Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_K09
         (834 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0261 - 2007522-2007590,2007684-2007926,2008008-2008106,200...    30   2.0  
09_06_0187 + 21433842-21433887,21434504-21435246,21435437-214354...    30   2.6  
05_04_0183 - 18849749-18850225,18850305-18850431,18851762-18853515     29   3.5  
12_02_0017 - 12357029-12357070,12357434-12357503,12357722-123578...    29   4.6  
06_03_0143 + 17215975-17216745                                         29   6.0  
08_01_0541 + 4702930-4703328,4703411-4703506,4703601-4703649,470...    28   8.0  

>03_01_0261 - 2007522-2007590,2007684-2007926,2008008-2008106,
            2008214-2008693,2008806-2008904,2009097-2009218,
            2009296-2009414,2009492-2009559,2009832-2010017,
            2010323-2010425,2010477-2010556,2010638-2010694,
            2010771-2010913,2010988-2011132,2011501-2011662,
            2011759-2011944,2012273-2012365,2012893-2013053,
            2013440-2013547,2013664-2013928
          Length = 995

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 29/120 (24%), Positives = 51/120 (42%), Gaps = 1/120 (0%)
 Frame = +3

Query: 300  TKEKADSI-TTYLTNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNATFNYMRRPPIDAPA 476
            T+E A+ + ++ L +   + Y+  T GN +  ++ +  ST  P++ T  Y+  PP     
Sbjct: 694  TEEIAEVVKSSVLPDMFKSTYEAITKGNPMWNELSVSASTLYPWDPTSTYIHEPP----- 748

Query: 477  QHADDSMDPLDVPQGSTAPQRTARHGRYSRTEHVMTNGCIALKAPTFHWEPQHCGEIKDF 656
               D +M P   P+           G    T+H+   G I   +P   +  +   E KDF
Sbjct: 749  YFKDMTMSP-PGPRPVKDAYCLLNFGDSITTDHISPAGSIHPDSPAARYLKERGVERKDF 807


>09_06_0187 +
           21433842-21433887,21434504-21435246,21435437-21435484,
           21435929-21436814,21436967-21437056,21437543-21438417
          Length = 895

 Score = 29.9 bits (64), Expect = 2.6
 Identities = 11/22 (50%), Positives = 16/22 (72%)
 Frame = +3

Query: 204 FISRMNPYSPELNYFLSYQYCR 269
           FI R+  +SP++ YF SY+Y R
Sbjct: 190 FIGRLPEWSPDVRYFTSYEYPR 211


>05_04_0183 - 18849749-18850225,18850305-18850431,18851762-18853515
          Length = 785

 Score = 29.5 bits (63), Expect = 3.5
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
 Frame = +3

Query: 408 MSTGLP-FNATFNYMRRPPIDAPAQHADDSMDPLDVPQGSTAP 533
           +S GLP  +A F + R+PP  A     D     + +PQG+ AP
Sbjct: 304 LSDGLPDVDAVFYFTRKPPTAAFDLRFDAEAPKVALPQGTMAP 346


>12_02_0017 -
           12357029-12357070,12357434-12357503,12357722-12357852,
           12358836-12358882,12359762-12360044,12360547-12362413,
           12362454-12362665
          Length = 883

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 12/32 (37%), Positives = 17/32 (53%)
 Frame = +3

Query: 456 PPIDAPAQHADDSMDPLDVPQGSTAPQRTARH 551
           P   AP++HA  S  P   P  ++AP  + RH
Sbjct: 75  PTPRAPSRHATPSSSPPSTPSSASAPPPSGRH 106


>06_03_0143 + 17215975-17216745
          Length = 256

 Score = 28.7 bits (61), Expect = 6.0
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = -1

Query: 558 TDHVGRCVVEQCFLVVRLEGPCCHQHAGQEHRWAVSACS 442
           T     C V  C+  VRL  P C   AG+  R    ACS
Sbjct: 196 TTAAAACDVPFCYCRVRLRRPACAAPAGRAARRLEKACS 234


>08_01_0541 +
           4702930-4703328,4703411-4703506,4703601-4703649,
           4703771-4703865
          Length = 212

 Score = 28.3 bits (60), Expect = 8.0
 Identities = 21/87 (24%), Positives = 33/87 (37%)
 Frame = +3

Query: 474 AQHADDSMDPLDVPQGSTAPQRTARHGRYSRTEHVMTNGCIALKAPTFHWEPQHCGEIKD 653
           A H D     LD   G +A    A H R S+   + T  C+ L       E +H  ++ D
Sbjct: 100 ASHLDSLKRRLDALHGDSARDLEASHSRISKRFKMQTQSCLQLADEA---EKEH-RKMAD 155

Query: 654 FICEQTRCYYYNYGSIPXXIRAGKAXI 734
            I E       +Y      ++A  + +
Sbjct: 156 KISEHAEAVKASYKKFVAEVQASTSRV 182


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,664,857
Number of Sequences: 37544
Number of extensions: 482158
Number of successful extensions: 1258
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1215
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1258
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2303447664
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)