSFQY 513
+++L C F +
Sbjct: 226 KVVL-GSCGDFPF 237
>10_06_0142 -
11175732-11176545,11176924-11177450,11177544-11177761,
11177916-11177961,11178203-11178253
Length = 551
Score = 29.1 bits (62), Expect = 4.6
Identities = 16/52 (30%), Positives = 30/52 (57%)
Frame = +2
Query: 416 SIQQTLCSYWERMKKNVTHIGSS*LQDAKVSSTQNVVKYVGSLXCTVTPSVG 571
S++ T C + + KN+ +S L ++ V++ Q+V ++GS C TP +G
Sbjct: 33 SVEFTECICFYGVSKNLVTYLTSVLHESNVNAAQSVSIWIGS--CFFTPLIG 82
>10_02_0166 -
6065088-6065093,6066671-6068544,6068643-6069548,
6069623-6069676,6069751-6069808
Length = 965
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 395 YKDYPKISIQQTLCSYWERMKKNVTHIG 478
YKD+P+ Q W+R K+ +T IG
Sbjct: 774 YKDFPEAFTWQAGPKVWQRRKRRITQIG 801
>10_02_0129 + 5584585-5584732,5586567-5586968,5587038-5587106,
5587181-5587234,5587309-5588214,5588313-5590283,
5590833-5591235,5591845-5591857
Length = 1321
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/28 (39%), Positives = 16/28 (57%)
Frame = +2
Query: 395 YKDYPKISIQQTLCSYWERMKKNVTHIG 478
YKD+P+ Q W+R K+ +T IG
Sbjct: 961 YKDFPEAFTWQAGPKVWQRRKRRITQIG 988
>08_02_1367 +
26432425-26432622,26434071-26434162,26434337-26434403,
26434519-26434638,26434792-26435023,26435525-26435606,
26435985-26436117,26436332-26436537,26436633-26436758,
26437208-26437907
Length = 651
Score = 29.1 bits (62), Expect = 4.6
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 376 PGLLRDLQRLSEDIDTADIVFILG 447
PG L RL ED+D DIVF +G
Sbjct: 322 PGSLNTTDRLVEDLDNYDIVFHIG 345
>07_01_0456 -
3461827-3462261,3462542-3462670,3462777-3462897,
3463004-3463086,3463087-3463124,3463219-3464153,
3464407-3464655,3464738-3465195,3465793-3465885,
3466402-3466650
Length = 929
Score = 29.1 bits (62), Expect = 4.6
Identities = 11/14 (78%), Positives = 12/14 (85%)
Frame = +3
Query: 330 SPRDMLCSFCRKGR 371
SPRD+LCSFCR R
Sbjct: 386 SPRDLLCSFCRLHR 399
>04_04_1221 + 31845938-31847038
Length = 366
Score = 29.1 bits (62), Expect = 4.6
Identities = 18/74 (24%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Frame = +2
Query: 587 IRMPHIQPETFRLFIQYVYTGKL--LLQD--SGVFEMMTLAAD-LGGXRFAVCLRXXVTS 751
I++ ++PE F + ++YT +L +D + + + +AAD G R + ++
Sbjct: 235 IKIDDMEPEVFEALLHFIYTDRLPDSCRDGKAAAMQHLLVAADRYGVDRLRLICERRLSE 294
Query: 752 TLSVXSACTLLAVA 793
T+ V + T L +A
Sbjct: 295 TIDVETVATTLVLA 308
>10_08_0122 - 14982676-14983043,14983957-14985145
Length = 518
Score = 28.7 bits (61), Expect = 6.1
Identities = 18/53 (33%), Positives = 23/53 (43%), Gaps = 1/53 (1%)
Frame = +1
Query: 277 NKILSRKIVW-NFVSMANRVPGTCCAASVERAGLPGLLRDLQRLSEDIDTADI 432
NK+ R W N + + G C R G RDL ED+DTAD+
Sbjct: 380 NKVDIRIQPWQNSNARCGKAAGADCRGRQARRERGGRRRDLAAEREDVDTADV 432
>08_01_0803 - 7771507-7772184,7772238-7772325,7772440-7772546
Length = 290
Score = 28.7 bits (61), Expect = 6.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +2
Query: 569 GGQPIPIRMPHIQPETFRLFIQYVYTGKLLLQD 667
G Q +PI+ IQP+ F+ + ++YT L + D
Sbjct: 156 GAQVLPIK--DIQPDVFKALLHFIYTDSLSIID 186
>10_01_0051 -
741031-741820,742998-743530,743616-743833,743941-744043,
744239-744318,744719-744725
Length = 576
Score = 28.3 bits (60), Expect = 8.1
Identities = 14/48 (29%), Positives = 28/48 (58%)
Frame = +2
Query: 428 TLCSYWERMKKNVTHIGSS*LQDAKVSSTQNVVKYVGSLXCTVTPSVG 571
T C + + KN+ +S LQ++ V++ ++V ++G+ C TP +G
Sbjct: 68 TQCLCFSAVVKNLVRYLTSVLQESNVNAARSVSTWIGT--CFFTPLIG 113
>07_01_0322 -
2258067-2258519,2258620-2258781,2258896-2259159,
2259196-2259294,2259723-2260131,2260223-2260350,
2261115-2261181,2262766-2262838,2262911-2263130
Length = 624
Score = 28.3 bits (60), Expect = 8.1
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = +1
Query: 331 VPGTCCAASVERAGLPGL 384
+PG CCA + E AG+P L
Sbjct: 1 MPGPCCAGATEAAGVPWL 18
>05_01_0599 +
5368091-5368123,5368212-5368383,5369237-5369335,
5369636-5369748,5369824-5369916,5370081-5370244,
5370328-5370564,5370739-5370883,5370982-5371160,
5371997-5372142,5372239-5372366,5372441-5372614,
5372706-5372735,5373219-5373380,5373460-5373705,
5373733-5373870,5373974-5374174,5374304-5374448,
5374575-5374681,5374830-5374970,5375274-5375539,
5375621-5375745,5375843-5376109,5376250-5376263
Length = 1174
Score = 28.3 bits (60), Expect = 8.1
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +1
Query: 382 LLRDLQRLSE--DIDTADIVFILGANEEKCYAHRIILIARCKSFQYTKRGEICRVPGLYG 555
+L D L+E D+D ++V +L A+ +K RI+ + Y K + C + G G
Sbjct: 511 MLLDENPLTELTDMDGTNLVRMLRASAKKAVGERIVPATDNRKMYYNKGQKCCCLSGYLG 570
Query: 556 YAICWRTADTYTDA 597
I + T A
Sbjct: 571 LEILENSKHEITTA 584
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,466,581
Number of Sequences: 37544
Number of extensions: 407541
Number of successful extensions: 1038
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1000
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1038
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2326952232
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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