SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= FWDP02_FL5_K09
         (834 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein.       34   0.55 
J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein.                   34   0.55 
DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein.     34   0.55 
BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C typ...    34   0.55 
AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C typ...    34   0.55 
AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C typ...    34   0.55 
AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C typ...    34   0.55 
BC142642-1|AAI42643.1|  498|Homo sapiens MRC1L1 protein protein.       32   2.9  
AJ973593-1|CAJ00537.1|  170|Homo sapiens polyglutamine binding p...    31   3.9  
AB041836-1|BAB16709.1|  170|Homo sapiens PQBP-1d protein.              31   3.9  
AB041832-2|BAB16703.1|  170|Homo sapiens PQBP1-1d protein.             31   3.9  
U17033-1|AAA70110.1| 1465|Homo sapiens 180 kDa transmembrane PLA...    31   5.1  
AC093873-2|AAY24190.1|  495|Homo sapiens unknown protein.              31   5.1  
BC139723-1|AAI39724.1|  567|Homo sapiens CLEC4F protein protein.       30   9.0  

>M93221-1|AAA60389.1| 1456|Homo sapiens mannose receptor protein.
          Length = 1456

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = +3

Query: 243 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 413
           +F S  +CR+LG  LAS   KE+  +I   +T +G Y+K  FW  G   G  ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729

Query: 414 TGLP 425
            G P
Sbjct: 730 DGSP 733



 Score = 31.9 bits (69), Expect = 2.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 585  NGCIALKAPTFHWEPQHCGEIKDFICEQTR 674
            N C+AL A +  W   HC   K +IC++ +
Sbjct: 1330 NDCVALHASSGFWSNIHCSSYKGYICKRPK 1359


>J05550-1|AAA59868.1| 1456|Homo sapiens M6PR protein.
          Length = 1456

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = +3

Query: 243 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 413
           +F S  +CR+LG  LAS   KE+  +I   +T +G Y+K  FW  G   G  ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729

Query: 414 TGLP 425
            G P
Sbjct: 730 DGSP 733



 Score = 31.9 bits (69), Expect = 2.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 585  NGCIALKAPTFHWEPQHCGEIKDFICEQTR 674
            N C+AL A +  W   HC   K +IC++ +
Sbjct: 1330 NDCVALHASSGFWSNIHCSSYKGYICKRPK 1359


>DQ663787-1|ABG47462.1| 1456|Homo sapiens mannose receptor protein.
          Length = 1456

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = +3

Query: 243 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 413
           +F S  +CR+LG  LAS   KE+  +I   +T +G Y+K  FW  G   G  ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729

Query: 414 TGLP 425
            G P
Sbjct: 730 DGSP 733



 Score = 31.9 bits (69), Expect = 2.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 585  NGCIALKAPTFHWEPQHCGEIKDFICEQTR 674
            N C+AL A +  W   HC   K +IC++ +
Sbjct: 1330 NDCVALHASSGFWSNIHCSSYKGYICKRPK 1359



 Score = 31.1 bits (67), Expect = 5.1
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 264 CRSLGLQLASFETKEKADSITTYLTNAGYNKYD-FWTSGNNLGTDMFLWMSTGLPFNATF 440
           CR  G  LAS  T E+ D I + L   GY   D  W   N++   M+   S G P   T 
Sbjct: 391 CRKEGGDLASIHTIEEFDFIISQL---GYEPNDELWIGLNDIKIQMYFEWSDGTPVTFT- 446

Query: 441 NYMRRPP 461
            ++R  P
Sbjct: 447 KWLRGEP 453


>BX255924-1|CAI15339.1| 1456|Homo sapiens mannose receptor, C type
           1-like 1 protein.
          Length = 1456

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = +3

Query: 243 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 413
           +F S  +CR+LG  LAS   KE+  +I   +T +G Y+K  FW  G   G  ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729

Query: 414 TGLP 425
            G P
Sbjct: 730 DGSP 733



 Score = 31.9 bits (69), Expect = 2.9
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 264 CRSLGLQLASFETKEKADSITTYLTNAGYNKYD-FWTSGNNLGTDMFLWMSTGLPFNATF 440
           CR  G  LAS  T E+ D I + L   GY   D  W   N++   M+   S G P   T 
Sbjct: 391 CRKEGSDLASIHTIEEFDFIISQL---GYEPNDELWIGLNDIKIQMYFEWSDGTPVTFT- 446

Query: 441 NYMRRPP 461
            ++R  P
Sbjct: 447 KWLRGEP 453



 Score = 31.9 bits (69), Expect = 2.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 585  NGCIALKAPTFHWEPQHCGEIKDFICEQTR 674
            N C+AL A +  W   HC   K +IC++ +
Sbjct: 1330 NDCVALHASSGFWSNIHCSSYKGYICKRPK 1359


>AL928729-2|CAH70733.1| 1456|Homo sapiens mannose receptor, C type 1
           protein.
          Length = 1456

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = +3

Query: 243 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 413
           +F S  +CR+LG  LAS   KE+  +I   +T +G Y+K  FW  G   G  ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729

Query: 414 TGLP 425
            G P
Sbjct: 730 DGSP 733



 Score = 31.9 bits (69), Expect = 2.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 585  NGCIALKAPTFHWEPQHCGEIKDFICEQTR 674
            N C+AL A +  W   HC   K +IC++ +
Sbjct: 1330 NDCVALHASSGFWSNIHCSSYKGYICKRPK 1359


>AL928580-1|CAH71176.1| 1456|Homo sapiens mannose receptor, C type
           1-like 1 protein.
          Length = 1456

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = +3

Query: 243 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 413
           +F S  +CR+LG  LAS   KE+  +I   +T +G Y+K  FW  G   G  ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729

Query: 414 TGLP 425
            G P
Sbjct: 730 DGSP 733



 Score = 31.9 bits (69), Expect = 2.9
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 264 CRSLGLQLASFETKEKADSITTYLTNAGYNKYD-FWTSGNNLGTDMFLWMSTGLPFNATF 440
           CR  G  LAS  T E+ D I + L   GY   D  W   N++   M+   S G P   T 
Sbjct: 391 CRKEGSDLASIHTIEEFDFIISQL---GYEPNDELWIGLNDIKIQMYFEWSDGTPVTFT- 446

Query: 441 NYMRRPP 461
            ++R  P
Sbjct: 447 KWLRGEP 453



 Score = 31.9 bits (69), Expect = 2.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 585  NGCIALKAPTFHWEPQHCGEIKDFICEQTR 674
            N C+AL A +  W   HC   K +IC++ +
Sbjct: 1330 NDCVALHASSGFWSNIHCSSYKGYICKRPK 1359


>AL139238-2|CAH70872.1| 1456|Homo sapiens mannose receptor, C type
           1-like 1 protein.
          Length = 1456

 Score = 34.3 bits (75), Expect = 0.55
 Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
 Frame = +3

Query: 243 YFLSYQYCRSLGLQLASFETKEKADSITTYLTNAG-YNKYDFWTSGNNLG--TDMFLWMS 413
           +F S  +CR+LG  LAS   KE+  +I   +T +G Y+K  FW  G   G  ++ F W S
Sbjct: 673 WFESRDFCRALGGDLASINNKEEQQTIWRLITASGSYHKL-FWL-GLTYGSPSEGFTW-S 729

Query: 414 TGLP 425
            G P
Sbjct: 730 DGSP 733



 Score = 31.9 bits (69), Expect = 2.9
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 264 CRSLGLQLASFETKEKADSITTYLTNAGYNKYD-FWTSGNNLGTDMFLWMSTGLPFNATF 440
           CR  G  LAS  T E+ D I + L   GY   D  W   N++   M+   S G P   T 
Sbjct: 391 CRKEGSDLASIHTIEEFDFIISQL---GYEPNDELWIGLNDIKIQMYFEWSDGTPVTFT- 446

Query: 441 NYMRRPP 461
            ++R  P
Sbjct: 447 KWLRGEP 453



 Score = 31.9 bits (69), Expect = 2.9
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +3

Query: 585  NGCIALKAPTFHWEPQHCGEIKDFICEQTR 674
            N C+AL A +  W   HC   K +IC++ +
Sbjct: 1330 NDCVALHASSGFWSNIHCSSYKGYICKRPK 1359


>BC142642-1|AAI42643.1|  498|Homo sapiens MRC1L1 protein protein.
          Length = 498

 Score = 31.9 bits (69), Expect = 2.9
 Identities = 23/67 (34%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
 Frame = +3

Query: 264 CRSLGLQLASFETKEKADSITTYLTNAGYNKYD-FWTSGNNLGTDMFLWMSTGLPFNATF 440
           CR  G  LAS  T E+ D I + L   GY   D  W   N++   M+   S G P   T 
Sbjct: 391 CRKEGSDLASIHTIEEFDFIISQL---GYEPNDELWIGLNDIKIQMYFEWSDGTPVTFT- 446

Query: 441 NYMRRPP 461
            ++R  P
Sbjct: 447 KWLRGEP 453


>AJ973593-1|CAJ00537.1|  170|Homo sapiens polyglutamine binding
           protein variant 1 protein.
          Length = 170

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
 Frame = +3

Query: 381 NLGTDMFLWMSTGLPFNA-TFNYMRRPPIDAPAQHADDSMDPLDVPQGSTAPQRTARHGR 557
           N  TD+  W+S   P +  T +  +    +A     D+ +DP+D    S AP+ T   G 
Sbjct: 67  NADTDLVSWLSPHDPNSVVTKSAKKLRSSNAAVSRKDEELDPMDPSSYSDAPRGTWSTGL 126

Query: 558 YSRTEHVMTNGCIALKAPTFHWEP 629
             R E   T        P F   P
Sbjct: 127 PKRNE-AKTGADTTAAGPLFQQRP 149


>AB041836-1|BAB16709.1|  170|Homo sapiens PQBP-1d protein.
          Length = 170

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
 Frame = +3

Query: 381 NLGTDMFLWMSTGLPFNA-TFNYMRRPPIDAPAQHADDSMDPLDVPQGSTAPQRTARHGR 557
           N  TD+  W+S   P +  T +  +    +A     D+ +DP+D    S AP+ T   G 
Sbjct: 67  NADTDLVSWLSPHDPNSVVTKSAKKLRSSNAAVSRKDEELDPMDPSSYSDAPRGTWSTGL 126

Query: 558 YSRTEHVMTNGCIALKAPTFHWEP 629
             R E   T        P F   P
Sbjct: 127 PKRNE-AKTGADTTAAGPLFQQRP 149


>AB041832-2|BAB16703.1|  170|Homo sapiens PQBP1-1d protein.
          Length = 170

 Score = 31.5 bits (68), Expect = 3.9
 Identities = 23/84 (27%), Positives = 33/84 (39%), Gaps = 1/84 (1%)
 Frame = +3

Query: 381 NLGTDMFLWMSTGLPFNA-TFNYMRRPPIDAPAQHADDSMDPLDVPQGSTAPQRTARHGR 557
           N  TD+  W+S   P +  T +  +    +A     D+ +DP+D    S AP+ T   G 
Sbjct: 67  NADTDLVSWLSPHDPNSVVTKSAKKLRSSNAAVSRKDEELDPMDPSSYSDAPRGTWSTGL 126

Query: 558 YSRTEHVMTNGCIALKAPTFHWEP 629
             R E   T        P F   P
Sbjct: 127 PKRNE-AKTGADTTAAGPLFQQRP 149


>U17033-1|AAA70110.1| 1465|Homo sapiens 180 kDa transmembrane PLA2
            receptor precursor protein.
          Length = 1465

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 567  TEHVMTNGCIALKAPTFHWEPQHCGEIKDFICE 665
            T++   + C+AL+ P   W+   C E K FIC+
Sbjct: 1348 TDYFKPHHCVALRIPEGLWQLSPCQEKKGFICK 1380


>AC093873-2|AAY24190.1|  495|Homo sapiens unknown protein.
          Length = 495

 Score = 31.1 bits (67), Expect = 5.1
 Identities = 12/33 (36%), Positives = 19/33 (57%)
 Frame = +3

Query: 567 TEHVMTNGCIALKAPTFHWEPQHCGEIKDFICE 665
           T++   + C+AL+ P   W+   C E K FIC+
Sbjct: 378 TDYFKPHHCVALRIPEGLWQLSPCQEKKGFICK 410


>BC139723-1|AAI39724.1|  567|Homo sapiens CLEC4F protein protein.
          Length = 567

 Score = 30.3 bits (65), Expect = 9.0
 Identities = 19/62 (30%), Positives = 29/62 (46%)
 Frame = +3

Query: 258 QYCRSLGLQLASFETKEKADSITTYLTNAGYNKYDFWTSGNNLGTDMFLWMSTGLPFNAT 437
           Q+C S G  LAS  +KE+   +  +      +K  +W    + GT+     + G PFNA 
Sbjct: 495 QFCVSQGAHLASVASKEEQAFLVEFT-----SKVYYWIGLTDRGTEGSWRWTDGTPFNAA 549

Query: 438 FN 443
            N
Sbjct: 550 QN 551


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 113,316,282
Number of Sequences: 237096
Number of extensions: 2594384
Number of successful extensions: 10717
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 10169
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10716
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 10482413384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

- SilkBase 1999-2023 -