Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_K10
         (845 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0971 - 21949721-21949936,21950051-21950484,21950599-219507...    30   2.0  
11_06_0693 - 26334574-26336121                                         29   6.2  

>10_08_0971 -
           21949721-21949936,21950051-21950484,21950599-21950791,
           21950909-21951007,21951114-21951191,21951275-21951669,
           21954317-21954482,21954840-21954927,21955015-21955127,
           21955242-21955426,21955840-21955987,21956071-21956349,
           21956425-21956529,21956892-21957137,21957367-21957408,
           21957539-21957613
          Length = 953

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 14/35 (40%), Positives = 20/35 (57%)
 Frame = +1

Query: 586 VTNVKPTSTVANKPGAESTVTAEPYSLQWFVNHYS 690
           V+ +KP  T  N P A S++  EPY L W  ++ S
Sbjct: 595 VSAMKPKDTNVNGP-ASSSIKVEPYKLSWMQDYAS 628


>11_06_0693 - 26334574-26336121
          Length = 515

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = +1

Query: 154 CCVSDPPSPDQGRLDSRIHLTGPPPXAV 237
           C  S PPSP    L + + L+ PPP A+
Sbjct: 54  CLPSSPPSPHHHSLAALLLLSSPPPPAL 81


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,886,102
Number of Sequences: 37544
Number of extensions: 428341
Number of successful extensions: 1114
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1084
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2350456800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)